Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq3991 87.8 2e-12
>seq3991
Length=39150
Score = 87.8 bits (96), Expect = 2e-12
Identities = 83/105 (79%), Gaps = 1/105 (1%)
Strand=Plus/Minus
Query 13871 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13930
||| ||||||||||| || ||||| |||||||| ||||| ||||| || | |||||
Sbjct 4555 ACAGGCAAAATCACAGTGTAGGCCTTCATCTCTTGATATAAGCTCGTTCGAGTAAGTTAA 4496
Query 13931 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAA 13975
|| ||||||| |||| ||||| ||||||||||| ||| ||||
Sbjct 4495 ACCAGGCATCATGCCTCTCTTTTTAAACCAAAATATGGCA-CAAA 4452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479660850073200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |