Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq1360 82.4 6e-11
>seq1360
Length=99280
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
||||||||||| || |||||| ||||||| ||||| |||||| | || || |||||
Sbjct 35316 ATGCAGATATTCGTGAAAACCCTAACCGGGAAAACCATAACCCTAGAGGTTGAATCCTCA 35257
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|||| | || | ||| ||| || || | || |||||| | || ||||||
Sbjct 35256 GACACGATCGACAATGTGAAGACTAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 35197
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
|| ||| | |||| || || ||||| || ||||| | ||| | ||| |||| |
Sbjct 35196 CAGCGTCTGATATTCGCCGGAAAACAGCTCGAAGACGGCCGGACACTCGCCGACTACAAC 35137
Query 25012 ATACAGAAAGAGGCCACGCTTCA 25034
|| ||||| ||| | || |||||
Sbjct 35136 ATCCAGAAGGAGTCGACCCTTCA 35114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418246911700160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |