Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq20 118 3e-21
>seq20
Length=765589
Score = 118 bits (130), Expect = 3e-21
Identities = 349/535 (65%), Gaps = 11/535 (2%)
Strand=Plus/Plus
Query 22433 TTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGTTCATTCGCGGAAC 22492
||||||| |||||||||||||| || ||||| | || || || || ||
Sbjct 521961 TTAAGAAGAAGGCAGATTGGGCTCTTCGTTGGATTGATGGTGCTGAATCGTTTGCTGAGA 522020
Query 22493 GTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCT 22552
| | ||||| |||||| |||||||| |||||||| |||||| || || | ||||
Sbjct 522021 GGTTGATTGCTTTTGCTTGTGTTGAAGGGATTTTCTTCTCTGGAAGTTTCTGCTCCATCT 522080
Query 22553 TTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCC 22612
| ||||| ||||| |||| | ||||||||| |||| || ||||| ||| | || |
Sbjct 522081 TCTGGCTCAAAAAGCGTGGGTTAATGCCGGGTTTAACCTTCTCAAACGAGCTGATATCGC 522140
Query 22613 GAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATA-TCATTCAT 22671
|||| || || ||||| |||||||| || ||||||| | | || | | |
Sbjct 522141 GAGACGAAGGGCTTCACTGTGATTTTGCCTGCCTGCTATA----CAGCTTACTGAAGAAG 522196
Query 22672 AAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTA 22731
|| || ||| | || | | || | | ||||||| ||| | || ||
Sbjct 522197 AAGCTGAGTGTTGAGAAGGTGCAGGGGATAGTAAAGGATGCAGTCGAAATCGAGCGAGAG 522256
Query 22732 TTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACA 22791
|| | ||| ||| | || || | || |||| || || || |||||
Sbjct 522257 TTCGTAACCGATGCGCTTCCGGTGAAGCTGGTTGGGATGAACTGTGAGCTGATGAGCCAG 522316
Query 22792 TATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAAC 22851
|| ||| | ||||||||||| | || || | |||| || | || |||| || ||
Sbjct 522317 TACATTGAGTTTGTTGCAGACAGGCTGTTGGCTGCACTTGGGTGTGAAAAGGTTT---AC 522373
Query 22852 GTCGTT---AATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTC 22908
| ||| || || || || |||||||| | || || ||| |||| ||||| ||||||
Sbjct 522374 GGAGTTCAGAACCCGTTCGATTGGATGGAGTTGATCTCTCTTCAAGGGAAGACTAATTTC 522433
Query 22909 TTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGATGCATTGAATG 22963
|| || || |||||||| || || || ||||| ||||||| | |||||||
Sbjct 522434 TTTGAGAAGAGAGTTGGGGAGTATCAGAAAGCTTCTGTTATGTCTAGCTTGAATG 522488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303166602156836
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |