Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1427 141 2e-28
seq355 141 2e-28
seq51 134 3e-26
seq6 127 5e-24
seq319 122 2e-22
seq2834 120 7e-22
seq1360 109 1e-18
seq981 86.0 1e-11
>seq1427
Length=108667
Score = 141 bits (156), Expect = 2e-28
Identities = 161/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || || || ||||| || || ||||| | || ||| | || ||
Sbjct 17813 AAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTAAAGTGCGGCCATC 17754
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| || |||||||| || || || || | ||||| || || || || |||||||| ||
Sbjct 17753 TTCGAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCTTCTTTGTC 17694
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||| ||||| ||||| ||||| || | ||||||| | ||| |||||||| || || ||
Sbjct 17693 CTGGATCTTGGCTTTGACATTGTCGATGGTATCGGAGGATTCGACCTCTAGGGTTATGGT 17634
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
||||| || || ||||| || || |||||||||||
Sbjct 17633 TTTACCCGTTAGGGTTTTCACGAAGATCTGCATTTT 17598
>seq355
Length=215899
Score = 141 bits (156), Expect = 2e-28
Identities = 174/237 (73%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382
||||| ||||| ||||||| | ||||| ||||| | || || || |||||||| |
Sbjct 205076 TATTTGCATTCCACCTCTTAAACGGAGTACAAGATGGAGCGTTGACTCCTTCTGAATGGT 205017
Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442
|| |||| || || | || || || || || ||||||||||| || || ||||||||
Sbjct 205016 GTAATCAGCAAGGGTGCGCCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTG 204957
Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502
||||| || || ||||| ||||| ||||| || | ||| ||||| || | ||| |||
Sbjct 204956 GTCAGGGGGAATGCCTTCCTTATCTTGAATTTTGGTTTTGACATTGTCAATGGTGTCGGA 204897
Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| ||||| || || || ||||| || || || || || ||||| ||||||||
Sbjct 204896 GCTTTCAACCTCAAGGGTGATTGTCTTCCCGGTGAGGGTCTTCACAAAGATCTGCAT 204840
Score = 140 bits (154), Expect = 7e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| |||||||| || | || || || || | || ||||||||||||||||| ||||||
Sbjct 204385 ATCCCCCCTCTAAGACGGAGAACAAGGTGGAGGGTCGATTCTTTCTGAATATTGTAGTCA 204326
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || ||||| || || || || || ||||||||||| || || | ||| || || ||
Sbjct 204325 GCGAGCGTTCTGCCATCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCTGGG 204266
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| ||||| || ||||| |||||||| | || ||||| || | ||| || | ||
Sbjct 204265 GGAATTCCCTCCTTATCTTGAATCTTCGTCTTAACATTGTCGATGGTGTCAAAACTCTCA 204206
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || || || || ||||| || || ||||| || |||||
Sbjct 204205 ACCTCGAGAGTTATGGTTTTTCCGGTAAGAGTCTTAACAAAGATTTGCAT 204156
Score = 129 bits (142), Expect = 1e-24
Identities = 172/238 (72%), Gaps = 2/238 (1%)
Strand=Plus/Minus
Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382
||||| ||||| ||||||| | ||| || | || | |||||| || || || |||||
Sbjct 205304 TATTTGCATTCCTCCTCTTAAACGAAGCACCAAGTGAAGTGTAGACTCCTTTTGGATATT 205245
Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442
||||||| || || || || || || || || || || ||||| |||| ||| || ||
Sbjct 205244 GTAGTCAGCAAGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAGATTAACCTTTGCTG 205185
Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502
||| || || || || || ||||| ||||||||||| || ||||| || | ||| ||
Sbjct 205184 ATCTGGGGGAATGCCCTCCTTATCTTGAATCTTTGCCTTGACATTGTCAATGGTGTCTGA 205125
Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
| || ||||| | || || ||||| ||||| | || || || ||||| ||||||
Sbjct 205124 ACTCTCGACCTCCAAAGTGATCGTCTTCCCAGTCAAAGTCTTGACGAATATTTGCATT 205067
Score = 111 bits (122), Expect = 4e-19
Identities = 155/215 (72%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || ||||| |||||||| || ||||| | | ||| | || ||
Sbjct 205508 AAGGACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAAAGTGCGCCCATC 205449
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| | || || ||||||||||| | |||||| || || || || |||||||| || ||
Sbjct 205448 CTCCAACTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTGTC 205389
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525
||| ||||| | || ||||| || | ||||| || | || ||||| | || || |
Sbjct 205388 CTGTATCTTAGTCTTGACATTATCGATAGTATC-TGAGCTCTCAACCTCCAAGGTGATGG 205330
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
| || ||||| | ||||| |||||||| ||||||
Sbjct 205329 TTTTCCCAGTCAAGGTTTTAACAAATATTTGCATT 205295
>seq51
Length=574565
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || |||||||| |||||||| | ||||| | || || || || || || |||
Sbjct 463907 GTAGACTCCTTCTGAATGTTATAGTCTGCAAGAGTCCGGCCATCCTCAAGCTGCTTCCCA 463848
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| |||||||| || || || || || |||||||||||||| ||||| | ||
Sbjct 463847 GCAAAAATAAGCCTCTGCTGGTCCGGTGGGATCCCTTCTTTATCCTGGATCTTCGTCTTC 463788
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| || || ||| || || | || || ||||| || || || ||
Sbjct 463787 ACATTCTCAATGGTGTCAGAAGTTTCGACTTCCAAGGTGATCGTCTTGCCTGTTAGGGTC 463728
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 463727 TTGACAAAGATCTGCAT 463711
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | ||||| || || ||||| || || |||| | |||| ||| ||
Sbjct 464606 AGAACAAGATGGAGGGTAGACTCCTTTTGAATGTTGTAATCAGCCAAGGTTCGACCATCC 464547
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| | ||| || |||||||| || |||||||| || || || || || || || || |||
Sbjct 464546 TCCAATTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATACCCTCCTTGTCC 464487
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|||||||| | || ||||| || | ||||| || || ||||| || || ||||||
Sbjct 464486 TGAATCTTAGTCTTCACATTCTCAATTGTATCAGAAGTCTCAACCTCGAGGGTGATAGTC 464427
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || || || ||||| ||||||||
Sbjct 464426 TTCCCGGTGAGGGTCTTCACAAAGATCTGCAT 464395
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || || | || |||| || | || || || || || || || ||||||
Sbjct 463712 ATACCACCCCTCAGACGGAGGACTAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCA 463653
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| ||||||||| || || || | || || ||||| || || |||||||| || || ||
Sbjct 463652 GCTAGAGTTCTGCCATCATCCAACTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCCGGT 463593
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || || ||||||||||| || | || ||||| || | || || || ||
Sbjct 463592 GGGATACCCTCCTTATCCTGAATTTTGGTCTTGACATTCTCAATAGTGTCAGAAGTCTCC 463533
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || ||||| ||||| || ||||| ||||| || |||||
Sbjct 463532 ACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATTTGCAT 463483
Score = 114 bits (126), Expect = 3e-20
Identities = 166/233 (71%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || | || ||| || || || || |||||||| ||||||||||| || |||
Sbjct 464168 ATACCTCCCCTCAACCGAAGCACCAGGTGCAAAGTAGATTCCTTCTGAATATTGTAATCA 464109
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| | || || || || || | || || || ||||| || |||||||| || || ||
Sbjct 464108 GCCAATGTCCTTCCATCATCCAACTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGT 464049
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506
|| ||||| || || ||||||||||||| || || || || | || || ||| |
Sbjct 464048 GGAATTCCCTCCTTGTCCTGAATCTTTGTCTTAACGTTATCGATAGTGTCAGAGCT---T 463992
Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || || || || || ||||| || || || || || ||||||||
Sbjct 463991 TCAACTTCCAGGGTGATGGTTTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 463939
>seq6
Length=1196388
Score = 127 bits (140), Expect = 5e-24
Identities = 158/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || ||||||||||||||||| ||||||| | || | || ||
Sbjct 28350 AAGGACAAGGTGGAGGGTGGATTCTTTCTGAATATTGTAGTCAGCCAAGGTGCGTCCATC 28409
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| ||||| || || ||||| ||||| ||||| || || || || || || || |||||
Sbjct 28410 CTCGAGTTGCTTCCCTGCAAAGATTAGTCTCTGCTGGTCCGGGGGAATCCCCTCCTTATC 28469
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525
||| || || | ||| ||||| || || ||||| || | || ||||| || || || |
Sbjct 28470 CTGGATTTTAGTTTTCACATTATCGACAGTATC-TGAGCTCTCAACCTCCAGGGTGATGG 28528
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||| ||||| | || || ||||| ||||||||
Sbjct 28529 TCTTCCCAGTCAAAGTCTTGACAAAAATCTGCAT 28562
Score = 127 bits (140), Expect = 5e-24
Identities = 179/250 (72%), Gaps = 1/250 (0%)
Strand=Plus/Plus
Query 104310 AGTCTTTCCATACTTTATTTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATT 104369
||||||| || | || | ||||| || | || | ||| || | || | ||||| |
Sbjct 29910 AGTCTTTACAAAGATT-TGCATTCCACCACGAAGGCGAAGCACCAAGTGGAGAGTAGACT 29968
Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429
| ||||| || |||||||| | || |||| || || || || ||||| |||||||| |
Sbjct 29969 CCTTCTGGATGTTATAGTCTGCAAGGGTTCGGCCATCCTCGAGCTGTTTACCAGCAAAGA 30028
Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489
| || | ||| ||||| || || |||||||||||||| ||||| || | || ||||| |
Sbjct 30029 TCAGACGCTGCTGATCTGGGGGAATTCCTTCTTTATCTTGAATTTTGGTCTTCACATTAT 30088
Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549
| | ||||| | || ||||| || || || | ||| ||||| || ||||| ||||
Sbjct 30089 CAATCGTATCAGAACTCTCGACCTCAAGAGTTATGGACTTGCCAGTTAGGGTTTTGACAA 30148
Query 104550 ATATCTGCAT 104559
| || |||||
Sbjct 30149 AAATTTGCAT 30158
Score = 122 bits (134), Expect = 2e-22
Identities = 167/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| ||||||| | || || ||||| | || || || ||||| ||||| || |||
Sbjct 29017 ATTCCACCTCTTAATCGGAGAACAAGATGGAGGGTTGACTCCTTCTGGATATTGTAATCA 29076
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| ||||| | || || || || || || |||||||| || | |||||| ||||| ||
Sbjct 29077 GCAAGAGTACGCCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGG 29136
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| ||||| || || || ||||| || | || ||||| || | || ||| || | ||
Sbjct 29137 GGGATTCCCTCCTTGTCTTGAATTTTGGTCTTAACATTGTCAATAGTGTCGG-AGCTCTC 29195
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | ||||||||||| || || | ||||| ||||| || |||||
Sbjct 29196 AACCTCCAAAGTAATAGTCTTCCCTGTTAAAGTTTTCACAAAAATTTGCAT 29246
Score = 122 bits (134), Expect = 2e-22
Identities = 168/234 (72%), Gaps = 6/234 (3%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || |||| | || || ||||| | || || || ||||| || || || |||
Sbjct 29701 ATACCACCCCTTAATCGGAGCACAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCA 29760
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| ||||| | || || || || || || |||||||| || | |||||| ||||| ||
Sbjct 29761 GCAAGAGTACGTCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGG 29820
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506
|| ||||||||||| ||||||||||| | || ||||| || || || || ||| |
Sbjct 29821 GGGATTCCTTCTTTGTCCTGAATCTTGGTCTTAACATTGTCGACAGTGTCAGAGCT---T 29877
Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| ||||| | ||||| || || || || | || |||||||| || ||||||
Sbjct 29878 TCAACCTCCAAGGTAATTGTTTTTCCTGTCAAAGTCTTTACAAAGATTTGCATT 29931
Score = 104 bits (114), Expect = 5e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || |||| | || || ||||| | || || || ||||| || || || |||
Sbjct 29473 ATACCACCCCTTAATCGGAGAACAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCA 29532
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| ||||| | || || || || || || |||||||| || | |||||| ||||| ||
Sbjct 29533 GCAAGAGTACGTCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGG 29592
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| ||||| ||||| ||||||||||| | || ||||| || | || || || | ||
Sbjct 29593 GGAATTCCCTCTTTGTCCTGAATCTTAGTCTTAACATTGTCAATAGTGTC-TGAGCTCTC 29651
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | || || ||||| || || | || || ||||| || |||||
Sbjct 29652 AACCTCCAAAGTGATGGTCTTCCCTGTCAAAGTCTTCACAAAAATTTGCAT 29702
Score = 95.1 bits (104), Expect = 3e-14
Identities = 142/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || || || ||||| || || | || || || || || || || || || ||
Sbjct 28822 GTAGACTCCTTTTGGATATTGTAATCCGCAAGGGTCCTCCCATCATCAAGCTGCTTCCCG 28881
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | ||| || || || ||||| || ||||| || ||||||||||| |||||
Sbjct 28882 GCAAAGATCAACCTTTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGAATCTTGGCTTTG 28941
Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||||| || | || || || | || ||||| | || || ||||| || || | ||
Sbjct 28942 ACATTATCAATAGTGTC-AGAGCTCTCAACCTCCAAAGTGATGGTCTTCCCTGTCAAAGT 29000
Query 104542 TTTTACAAATATCTGCATT 104560
|| ||||| || ||||||
Sbjct 29001 CTTAACAAAAATTTGCATT 29019
>seq319
Length=213347
Score = 122 bits (134), Expect = 2e-22
Identities = 167/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || || | | || || | ||| | || || || ||||| || || ||||||
Sbjct 180999 ATTCCTCCCCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCA 180940
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| | ||| | || || || || || || ||||| ||||| | |||||| || || ||
Sbjct 180939 GCCAAAGTACGGCCATCCTCGAGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGGG 180880
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| || ||||| || ||||||||||| | || ||||| || | ||| ||| || | ||
Sbjct 180879 GGGATACCTTCCTTGTCCTGAATCTTGGTCTTAACATTGTCAATGGTGTCGG-AGCTCTC 180821
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | ||||| ||||| |||||||| || || || |||||||||||
Sbjct 180820 AACCTCCAAAGTAATGGTCTTCCCAGTAAGAGTCTTGACGAATATCTGCAT 180770
Score = 118 bits (130), Expect = 2e-21
Identities = 147/199 (74%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| ||||| || || | ||||| || || ||||| || || || ||
Sbjct 181194 GTTGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTTCCATCTTCCAGCTGCTTCCCG 181135
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | |||||| || || || || || ||||| || ||||||||||| || ||
Sbjct 181134 GCAAAAATCAACCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTGAATCTTCGCCTTG 181075
Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||||| || | ||| || | || | || ||||| || || || ||||| || || | ||
Sbjct 181074 ACATTGTCAATGGTGTC-CGAGCTCTCAACCTCGAGGGTGATGGTCTTTCCGGTCAAGGT 181016
Query 104542 TTTTACAAATATCTGCATT 104560
|| || || |||||||||
Sbjct 181015 CTTGACGAAAATCTGCATT 180997
>seq2834
Length=64598
Score = 120 bits (132), Expect = 7e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || || || ||||| || || ||||| | || ||| | || ||
Sbjct 920 AAGAACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCTAAAGTGCGGCCATC 861
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| || |||||||| || || || || | ||||| || || || || |||||||| ||
Sbjct 860 TTCGAGCTGTTTTCCGGCGAAGATGAGGCGTTGTTGGTCGGGTGGGATGCCTTCTTTGTC 801
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|| ||||| ||||| ||||| || | || || | ||| || ||||| || || ||
Sbjct 800 TTGGATCTTGGCTTTCACATTGTCGATTGTGTCAGAGGATTCGACTTCTAGGGTTATGGT 741
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
||||| || || ||||| || || |||||||||||
Sbjct 740 TTTACCCGTTAGGGTTTTCACGAAGATCTGCATTTT 705
>seq1360
Length=99280
Score = 109 bits (120), Expect = 1e-18
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 104334 CCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATA 104393
|||||| || | ||| || || || | || || || ||||| || || ||||| | |
Sbjct 35093 CCCCTC--AGACGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGA 35150
Query 104394 GAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTA 104453
| || | |||||||| || |||||||| || || || || | ||| || || || || |
Sbjct 35151 GTGTCCGGCCGTCTTCGAGCTGTTTTCCGGCGAATATCAGACGCTGCTGGTCTGGGGGAA 35210
Query 104454 TTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCT 104513
| ||||| || || || ||||| | || ||||| || | || || | ||| ||||
Sbjct 35211 TGCCTTCCTTGTCTTGGATCTTAGTCTTCACATTGTCGATCGTGTCTGAGGATTCAACCT 35270
Query 104514 CTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
|||| || || || || || || || ||||| || ||||||||||| ||
Sbjct 35271 CTAGGGTTATGGTTTTCCCGGTTAGGGTTTTCACGAATATCTGCATCTT 35319
>seq981
Length=126998
Score = 86.0 bits (94), Expect = 1e-11
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515
|||||||| || || ||||| || || ||||| || | |||||| || ||| |||||
Sbjct 115173 CCTTCTTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCACTGCTTTCGACCTCA 115114
Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
|| || || ||||||||||| || ||||| || || |||||||| ||
Sbjct 115113 AGGGTGATGGTCTTACCAGTTAGGGTTTTCACGAAGATCTGCATCTT 115067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151233203834184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |