Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18] 11,198 sequences; 536,949,264 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1427 141 2e-28 seq355 141 2e-28 seq51 134 3e-26 seq6 127 5e-24 seq319 122 2e-22 seq2834 120 7e-22 seq1360 109 1e-18 seq981 86.0 1e-11 >seq1427 Length=108667 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || ||||| || || ||||| | || ||| | || || Sbjct 17813 AAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTAAAGTGCGGCCATC 17754 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| || |||||||| || || || || | ||||| || || || || |||||||| || Sbjct 17753 TTCGAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCTTCTTTGTC 17694 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| ||||| ||||| ||||| || | ||||||| | ||| |||||||| || || || Sbjct 17693 CTGGATCTTGGCTTTGACATTGTCGATGGTATCGGAGGATTCGACCTCTAGGGTTATGGT 17634 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||||| || || ||||| || || ||||||||||| Sbjct 17633 TTTACCCGTTAGGGTTTTCACGAAGATCTGCATTTT 17598 >seq355 Length=215899 Score = 141 bits (156), Expect = 2e-28 Identities = 174/237 (73%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 ||||| ||||| ||||||| | ||||| ||||| | || || || |||||||| | Sbjct 205076 TATTTGCATTCCACCTCTTAAACGGAGTACAAGATGGAGCGTTGACTCCTTCTGAATGGT 205017 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 || |||| || || | || || || || || ||||||||||| || || |||||||| Sbjct 205016 GTAATCAGCAAGGGTGCGCCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTG 204957 Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502 ||||| || || ||||| ||||| ||||| || | ||| ||||| || | ||| ||| Sbjct 204956 GTCAGGGGGAATGCCTTCCTTATCTTGAATTTTGGTTTTGACATTGTCAATGGTGTCGGA 204897 Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| || || || ||||| || || || || || ||||| |||||||| Sbjct 204896 GCTTTCAACCTCAAGGGTGATTGTCTTCCCGGTGAGGGTCTTCACAAAGATCTGCAT 204840 Score = 140 bits (154), Expect = 7e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || |||||||| || | || || || || | || ||||||||||||||||| |||||| Sbjct 204385 ATCCCCCCTCTAAGACGGAGAACAAGGTGGAGGGTCGATTCTTTCTGAATATTGTAGTCA 204326 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || ||||| || || || || || ||||||||||| || || | ||| || || || Sbjct 204325 GCGAGCGTTCTGCCATCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCTGGG 204266 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| || ||||| |||||||| | || ||||| || | ||| || | || Sbjct 204265 GGAATTCCCTCCTTATCTTGAATCTTCGTCTTAACATTGTCGATGGTGTCAAAACTCTCA 204206 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || || || || ||||| || || ||||| || ||||| Sbjct 204205 ACCTCGAGAGTTATGGTTTTTCCGGTAAGAGTCTTAACAAAGATTTGCAT 204156 Score = 129 bits (142), Expect = 1e-24 Identities = 172/238 (72%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 ||||| ||||| ||||||| | ||| || | || | |||||| || || || ||||| Sbjct 205304 TATTTGCATTCCTCCTCTTAAACGAAGCACCAAGTGAAGTGTAGACTCCTTTTGGATATT 205245 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 ||||||| || || || || || || || || || || ||||| |||| ||| || || Sbjct 205244 GTAGTCAGCAAGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAGATTAACCTTTGCTG 205185 Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502 ||| || || || || || ||||| ||||||||||| || ||||| || | ||| || Sbjct 205184 ATCTGGGGGAATGCCCTCCTTATCTTGAATCTTTGCCTTGACATTGTCAATGGTGTCTGA 205125 Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 | || ||||| | || || ||||| ||||| | || || || ||||| |||||| Sbjct 205124 ACTCTCGACCTCCAAAGTGATCGTCTTCCCAGTCAAAGTCTTGACGAATATTTGCATT 205067 Score = 111 bits (122), Expect = 4e-19 Identities = 155/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||| |||||||| || ||||| | | ||| | || || Sbjct 205508 AAGGACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAAAGTGCGCCCATC 205449 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || | || || ||||||||||| | |||||| || || || || |||||||| || || Sbjct 205448 CTCCAACTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTGTC 205389 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||| ||||| | || ||||| || | ||||| || | || ||||| | || || | Sbjct 205388 CTGTATCTTAGTCTTGACATTATCGATAGTATC-TGAGCTCTCAACCTCCAAGGTGATGG 205330 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 | || ||||| | ||||| |||||||| |||||| Sbjct 205329 TTTTCCCAGTCAAGGTTTTAACAAATATTTGCATT 205295 >seq51 Length=574565 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || |||||||| |||||||| | ||||| | || || || || || || ||| Sbjct 463907 GTAGACTCCTTCTGAATGTTATAGTCTGCAAGAGTCCGGCCATCCTCAAGCTGCTTCCCA 463848 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| |||||||| || || || || || |||||||||||||| ||||| | || Sbjct 463847 GCAAAAATAAGCCTCTGCTGGTCCGGTGGGATCCCTTCTTTATCCTGGATCTTCGTCTTC 463788 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || || ||| || || | || || ||||| || || || || Sbjct 463787 ACATTCTCAATGGTGTCAGAAGTTTCGACTTCCAAGGTGATCGTCTTGCCTGTTAGGGTC 463728 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 463727 TTGACAAAGATCTGCAT 463711 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | ||||| || || ||||| || || |||| | |||| ||| || Sbjct 464606 AGAACAAGATGGAGGGTAGACTCCTTTTGAATGTTGTAATCAGCCAAGGTTCGACCATCC 464547 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || | ||| || |||||||| || |||||||| || || || || || || || || ||| Sbjct 464546 TCCAATTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATACCCTCCTTGTCC 464487 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| | || ||||| || | ||||| || || ||||| || || |||||| Sbjct 464486 TGAATCTTAGTCTTCACATTCTCAATTGTATCAGAAGTCTCAACCTCGAGGGTGATAGTC 464427 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || ||||| |||||||| Sbjct 464426 TTCCCGGTGAGGGTCTTCACAAAGATCTGCAT 464395 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | || |||| || | || || || || || || || |||||| Sbjct 463712 ATACCACCCCTCAGACGGAGGACTAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCA 463653 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||||||| || || || | || || ||||| || || |||||||| || || || Sbjct 463652 GCTAGAGTTCTGCCATCATCCAACTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCCGGT 463593 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || ||||||||||| || | || ||||| || | || || || || Sbjct 463592 GGGATACCCTCCTTATCCTGAATTTTGGTCTTGACATTCTCAATAGTGTCAGAAGTCTCC 463533 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| ||||| || ||||| ||||| || ||||| Sbjct 463532 ACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATTTGCAT 463483 Score = 114 bits (126), Expect = 3e-20 Identities = 166/233 (71%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || | || ||| || || || || |||||||| ||||||||||| || ||| Sbjct 464168 ATACCTCCCCTCAACCGAAGCACCAGGTGCAAAGTAGATTCCTTCTGAATATTGTAATCA 464109 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | || || || || || | || || || ||||| || |||||||| || || || Sbjct 464108 GCCAATGTCCTTCCATCATCCAACTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGT 464049 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506 || ||||| || || ||||||||||||| || || || || | || || ||| | Sbjct 464048 GGAATTCCCTCCTTGTCCTGAATCTTTGTCTTAACGTTATCGATAGTGTCAGAGCT---T 463992 Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || || || ||||| || || || || || |||||||| Sbjct 463991 TCAACTTCCAGGGTGATGGTTTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 463939 >seq6 Length=1196388 Score = 127 bits (140), Expect = 5e-24 Identities = 158/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||||||||||||||| ||||||| | || | || || Sbjct 28350 AAGGACAAGGTGGAGGGTGGATTCTTTCTGAATATTGTAGTCAGCCAAGGTGCGTCCATC 28409 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || ||||| || || ||||| ||||| ||||| || || || || || || || ||||| Sbjct 28410 CTCGAGTTGCTTCCCTGCAAAGATTAGTCTCTGCTGGTCCGGGGGAATCCCCTCCTTATC 28469 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||| || || | ||| ||||| || || ||||| || | || ||||| || || || | Sbjct 28470 CTGGATTTTAGTTTTCACATTATCGACAGTATC-TGAGCTCTCAACCTCCAGGGTGATGG 28528 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| ||||| | || || ||||| |||||||| Sbjct 28529 TCTTCCCAGTCAAAGTCTTGACAAAAATCTGCAT 28562 Score = 127 bits (140), Expect = 5e-24 Identities = 179/250 (72%), Gaps = 1/250 (0%) Strand=Plus/Plus Query 104310 AGTCTTTCCATACTTTATTTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATT 104369 ||||||| || | || | ||||| || | || | ||| || | || | ||||| | Sbjct 29910 AGTCTTTACAAAGATT-TGCATTCCACCACGAAGGCGAAGCACCAAGTGGAGAGTAGACT 29968 Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 | ||||| || |||||||| | || |||| || || || || ||||| |||||||| | Sbjct 29969 CCTTCTGGATGTTATAGTCTGCAAGGGTTCGGCCATCCTCGAGCTGTTTACCAGCAAAGA 30028 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | || | ||| ||||| || || |||||||||||||| ||||| || | || ||||| | Sbjct 30029 TCAGACGCTGCTGATCTGGGGGAATTCCTTCTTTATCTTGAATTTTGGTCTTCACATTAT 30088 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 | | ||||| | || ||||| || || || | ||| ||||| || ||||| |||| Sbjct 30089 CAATCGTATCAGAACTCTCGACCTCAAGAGTTATGGACTTGCCAGTTAGGGTTTTGACAA 30148 Query 104550 ATATCTGCAT 104559 | || ||||| Sbjct 30149 AAATTTGCAT 30158 Score = 122 bits (134), Expect = 2e-22 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||||| | || || ||||| | || || || ||||| ||||| || ||| Sbjct 29017 ATTCCACCTCTTAATCGGAGAACAAGATGGAGGGTTGACTCCTTCTGGATATTGTAATCA 29076 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||| | || || || || || || |||||||| || | |||||| ||||| || Sbjct 29077 GCAAGAGTACGCCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGG 29136 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || ||||| || || || ||||| || | || ||||| || | || ||| || | || Sbjct 29137 GGGATTCCCTCCTTGTCTTGAATTTTGGTCTTAACATTGTCAATAGTGTCGG-AGCTCTC 29195 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | ||||||||||| || || | ||||| ||||| || ||||| Sbjct 29196 AACCTCCAAAGTAATAGTCTTCCCTGTTAAAGTTTTCACAAAAATTTGCAT 29246 Score = 122 bits (134), Expect = 2e-22 Identities = 168/234 (72%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || |||| | || || ||||| | || || || ||||| || || || ||| Sbjct 29701 ATACCACCCCTTAATCGGAGCACAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCA 29760 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||| | || || || || || || |||||||| || | |||||| ||||| || Sbjct 29761 GCAAGAGTACGTCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGG 29820 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506 || ||||||||||| ||||||||||| | || ||||| || || || || ||| | Sbjct 29821 GGGATTCCTTCTTTGTCCTGAATCTTGGTCTTAACATTGTCGACAGTGTCAGAGCT---T 29877 Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || ||||| | ||||| || || || || | || |||||||| || |||||| Sbjct 29878 TCAACCTCCAAGGTAATTGTTTTTCCTGTCAAAGTCTTTACAAAGATTTGCATT 29931 Score = 104 bits (114), Expect = 5e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || |||| | || || ||||| | || || || ||||| || || || ||| Sbjct 29473 ATACCACCCCTTAATCGGAGAACAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCA 29532 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||| | || || || || || || |||||||| || | |||||| ||||| || Sbjct 29533 GCAAGAGTACGTCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGG 29592 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || ||||| ||||| ||||||||||| | || ||||| || | || || || | || Sbjct 29593 GGAATTCCCTCTTTGTCCTGAATCTTAGTCTTAACATTGTCAATAGTGTC-TGAGCTCTC 29651 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | || || ||||| || || | || || ||||| || ||||| Sbjct 29652 AACCTCCAAAGTGATGGTCTTCCCTGTCAAAGTCTTCACAAAAATTTGCAT 29702 Score = 95.1 bits (104), Expect = 3e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || || || ||||| || || | || || || || || || || || || || Sbjct 28822 GTAGACTCCTTTTGGATATTGTAATCCGCAAGGGTCCTCCCATCATCAAGCTGCTTCCCG 28881 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | ||| || || || ||||| || ||||| || ||||||||||| ||||| Sbjct 28882 GCAAAGATCAACCTTTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGAATCTTGGCTTTG 28941 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || || | || ||||| | || || ||||| || || | || Sbjct 28942 ACATTATCAATAGTGTC-AGAGCTCTCAACCTCCAAAGTGATGGTCTTCCCTGTCAAAGT 29000 Query 104542 TTTTACAAATATCTGCATT 104560 || ||||| || |||||| Sbjct 29001 CTTAACAAAAATTTGCATT 29019 >seq319 Length=213347 Score = 122 bits (134), Expect = 2e-22 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || || | | || || | ||| | || || || ||||| || || |||||| Sbjct 180999 ATTCCTCCCCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCA 180940 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | ||| | || || || || || || ||||| ||||| | |||||| || || || Sbjct 180939 GCCAAAGTACGGCCATCCTCGAGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGGG 180880 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || ||||| || ||||||||||| | || ||||| || | ||| ||| || | || Sbjct 180879 GGGATACCTTCCTTGTCCTGAATCTTGGTCTTAACATTGTCAATGGTGTCGG-AGCTCTC 180821 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | ||||| ||||| |||||||| || || || ||||||||||| Sbjct 180820 AACCTCCAAAGTAATGGTCTTCCCAGTAAGAGTCTTGACGAATATCTGCAT 180770 Score = 118 bits (130), Expect = 2e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| ||||| || || | ||||| || || ||||| || || || || Sbjct 181194 GTTGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTTCCATCTTCCAGCTGCTTCCCG 181135 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | |||||| || || || || || ||||| || ||||||||||| || || Sbjct 181134 GCAAAAATCAACCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTGAATCTTCGCCTTG 181075 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | ||| || | || | || ||||| || || || ||||| || || | || Sbjct 181074 ACATTGTCAATGGTGTC-CGAGCTCTCAACCTCGAGGGTGATGGTCTTTCCGGTCAAGGT 181016 Query 104542 TTTTACAAATATCTGCATT 104560 || || || ||||||||| Sbjct 181015 CTTGACGAAAATCTGCATT 180997 >seq2834 Length=64598 Score = 120 bits (132), Expect = 7e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || ||||| || || ||||| | || ||| | || || Sbjct 920 AAGAACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCTAAAGTGCGGCCATC 861 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| || |||||||| || || || || | ||||| || || || || |||||||| || Sbjct 860 TTCGAGCTGTTTTCCGGCGAAGATGAGGCGTTGTTGGTCGGGTGGGATGCCTTCTTTGTC 801 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 || ||||| ||||| ||||| || | || || | ||| || ||||| || || || Sbjct 800 TTGGATCTTGGCTTTCACATTGTCGATTGTGTCAGAGGATTCGACTTCTAGGGTTATGGT 741 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||||| || || ||||| || || ||||||||||| Sbjct 740 TTTACCCGTTAGGGTTTTCACGAAGATCTGCATTTT 705 >seq1360 Length=99280 Score = 109 bits (120), Expect = 1e-18 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 104334 CCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATA 104393 |||||| || | ||| || || || | || || || ||||| || || ||||| | | Sbjct 35093 CCCCTC--AGACGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGA 35150 Query 104394 GAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTA 104453 | || | |||||||| || |||||||| || || || || | ||| || || || || | Sbjct 35151 GTGTCCGGCCGTCTTCGAGCTGTTTTCCGGCGAATATCAGACGCTGCTGGTCTGGGGGAA 35210 Query 104454 TTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCT 104513 | ||||| || || || ||||| | || ||||| || | || || | ||| |||| Sbjct 35211 TGCCTTCCTTGTCTTGGATCTTAGTCTTCACATTGTCGATCGTGTCTGAGGATTCAACCT 35270 Query 104514 CTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 |||| || || || || || || || ||||| || ||||||||||| || Sbjct 35271 CTAGGGTTATGGTTTTCCCGGTTAGGGTTTTCACGAATATCTGCATCTT 35319 >seq981 Length=126998 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515 |||||||| || || ||||| || || ||||| || | |||||| || ||| ||||| Sbjct 115173 CCTTCTTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCACTGCTTTCGACCTCA 115114 Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || || ||||||||||| || ||||| || || |||||||| || Sbjct 115113 AGGGTGATGGTCTTACCAGTTAGGGTTTTCACGAAGATCTGCATCTT 115067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151233203834184