Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18] 11,198 sequences; 536,949,264 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq3991 87.8 2e-12 >seq3991 Length=39150 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/105 (79%), Gaps = 1/105 (1%) Strand=Plus/Minus Query 13871 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13930 ||| ||||||||||| || ||||| |||||||| ||||| ||||| || | ||||| Sbjct 4555 ACAGGCAAAATCACAGTGTAGGCCTTCATCTCTTGATATAAGCTCGTTCGAGTAAGTTAA 4496 Query 13931 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAA 13975 || ||||||| |||| ||||| ||||||||||| ||| |||| Sbjct 4495 ACCAGGCATCATGCCTCTCTTTTTAAACCAAAATATGGCA-CAAA 4452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479660850073200