Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18] 11,198 sequences; 536,949,264 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq1360 82.4 6e-11 >seq1360 Length=99280 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||||||||| || |||||| ||||||| ||||| |||||| | || || ||||| Sbjct 35316 ATGCAGATATTCGTGAAAACCCTAACCGGGAAAACCATAACCCTAGAGGTTGAATCCTCA 35257 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | || | ||| ||| || || | || |||||| | || |||||| Sbjct 35256 GACACGATCGACAATGTGAAGACTAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 35197 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || ||| | |||| || || ||||| || ||||| | ||| | ||| |||| | Sbjct 35196 CAGCGTCTGATATTCGCCGGAAAACAGCTCGAAGACGGCCGGACACTCGCCGACTACAAC 35137 Query 25012 ATACAGAAAGAGGCCACGCTTCA 25034 || ||||| ||| | || ||||| Sbjct 35136 ATCCAGAAGGAGTCGACCCTTCA 35114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418246911700160