Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq319 87.8 2e-12
>seq319
Length=213347
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/200 (71%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344
|||||| || ||||||||||| || || ||||| || || ||| ||||| || |
Sbjct 180313 AATGCAGATCTTTGTCAAAACCCTAACAGGAAAGACAATCACCCTCGAAGTCGAAAGCTC 180372
Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403
|||||| || ||||| || || |||||| || || ||||| ||||| || |
Sbjct 180373 CGACACCATT-GACAACGTCAAGGCCAAAATTCAAGACAAGGAAGGAATCCCCCCAGACC 180431
Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463
||||||| || || | ||| || || || | || |||| | |||| | ||||| || |
Sbjct 180432 AGCAAAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGAACCCTCGCCGACTACA 180491
Query 115464 ACATTCAAAAAGAGTCTACT 115483
|||| || || ||||| |||
Sbjct 180492 ACATCCAGAAGGAGTCCACT 180511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425285950911760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |