Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq51 152 5e-32
seq319 136 4e-27
seq6 134 1e-26
seq355 129 5e-25
seq2834 104 2e-17
seq1427 104 2e-17
seq843 104 2e-17
seq338 104 2e-17
seq1360 86.0 6e-12
seq28 86.0 6e-12
>seq51
Length=574565
Score = 152 bits (168), Expect = 5e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
||||| ||||| || | ||||| |||||||||||||||||| || | || ||||| |
Sbjct 464165 CCTCCCCTCAACCGAAGCACCAGGTGCAAAGTAGATTCCTTCTGAATATTGTAATCAGCC 464106
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || | ||| |||| ||| || ||| ||||||| | || ||||| ||||| |||
Sbjct 464105 AATGTCCTTCCATCATCCAACTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGTGGA 464046
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| || || ||||| | ||| |||| ||| ||| ||| |||||||| | || ||
Sbjct 464045 ATTCCCTCCTTGTCCTGAATCTTTGTCTTAACGTTATCGATAGTGTCAGAGCTTTCAACT 463986
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | ||||||||||||||||| ||||| ||||| || ||||||||
Sbjct 463985 TCCAGGGTGATGGTTTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 463939
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| | || | |||||||||| || ||||||||||| | ||| ||||| |
Sbjct 464393 CCACCTCTGAGGCGGAGGACCAAGTGCAGGGTTGATTCCTTTTGGATGTTGTAATCAGCC 464334
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| || |||||||||||| || || ||||||| | || ||||| || || |||
Sbjct 464333 AAAGTCCTGCCATCCTCCAGCTGCTTCCCAGCAAAGATAATCCTCTGCTGGTCAGGTGGA 464274
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| || || || || | ||| || | ||| || | | | || || | | || ||
Sbjct 464273 ATGCCCTCCTTATCTTGAATCTTCGTCTTCACATTGTCAATTGTATCTGAGCTTTCAACT 464214
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | ||||||||||| ||||||||||| || || || ||||||||
Sbjct 464213 TCTAGGGTGATGGTTTTCCCAGTAAGAGTCTTAACGAAAATCTGCAT 464167
Score = 102 bits (112), Expect = 7e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCT 94839
|| || |||| || | || ||||| | ||| || |||||||| | ||| || || |||
Sbjct 463709 CCACCCCTCAGACGGAGGACTAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCT 463650
Query 94840 CATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGG 94899
| ||| || ||| |||| ||| || || | ||||| | || ||||| || || ||
Sbjct 463649 -AGAGTTCTGCCATCATCCAACTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCCGGTGG 463591
Query 94900 AATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGAC 94959
||||| || || || | |||||| | |||||| | | |||||||| || ||
Sbjct 463590 GATACCCTCCTTATCCTGAATTTTGGTCTTGACATTCTCAATAGTGTCAGAAGTCTCCAC 463531
Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | |||||||| || ||||| || |||||||||||||| |||||
Sbjct 463530 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATTTGCAT 463483
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
||||| ||||| || | ||||| |||| |||||| ||||| || | |||||| ||
Sbjct 463937 CCTCCCCTCAAACGGAGGACCAAATGCAGAGTAGACTCCTTCTGAATGTTATAGTCTGCA 463878
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | |||||| ||||| || || |||| || | || ||||| || || ||
Sbjct 463877 AGAGTCCGGCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCCGGTGGG 463818
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| |||||||| || | || || | ||| || | | ||||||| |||||
Sbjct 463817 ATCCCTTCTTTATCCTGGATCTTCGTCTTCACATTCTCAATGGTGTCAGAAGTTTCGACT 463758
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | ||||| || || || || || || || ||||||||||||||
Sbjct 463757 TCCAAGGTGATCGTCTTGCCTGTTAGGGTCTTGACAAAGATCTGCAT 463711
Score = 84.2 bits (92), Expect = 2e-11
Identities = 140/199 (70%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868
||||| |||||||| | ||| ||||| || || ||| || |||||||| || || |
Sbjct 464591 GTAGACTCCTTTTGAATGTTGTAATCAGCCA-AG-GTTCGACCATCCTCCAATTGCTTCC 464534
Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928
| ||||||| | || ||||| ||||| || ||||| || ||||| | ||| || | ||
Sbjct 464533 CAGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGAATCTTAGTCT 464474
Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988
| || | | || |||| || || || | ||||| || || || || || |
Sbjct 464473 TCACATTCTCAATTGTATCAGAAGTCTCAACCTCGAGGGTGATAGTCTTCCCGGTGAGGG 464414
Query 94989 TTTTCACAAAGATCTGCAT 95007
| |||||||||||||||||
Sbjct 464413 TCTTCACAAAGATCTGCAT 464395
>seq319
Length=213347
Score = 136 bits (150), Expect = 4e-27
Identities = 171/235 (73%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || |||||| || | || | ||| | ||| | ||| || ||||| || | ||| |
Sbjct 180548 TTTGCATTCCTCCCCTAAGACGGAGCACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGT 180489
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
| ||| | || | |||||| ||||| |||||| ||||||| | |||||||| |
Sbjct 180488 AGTCGGCGAGGGTTCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTTTGCTGGT 180429
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
|||| || || ||||| ||||| | |||||| ||||||||| | | | ||||| | |
Sbjct 180428 CTGGGGGGATTCCTTCCTTGTCTTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGC 180369
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || | ||||| || ||||| || || ||||| ||||||||||||||
Sbjct 180368 TTTCGACTTCGAGGGTGATTGTCTTTCCTGTTAGGGTTTTGACAAAGATCTGCAT 180314
Score = 131 bits (144), Expect = 2e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||| | ||||| ||||| || | ||| || ||| | |||| | ||||||
Sbjct 180751 CACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCCTC 180692
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| |||||| | ||||| || || ||||| ||||| |||||||| || ||||| |
Sbjct 180691 AAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTG 180632
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || |||||||| | | | || || | | ||||| |||| || ||||| ||
Sbjct 180631 AATCTTAGCCTTGACATTGTCAATGGTATCGGAGCTCTCGACTTCAAGGGTAATGGTCTT 180572
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || ||||| ||||||||||| |||||
Sbjct 180571 CCCTGTGAGAGTCTTCACAAAGATTTGCAT 180542
Score = 116 bits (128), Expect = 3e-21
Identities = 168/234 (72%), Gaps = 6/234 (3%)
Strand=Plus/Minus
Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836
|| |||||| || | || | ||| | ||| | ||| || |||||||| | ||| || ||
Sbjct 180316 CATTCCTCCCCTGAGACGGAGCACAAGGTGAAGAGTTGACTCCTTTTGAATGTTGTAGTC 180257
Query 94837 -GCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATC 94893
||| || ||| | ||||| |||||||||||| | ||||| | |||||||| ||
Sbjct 180256 AGCT---AGGGTTCGGCCGTCCTCTAGCTGTTTTCCGGCGAAGATCAGCCTTTGCTGGTC 180200
Query 94894 TGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG 94953
||| ||||| ||||| ||||| | || || | |||||| | | | ||||| |
Sbjct 180199 TGGGGGAATCCCTTCCTTGTCTTGGATCTTAGTCTTGACATTGTCAATGGTGTCGGAACT 180140
Query 94954 GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || | |||||||| ||||||||||| || || || ||||| |||||
Sbjct 180139 CTCGACCTCGAGAGTGATGGTCTTTCCAGTAAGGGTCTTAACGAAGATTTGCAT 180086
Score = 111 bits (122), Expect = 1e-19
Identities = 168/239 (70%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828
||| | | || |||||| ||||| || | |||||| || | ||| || ||||| || | |
Sbjct 181008 AAAATCTGCATTCCTCCCCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATG 180949
Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888
|| || || || ||| | |||||| ||||| || || | || || || || |||
Sbjct 180948 TTGTAGTCAGCCAAAGTACGGCCATCCTCGAGCTGCTTACCAGCGAAAATCAACCTCTGC 180889
Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948
|| ||||| || |||||||| ||||| | ||| || | ||| || | | | |||||
Sbjct 180888 TGGTCTGGGGGGATACCTTCCTTGTCCTGAATCTTGGTCTTAACATTGTCAATGGTGTCG 180829
Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| | || || || | || ||||| || ||||||||||| || || || ||||||||
Sbjct 180828 GAGCTCTCAACCTCCAAAGTAATGGTCTTCCCAGTAAGAGTCTTGACGAATATCTGCAT 180770
>seq6
Length=1196388
Score = 134 bits (148), Expect = 1e-26
Identities = 177/242 (73%), Gaps = 4/242 (2%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| | | || ||||||||||| |||| ||||||||| | ||||| |||||||| |
Sbjct 28779 AAAAATCTGCATCCCTCCTCTCAAGCGCAGCACCAAGTGAAGGGTAGACTCCTTTTGGAT 28838
Query 94828 GTTATAATCGCTCATAGTGT--TGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885
|| ||||| | || || || | ||| || ||||| || ||| ||||||| || |||
Sbjct 28839 ATTGTAATC-CGCA-AGGGTCCTCCCATCATCAAGCTGCTTCCCGGCAAAGATCAACCTT 28896
Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945
||||| || |||||||| ||||| ||||| | ||| || || ||||| | | ||||
Sbjct 28897 TGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGAATCTTGGCTTTGACATTATCAATAGTG 28956
Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005
|||| | || || || | |||||||| || || || | ||| || ||||| || |||
Sbjct 28957 TCAGAGCTCTCAACCTCCAAAGTGATGGTCTTCCCTGTCAAAGTCTTAACAAAAATTTGC 29016
Query 95006 AT 95007
||
Sbjct 29017 AT 29018
Score = 113 bits (124), Expect = 4e-20
Identities = 169/240 (70%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || || || || ||||| | ||| | || | || || ||||| || |
Sbjct 29691 AAAAATTTGCATACCACCCCTTAATCGGAGCACAAGATGGAGGGTTGACTCCTTCTGGAT 29750
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
||| ||||| | ||| |||||| ||||| || || ||||||| || || ||
Sbjct 29751 GTTGTAATCAGCAAGAGTACGTCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTG 29810
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
|||||| || || || ||||||||||| | ||| || | ||| || | ||||||||||
Sbjct 29811 CTGATCCGGGGGGATTCCTTCTTTGTCCTGAATCTTGGTCTTAACATTGTCGACAGTGTC 29870
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || || | || || |||||||| || | ||| || |||||||| |||||
Sbjct 29871 AGAGCTTTCAACCTCCAAGGTAATTGTTTTTCCTGTCAAAGTCTTTACAAAGATTTGCAT 29930
Score = 107 bits (118), Expect = 2e-18
Identities = 153/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855
||||||||| | |||||| ||||| || | |||||| || || || ||| | ||||
Sbjct 29949 CACCAAGTGGAGAGTAGACTCCTTCTGGATGTTATAGTCTG-CA-AGGGTTCGGCCATCC 30006
Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915
|| |||||||| || ||||||| | | ||||||||||| ||||| |||||||| ||
Sbjct 30007 TCGAGCTGTTTACCAGCAAAGATCAGACGCTGCTGATCTGGGGGAATTCCTTCTTTATCT 30066
Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975
| |||||| | ||| || | | || |||| ||||| |||| || ||||
Sbjct 30067 TGAATTTTGGTCTTCACATTATCAATCGTATCAGAACTCTCGACCTCAAGAGTTATGGAC 30126
Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| ||||| || ||||| ||||| || |||||
Sbjct 30127 TTGCCAGTTAGGGTTTTGACAAAAATTTGCAT 30158
Score = 104 bits (114), Expect = 2e-17
Identities = 167/240 (70%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || ||||| || ||||| | ||| | || | || |||||||| || |
Sbjct 29235 AAAAATTTGCATACCTCCCCTTAATCGGAGCACAAGATGGAGGGTTGATTCCTTCTGGAT 29294
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
|| ||||| | ||| |||||| ||||| || || ||||||| || || ||
Sbjct 29295 ATTGTAATCAGCAAGAGTACGCCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTG 29354
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
||||||||| || || || || ||||| | |||||| | ||| || | | | ||||||
Sbjct 29355 CTGATCTGGGGGGATTCCCTCCTTGTCTTGAATTTTGGTCTTAACATTGTCAATAGTGTC 29414
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| | || || || | |||||||| || || || | ||| |||||||| || |||||
Sbjct 29415 GGAGCTCTCAACCTCCAAAGTGATGGTCTTCCCTGTCAAAGTCTTCACAAAAATTTGCAT 29474
Score = 95.1 bits (104), Expect = 1e-14
Identities = 165/240 (69%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || ||| ||||| ||||| | || | || | || || ||||| || |
Sbjct 29007 AAAAATTTGCATTCCACCTCTTAATCGGAGAACAAGATGGAGGGTTGACTCCTTCTGGAT 29066
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
|| ||||| | ||| |||||| ||||| || || ||||||| || || ||
Sbjct 29067 ATTGTAATCAGCAAGAGTACGCCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTG 29126
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
||||||||| || || || || ||||| | |||||| | ||| || | | | ||||||
Sbjct 29127 CTGATCTGGGGGGATTCCCTCCTTGTCTTGAATTTTGGTCTTAACATTGTCAATAGTGTC 29186
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| | || || || | || || || || || || | |||||||||||| || |||||
Sbjct 29187 GGAGCTCTCAACCTCCAAAGTAATAGTCTTCCCTGTTAAAGTTTTCACAAAAATTTGCAT 29246
>seq355
Length=215899
Score = 129 bits (142), Expect = 5e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| | || | |||| ||| | || || ||||| || | ||| |||||
Sbjct 204838 CCACCTCTTAGACGGAGAACCAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGCA 204779
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| |||| | |||||| |||||||||||| ||||||| || || ||||| ||||| |||
Sbjct 204778 AGAGTGCGGCCATCCTCAAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGA 204719
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | ||||| | || || | | |||||||| | || ||
Sbjct 204718 ATACCTTCCTTGTCTTGGATTTTGGTTTTAACATTATCAATAGTGTCAGAGCTTTCAACC 204659
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|||| ||||| || || ||||| || || || ||||||||||||||||
Sbjct 204658 TCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTTACAAAGATCTGCATGC 204610
Score = 125 bits (138), Expect = 6e-24
Identities = 178/249 (71%), Gaps = 1/249 (0%)
Strand=Plus/Minus
Query 94760 GGTTTTTTAAAAT-TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTC 94818
|||||| |||| ||| || ||||||||| || || | ||||||||| | ||||| ||
Sbjct 205316 GGTTTTAACAAATATTTGCATTCCTCCTCTTAAACGAAGCACCAAGTGAAGTGTAGACTC 205257
Query 94819 CTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGAT 94878
|||||| | || || || | || | |||||| ||||| || || |||||||
Sbjct 205256 CTTTTGGATATTGTAGTCAGCAAGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAGAT 205197
Query 94879 TAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCC 94938
||| |||||||||||||| ||||| || || || || | ||| ||||||||||| | |
Sbjct 205196 TAACCTTTGCTGATCTGGGGGAATGCCCTCCTTATCTTGAATCTTTGCCTTGACATTGTC 205137
Query 94939 GACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998
| ||||| | ||||| || | ||||| || || ||||| | ||| || || ||
Sbjct 205136 AATGGTGTCTGAACTCTCGACCTCCAAAGTGATCGTCTTCCCAGTCAAAGTCTTGACGAA 205077
Query 94999 GATCTGCAT 95007
|| |||||
Sbjct 205076 TATTTGCAT 205068
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
|| || ||||| || | ||| ||||| | ||| | ||| || ||||| ||||||
Sbjct 204580 GTCGACTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGGCCATCTTCAAGCTGCTTTCCG 204521
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
||||||| || || ||||| ||||| ||||||||||| ||||| | |||||||| |||
Sbjct 204520 GCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGAATTTTTGTTTTG 204461
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990
||| | | |||||||| || || |||| ||||| || || || || || ||
Sbjct 204460 ACGTTATCAATAGTGTCAGAACTCTCAACTTCAAGGGTGATAGTCTTCCCGGTGAGGGTC 204401
Query 94991 TTCACAAAGATCTGCAT 95007
|| ||||| ||||||||
Sbjct 204400 TTAACAAAAATCTGCAT 204384
Score = 96.9 bits (106), Expect = 3e-15
Identities = 116/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
|||||| ||||| ||||| ||||||| | ||| || || || || ||||| ||||| ||
Sbjct 204995 ATCCTCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTGGTCAGGGGGAATGCCTTCCTT 204936
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
|| | |||||| | ||||| | | | ||||| | | || || |||| |||||
Sbjct 204935 ATCTTGAATTTTGGTTTTGACATTGTCAATGGTGTCGGAGCTTTCAACCTCAAGGGTGAT 204876
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| || || || || || |||||||||||||||||||
Sbjct 204875 TGTCTTCCCGGTGAGGGTCTTCACAAAGATCTGCATGC 204838
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
|| |||||||| || | ||| || || || |||| |||||||| ||| || ||
Sbjct 205492 GTGGATTCCTTCTGAATGTTGTAGTCTGCCAAAGTGCGCCCATCCTCCAACTGCTTACCA 205433
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
|||| || || || ||||| ||||| ||||| ||||| ||||| | || || | ||||
Sbjct 205432 GCAAAAATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTGTATCTTAGTCTTG 205373
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990
|| ||| ||| || | | || || || | ||||||||||| ||||| | |||
Sbjct 205372 ACATTATCGATAGTATCTGAGCTCTCAACCTCCAAGGTGATGGTTTTCCCAGTCAAGGTT 205313
Query 94991 TTCACAAAGATCTGCAT 95007
|| ||||| || |||||
Sbjct 205312 TTAACAAATATTTGCAT 205296
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
|||||||||||| ||||| ||||||| | | ||||| ||||| ||||| || || ||
Sbjct 204311 ATCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTT 204252
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
|| | ||| || | ||| || | ||| |||||| || || || | || ||
Sbjct 204251 ATCTTGAATCTTCGTCTTAACATTGTCGATGGTGTCAAAACTCTCAACCTCGAGAGTTAT 204192
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||||||| |||||||| || |||||||| |||||
Sbjct 204191 GGTTTTTCCGGTAAGAGTCTTAACAAAGATTTGCAT 204156
>seq2834
Length=64598
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
|| || ||||| || | ||| || ||| | |||| | ||| || ||||||||||||
Sbjct 904 GTTGACTCCTTCTGGATGTTGTAGTCGGCTAAAGTGCGGCCATCTTCGAGCTGTTTTCCG 845
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
| ||||| | | ||| || || || || || ||||||||||| | || || || ||
Sbjct 844 GCGAAGATGAGGCGTTGTTGGTCGGGTGGGATGCCTTCTTTGTCTTGGATCTTGGCTTTC 785
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990
|| | ||| ||||||| | ||||| || | || |||||||| || || || |||
Sbjct 784 ACATTGTCGATTGTGTCAGAGGATTCGACTTCTAGGGTTATGGTTTTACCCGTTAGGGTT 725
Query 94991 TTCACAAAGATCTGCAT 95007
||||| |||||||||||
Sbjct 724 TTCACGAAGATCTGCAT 708
>seq1427
Length=108667
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
|| || ||||| || | ||| || ||| | |||| | ||| || ||||||||||||
Sbjct 17797 GTGGACTCCTTCTGGATGTTGTAGTCGGCTAAAGTGCGGCCATCTTCGAGCTGTTTTCCG 17738
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
| ||||| | | ||| || ||||| || || ||||||||||| | || || || |||
Sbjct 17737 GCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCTTCTTTGTCCTGGATCTTGGCTTTG 17678
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990
|| | ||| || || | | ||||| || | || |||||||| || || || |||
Sbjct 17677 ACATTGTCGATGGTATCGGAGGATTCGACCTCTAGGGTTATGGTTTTACCCGTTAGGGTT 17618
Query 94991 TTCACAAAGATCTGCAT 95007
||||| |||||||||||
Sbjct 17617 TTCACGAAGATCTGCAT 17601
>seq843
Length=130910
Score = 104 bits (114), Expect = 2e-17
Identities = 156/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851
||| | ||||| || | || |||||||| || | ||| ||||| || ||||||
Sbjct 120345 TCGAAGCACCAGATGAAGCGTCGATTCCTTCTGAATGTTGTAATCTG-CA-AGTGTTCTT 120288
Query 94852 --ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909
||| |||| ||||| || |||||||||| | ||| |||||||| || || ||||||
Sbjct 120287 CCATCTTCCAATTGTTTCCCAGCAAAGATTAAGCGTTGTTGATCTGGTGGGATGCCTTCT 120228
Query 94910 TTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTG 94969
||||| | || || | ||||| | ||| ||||| | ||||| || | ||
Sbjct 120227 TTGTCTTGGATCTTGGTTTTGACATTGTCGATTGTGTCCGATGATTCGACTTCTAGGGTT 120168
Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||||||| ||||| || |||||||| || ||||||||
Sbjct 120167 ATGGTTTTCCCAGTTAGGGTTTTCACGAAAATCTGCAT 120130
>seq338
Length=211836
Score = 104 bits (114), Expect = 2e-17
Identities = 116/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| || || || |||||| | ||||| | | || ||||| || |||| |||||||||
Sbjct 171334 TCTTCAAGTTGCTTTCCGGCGAAGATGAGGCGCTGTTGATCGGGTTGAATGCCTTCTTTG 171393
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|||| |||||| |||||||| | || |||||| || || |||| ||||||
Sbjct 171394 TCATGAATTTTAGCCTTGACATTGTTGATGGTGTCACTAGATTCAACCTCAAGGGTGATG 171453
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || ||||||||||||||||| || |||||
Sbjct 171454 GTTTTACCCGTAAGAGTTTTCACAAATATTTGCAT 171488
>seq1360
Length=99280
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || |||| || | ||||| ||| | || || ||||| || | ||| || |||
Sbjct 35090 CCACCCCTCAGACGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 35149
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || | || || |||||||||||| | || || | | ||||| ||||| |||
Sbjct 35150 AGTGTCCGGCCGTCTTCGAGCTGTTTTCCGGCGAATATCAGACGCTGCTGGTCTGGGGGA 35209
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||| ||||| | || || | ||| || | ||| ||||| | | || ||
Sbjct 35210 ATGCCTTCCTTGTCTTGGATCTTAGTCTTCACATTGTCGATCGTGTCTGAGGATTCAACC 35269
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || |||||||| || || || |||||||| || ||||||||
Sbjct 35270 TCTAGGGTTATGGTTTTCCCGGTTAGGGTTTTCACGAATATCTGCAT 35316
>seq28
Length=745672
Score = 86.0 bits (94), Expect = 6e-12
Identities = 86/109 (79%), Gaps = 2/109 (2%)
Strand=Plus/Plus
Query 94900 AATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGT-CGA 94958
||||||||| ||||| | ||| || | ||||| | | | |||||| || || | | |
Sbjct 697731 AATACCTTCCTTGTCTTGAATCTTAGTTTTGACATTGTCAATAGTGTC-GCTTGATTCAA 697789
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| |||| |||||||| || |||||||||||||||||||||||||||||
Sbjct 697790 CTTCAAGGGTGATGGTCTTCCCAGTAAGAGTTTTCACAAAGATCTGCAT 697838
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448228450439280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |