Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq2430 131 1e-25
seq240 122 6e-23
seq90 122 6e-23
seq356 118 7e-22
seq256 118 7e-22
seq2834 116 2e-21
seq6 116 2e-21
seq1360 114 9e-21
seq338 114 9e-21
seq13 114 9e-21
seq1893 113 3e-20
seq1427 113 3e-20
seq843 113 3e-20
seq78 113 3e-20
seq71 111 1e-19
seq1276 109 4e-19
seq143 109 4e-19
seq287 105 4e-18
seq319 104 2e-17
seq3909 102 5e-17
seq682 102 5e-17
seq51 102 5e-17
seq210 96.9 2e-15
seq181 93.3 3e-14
seq2 93.3 3e-14
seq355 91.5 1e-13
seq140 86.0 4e-12
>seq2430
Length=64440
Score = 131 bits (144), Expect = 1e-25
Identities = 86/95 (91%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||| ||||||||| |||| || ||||||||
Sbjct 38547 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 38488
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 38487 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 38453
>seq240
Length=257979
Score = 122 bits (134), Expect = 6e-23
Identities = 81/90 (90%), Gaps = 5/90 (6%)
Strand=Plus/Minus
Query 25907 CGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATC 25961
|||||||||||||||||||||||| ||||||||| |||| || |||||||||||||
Sbjct 98288 CGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATC 98229
Query 25962 CTTTCATGCGCGTCACTAATTAGATGACGA 25991
| ||||||||||||||||||||||||||||
Sbjct 98228 CATTCATGCGCGTCACTAATTAGATGACGA 98199
>seq90
Length=411380
Score = 122 bits (134), Expect = 6e-23
Identities = 84/95 (88%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|| ||||||||||||| |||||||||||| ||||||||| |||| || ||||||||
Sbjct 72866 AAACCCGTTCCCTTGGATGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 72925
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 72926 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 72960
>seq356
Length=218975
Score = 118 bits (130), Expect = 7e-22
Identities = 83/95 (87%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||| ||||||||| | || || ||||||||
Sbjct 165107 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACACGGACAGTGGGAATCTCGT 165166
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| |||||| ||||||||||||||||||||
Sbjct 165167 TAATCCATTCATGAACGTCACTAATTAGATGACGA 165201
Score = 118 bits (130), Expect = 7e-22
Identities = 83/95 (87%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||| ||||||||| ||||||||| |||| || ||||||||
Sbjct 181068 AAGCCCGTTCCCTTGGCTGAGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 181127
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||| ||||| ||||||||||||||
Sbjct 181128 TAATCCATTCATGCACGTCATTAATTAGATGACGA 181162
Score = 87.8 bits (96), Expect = 1e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||| |||||| |||||||| | |||||||||||||||||||||| |
Sbjct 166943 CTCTCTTTTCAAAGTCATTTTCATCTTTCCCTTGCTGTACTTGTTCGCTATCGGTCTCTC 166884
Query 20007 GGTAATATTTAGCCTT 20022
| | |||||||||||
Sbjct 166883 GCCAGTATTTAGCCTT 166868
>seq256
Length=242500
Score = 118 bits (130), Expect = 7e-22
Identities = 83/95 (87%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||| ||||||||||| |||||||||||||||||||| | |||| || ||||||||
Sbjct 149315 AAGCTCGTTCCCTTGGATGTGGTTTCGCTAGATAGTAAACAGGGACAGTGGGAATCTCGT 149256
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||| ||||||||||||||||||
Sbjct 149255 TAATCCATTCATGCGCATCACTAATTAGATGACGA 149221
>seq2834
Length=64598
Score = 116 bits (128), Expect = 2e-21
Identities = 150/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174
||||| || |||||| || || ||||| || | ||| || | || || | |||
Sbjct 910 TGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCTAAAGTGCGGCCATCTTCGAGCTGT 851
Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234
|||||||| || || ||||||||||| |||| |||| |||||||||||| || ||
Sbjct 850 TTTCCGGCGAAGATGAGGCGTTGTTGGTCGGGTGGGATGCCTTCTTTGTCTTGGATCTTG 791
Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294
|||||||| | || || || ||| ||||||| || || |||||||||||
Sbjct 790 GCTTTCACATTGTCGATTGTGTCAGAGGATTCGACTTCTAGGGTTATGGTTTTACCCGTT 731
Query 38295 AAGGTTTTCACGAATATCTGCATGTTT 38321
| |||||||||||| |||||||| |||
Sbjct 730 AGGGTTTTCACGAAGATCTGCATTTTT 704
>seq6
Length=1196388
Score = 116 bits (128), Expect = 2e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| || || || | ||| | ||| || || |||||| || || ||||||||||
Sbjct 29702 TACCACCCCTTAATCGGAGCACAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAG 29761
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | |||| | || || | || || || ||||| || | | || ||||| | ||
Sbjct 29762 CAAGAGTACGTCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGGG 29821
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| |||||||||||| ||| || ||| ||||| | |||||| || |||||||
Sbjct 29822 GGATTCCTTCTTTGTCCTGAATCTTGGTCTTAACATTGTCGACAGTGTCAGAGCTTTCAA 29881
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || || ||||| ||||| || ||||| || || || || || |||||
Sbjct 29882 CCTCCAAGGTAATTGTTTTTCCTGTCAAAGTCTTTACAAAGATTTGCAT 29930
Score = 98.7 bits (108), Expect = 7e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
|||||||| ||||| | |||||| ||||| || ||||||||| ||||||||||| | |
Sbjct 28564 CCACCTCTTAAACGGAGCACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAATCTG-C 28622
Query 38151 AAAACACGT-TCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|| | | | || || | || || ||||| || || | | || ||||| | |||
Sbjct 28623 AAGGGTCCTCCCATCCTCAAGCTGCTTCCCGGCGAAAATCAACCTCTGCTGATCAGGGGG 28682
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| ||| || |||||| || || ||| ||||| | | ||| ||| || |||||
Sbjct 28683 AATGCCCTCCTTGTCCTGGATCTTAGTCTTTACATTATCAATAGTGTCTGAGCTCTCAAC 28742
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || || || || || || |||||||| || || || ||||||||
Sbjct 28743 CTCCAAAGTGATGGTCTTCCCTGTCAAGGTCTTAACAAAAATCTGCAT 28790
Score = 95.1 bits (104), Expect = 8e-15
Identities = 161/232 (69%), Gaps = 1/232 (0%)
Strand=Plus/Plus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| |||||||| || || | || | ||| || || |||||| || ||||||||||
Sbjct 29016 CATT-CCACCTCTTAATCGGAGAACAAGATGGAGGGTTGACTCCTTCTGGATATTGTAAT 29074
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
||| | | ||| | || || | || || || ||||| || | | || ||||| |
Sbjct 29075 CAGCAAGAGTACGCCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTG 29134
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
||||| || || ||||| |||||| ||| ||||| | | ||| || || |
Sbjct 29135 GGGGGATTCCCTCCTTGTCTTGAATTTTGGTCTTAACATTGTCAATAGTGTCGGAGCTCT 29194
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| || || |||||||| || || || || |||||||| || || |||||
Sbjct 29195 CAACCTCCAAAGTAATAGTCTTCCCTGTTAAAGTTTTCACAAAAATTTGCAT 29246
Score = 89.7 bits (98), Expect = 3e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
|| |||||||| |||| |||||| ||||| || ||||||||| ||||||||||| | |
Sbjct 28792 CCTCCTCTCAAGCGCAGCACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAATCCG-C 28850
Query 38151 AAAACACGT-TCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|| | | | || || | || || |||||||| || | | ||| || || | ||
Sbjct 28851 AAGGGTCCTCCCATCATCAAGCTGCTTCCCGGCAAAGATCAACCTTTGCTGGTCCGGAGG 28910
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| |||||| |||||| ||| || || ||||| | | ||| || || |||||
Sbjct 28911 AATGCCTTCCTTGTCCTGAATCTTGGCTTTGACATTATCAATAGTGTCAGAGCTCTCAAC 28970
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || || || || || || ||||| || || || || || |||||
Sbjct 28971 CTCCAAAGTGATGGTCTTCCCTGTCAAAGTCTTAACAAAAATTTGCAT 29018
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186
|| || ||||||||||| |||| ||| ||| | || || | ||| || || |||||
Sbjct 28372 TCTTTCTGAATATTGTAGTCAGCCAAGGTGCGTCCATCCTCGAGTTGCTTCCCTGCAAAG 28431
Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246
||||| | || || || | ||| | || || || ||| ||||| ||||||||
Sbjct 28432 ATTAGTCTCTGCTGGTCCGGGGGAATCCCCTCCTTATCCTGGATTTTAGTTTTCACATTA 28491
Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306
| |||||||||| || ||||| || | || || || || || ||||| || || ||
Sbjct 28492 TCGACAGTATCTGAGCTCTCAACCTCCAGGGTGATGGTCTTCCCAGTCAAAGTCTTGACA 28551
Query 38307 AATATCTGCAT 38317
|| ||||||||
Sbjct 28552 AAAATCTGCAT 28562
>seq1360
Length=99280
Score = 114 bits (126), Expect = 9e-21
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||| |||| ||| | ||||| ||||| || |||||| || || ||||| || |
Sbjct 35089 ACCACCCCTCAGACGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGC 35148
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
| || |||| || | ||||||||||| ||||| || || || || || | |||
Sbjct 35149 GAGTGTCCGGCCGTCTTCGAGCTGTTTTCCGGCGAATATCAGACGCTGCTGGTCTGGGGG 35208
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| |||||| ||||| || || ||||||||| | || || ||| ||||||
Sbjct 35209 AATGCCTTCCTTGTCTTGGATCTTAGTCTTCACATTGTCGATCGTGTCTGAGGATTCAAC 35268
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|||| || || ||||| || || | ||||||||||||||||||||| ||
Sbjct 35269 CTCTAGGGTTATGGTTTTCCCGGTTAGGGTTTTCACGAATATCTGCATCTT 35319
>seq338
Length=211836
Score = 114 bits (126), Expect = 9e-21
Identities = 143/195 (73%), Gaps = 1/195 (1%)
Strand=Plus/Plus
Query 38128 CCTTT-TGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186
||||| || || |||||||| | | | ||| | ||| || | ||| |||||||| ||
Sbjct 171298 CCTTTCTGGATGTTGTAATCGGCTAGAGTACGGTTGTCTTCAAGTTGCTTTCCGGCGAAG 171357
Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246
|| ||||| |||||||||| | | |||||||||||| |||||| ||| |||||
Sbjct 171358 ATGAGGCGCTGTTGATCGGGTTGAATGCCTTCTTTGTCATGAATTTTAGCCTTGACATTG 171417
Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306
| || || || | | |||||| || | || || ||||||||||| | ||||||||
Sbjct 171418 TTGATGGTGTCACTAGATTCAACCTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTCACA 171477
Query 38307 AATATCTGCATGTTT 38321
||||| ||||| |||
Sbjct 171478 AATATTTGCATTTTT 171492
>seq13
Length=889999
Score = 114 bits (126), Expect = 9e-21
Identities = 81/93 (87%), Gaps = 5/93 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||| ||||||||| |||| || ||||||||
Sbjct 557595 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 557654
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989
|||||| |||||| | ||||||| |||||||||
Sbjct 557655 TAATCCATTCATGTGTGTCACTATTTAGATGAC 557687
>seq1893
Length=79788
Score = 113 bits (124), Expect = 3e-20
Identities = 82/95 (86%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||| |||||||||||||||||||||||| |||||||| |||| || ||||||||
Sbjct 25905 AAGCTCGTTCCCTTGGCTGTGGTTTCGCTGTATAGTAGAAAGGGACAGTGGGAATCTCGT 25964
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| ||| ||||||||||||||||||||||||||||
Sbjct 25965 TCATCGATTCATGCGCGTCACTAATTAGATGACGA 25999
>seq1427
Length=108667
Score = 113 bits (124), Expect = 3e-20
Identities = 149/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174
||||| ||| |||||| || || ||||| || | ||| || | || || | |||
Sbjct 17803 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTAAAGTGCGGCCATCTTCGAGCTGT 17744
Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234
|||||||| || || || |||||||| || | |||| ||||||||||||| || ||
Sbjct 17743 TTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCTTCTTTGTCCTGGATCTTG 17684
Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294
|| ||||| | || ||||| ||| || |||| || || |||||||||||
Sbjct 17683 GCTTTGACATTGTCGATGGTATCGGAGGATTCGACCTCTAGGGTTATGGTTTTACCCGTT 17624
Query 38295 AAGGTTTTCACGAATATCTGCATGTTT 38321
| |||||||||||| |||||||| |||
Sbjct 17623 AGGGTTTTCACGAAGATCTGCATTTTT 17597
>seq843
Length=130910
Score = 113 bits (124), Expect = 3e-20
Identities = 170/241 (71%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 38083 AATCAT--TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATT 38140
|||||| |||| || | | || | ||||| |||||| || ||||| ||||| ||
Sbjct 120366 AATCATGGTACCCCCACGAAGTCGAAGCACCAGATGAAGCGTCGATTCCTTCTGAATGTT 120307
Query 38141 GTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTG 38200
|||||| | | | | | || || |||||||| || ||||| |||| |||||||||
Sbjct 120306 GTAATCTGCAAGTGTTCTTCCATCTTCCAATTGTTTCCCAGCAAAGATTAAGCGTTGTTG 120247
Query 38201 ATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCC 38260
||| | |||| |||||||||||| || || || ||||| | || || ||
Sbjct 120246 ATCTGGTGGGATGCCTTCTTTGTCTTGGATCTTGGTTTTGACATTGTCGATTGTGTCCGA 120187
Query 38261 ACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
||| ||||||| || || ||||| || || | |||||||||||| |||||||| ||
Sbjct 120186 TGATTCGACTTCTAGGGTTATGGTTTTCCCAGTTAGGGTTTTCACGAAAATCTGCATCTT 120127
Query 38321 T 38321
|
Sbjct 120126 T 120126
>seq78
Length=453575
Score = 113 bits (124), Expect = 3e-20
Identities = 82/95 (86%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||| ||||||||||||||||||||||||| ||||| ||| |||| || ||||||||
Sbjct 301232 AAGTCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGGAGACAGGGACGGTGGGAATCTCGT 301291
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|| ||| ||| ||||||||||||||||||||||||
Sbjct 301292 TACTCCATTCGTGCGCGTCACTAATTAGATGACGA 301326
>seq71
Length=458239
Score = 111 bits (122), Expect = 1e-19
Identities = 81/94 (86%), Gaps = 4/94 (4%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG----GGTAATCTCGTT 25957
|||||| ||||||||| |||||||||||| |||||||| ||| || |||||||||
Sbjct 348795 AAGCCCTTTCCCTTGGTTGTGGTTTCGCTGGATAGTAGGCAGGACAGTGGGAATCTCGTT 348854
Query 25958 AATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
||||| |||||||||||| |||||||||||||||
Sbjct 348855 AATCCATTCATGCGCGTCGCTAATTAGATGACGA 348888
>seq1276
Length=108293
Score = 109 bits (120), Expect = 4e-19
Identities = 81/95 (85%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||| || ||||||||||||||||||| ||| |||| |||| || ||||||||
Sbjct 66487 AAGCCCATTTCCTTGGCTGTGGTTTCGCTGAATACTAGACAGGGACAGTGGGAATCTCGT 66546
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| |||||| |||||||||||||||||||||
Sbjct 66547 TAATCCATTCATGTGCGTCACTAATTAGATGACGA 66581
>seq143
Length=324058
Score = 109 bits (120), Expect = 4e-19
Identities = 81/93 (87%), Gaps = 5/93 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA-TAGGG----GGTAATCTCGT 25956
|||||||||||||||||||||| ||||| |||||||| |||| || ||||||||
Sbjct 140307 AAGCCCGTTCCCTTGGCTGTGGATTCGCCGGATAGTAGGCTAGGACAGTGGGAATCTCGT 140366
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989
|||||| ||||||||||||||||||||||||||
Sbjct 140367 TAATCCATTCATGCGCGTCACTAATTAGATGAC 140399
>seq287
Length=231413
Score = 105 bits (116), Expect = 4e-18
Identities = 76/88 (86%), Gaps = 5/88 (6%)
Strand=Plus/Minus
Query 25909 TTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGTTAATCCT 25963
|||||||||| ||||||| ||| ||||||||| ||||| | ||||||||||||||
Sbjct 132818 TTCCCTTGGCCGTGGTTTTGCTGGATAGTAGACAGGGGCAGTGGGAATCTCGTTAATCCA 132759
Query 25964 TTCATGCGCGTCACTAATTAGATGACGA 25991
||||||||||||||||||||||||| ||
Sbjct 132758 TTCATGCGCGTCACTAATTAGATGATGA 132731
>seq319
Length=213347
Score = 104 bits (114), Expect = 2e-17
Identities = 163/232 (70%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| || || |||||||| | ||||||||| |||||| |||||| || || ||||| |
Sbjct 181000 CATT-CCTCCCCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGT 180942
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
||| |||| ||| | || || | || || || || || || | | || || || |
Sbjct 180941 CAGCCAAAGTACGGCCATCCTCGAGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTG 180882
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
||||| ||||| |||||| ||| || ||| ||||| | | || || || |
Sbjct 180881 GGGGGATACCTTCCTTGTCCTGAATCTTGGTCTTAACATTGTCAATGGTGTCGGAGCTCT 180822
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| || || ||||| || || || || | || || ||||||||||||||
Sbjct 180821 CAACCTCCAAAGTAATGGTCTTCCCAGTAAGAGTCTTGACGAATATCTGCAT 180770
Score = 104 bits (114), Expect = 2e-17
Identities = 165/233 (71%), Gaps = 3/233 (1%)
Strand=Plus/Minus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| || || |||||||| | |||||| ||||| || |||||| || ||||||||||
Sbjct 181228 CATT-CCTCCCCTCAAACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATATTGTAAT 181170
Query 38146 CAGACAAAACACGTT-CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204
| | ||| | | || | || || | || || |||||||| || | | || || ||
Sbjct 181169 CCG-CAAGAGTCCTTCCATCTTCCAGCTGCTTCCCGGCAAAAATCAACCTCTGCTGGTCT 181111
Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264
| ||||| |||||| |||||| ||| || ||| ||||| | | || || ||
Sbjct 181110 GGGGGGATGCCTTCCTTGTCCTGAATCTTCGCCTTGACATTGTCAATGGTGTCCGAGCTC 181051
Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||| || | || || || || || |||||||| || ||||| ||||||||
Sbjct 181050 TCAACCTCGAGGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 180998
>seq3909
Length=40548
Score = 102 bits (112), Expect = 5e-17
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| |
Sbjct 34698 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 34757
Query 20007 GGTAATATTTAGCCTT 20022
| | |||||||||||
Sbjct 34758 GCCAGTATTTAGCCTT 34773
>seq682
Length=149632
Score = 102 bits (112), Expect = 5e-17
Identities = 73/84 (87%), Gaps = 5/84 (6%)
Strand=Plus/Minus
Query 25913 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCA 25967
||||| |||||||||||||||||||||| |||| || |||||||||||||| ||||
Sbjct 19008 CTTGGTTGTGGTTTCGCTAGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCA 18949
Query 25968 TGCGCGTCACTAATTAGATGACGA 25991
|| ||||||||||||||| |||||
Sbjct 18948 TGTGCGTCACTAATTAGACGACGA 18925
>seq51
Length=574565
Score = 102 bits (112), Expect = 5e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||| || ||||| || | ||||| || | ||| ||||| ||||||||||||||||
Sbjct 464167 TACCTCCCCTCAACCGAAGCACCAGGTGCAAAGTAGATTCCTTCTGAATATTGTAATCAG 464108
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| | | | || || || || || |||||||| || || | || || || | |
Sbjct 464107 CCAATGTCCTTCCATCATCCAACTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGTG 464048
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | || || |||||| ||| ||| ||| || || | || ||| || |||||||
Sbjct 464047 GAATTCCCTCCTTGTCCTGAATCTTTGTCTTAACGTTATCGATAGTGTCAGAGCTTTCAA 463988
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| | || || ||||| || || | || |||||||| ||||||||
Sbjct 463987 CTTCCAGGGTGATGGTTTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 463939
Score = 102 bits (112), Expect = 5e-17
Identities = 164/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 38082 CAATCATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTG 38141
||| ||| ||| || | | ||| | || | ||| || || |||||||||||| |||
Sbjct 464630 CAAGCATCACCCCCACGAAGACGGAGAACAAGATGGAGGGTAGACTCCTTTTGAATGTTG 464571
Query 38142 TAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGA 38201
||||||| ||| || | || || ||||| || || ||||| || || | || ||
Sbjct 464570 TAATCAGCCAAGGTTCGACCATCCTCCAATTGCTTCCCAGCAAAGATGAGCCTCTGCTGG 464511
Query 38202 TCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCA 38261
|| | ||||| || || |||||| ||| || ||||||||||| | ||||| |
Sbjct 464510 TCTGGGGGGATACCCTCCTTGTCCTGAATCTTAGTCTTCACATTCTCAATTGTATCAGAA 464451
Query 38262 CTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| ||||| || | || ||||| || || || | ||| ||||| || ||||||||
Sbjct 464450 GTCTCAACCTCGAGGGTGATAGTCTTCCCGGTGAGGGTCTTCACAAAGATCTGCAT 464395
Score = 84.2 bits (92), Expect = 1e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||| || |||||||| | |||||||| ||||| |||||| ||||| || || || |
Sbjct 463939 TACCTCCCCTCAAACGGAGGACCAAATGCAGAGTAGACTCCTTCTGAATGTTATAGTCTG 463880
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | || | || || | || || || ||||| || || | || || || | |
Sbjct 463879 CAAGAGTCCGGCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCCGGTG 463820
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| |||||||| ||| || || ||||||||||| | || || | |||| |
Sbjct 463819 GGATCCCTTCTTTATCCTGGATCTTCGTCTTCACATTCTCAATGGTGTCAGAAGTTTCGA 463760
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| || || || || || || || | ||| || || || ||||||||
Sbjct 463759 CTTCCAAGGTGATCGTCTTGCCTGTTAGGGTCTTGACAAAGATCTGCAT 463711
Score = 84.2 bits (92), Expect = 1e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| | || | ||||| || || || |||||||| || ||||||||||
Sbjct 464395 TACCACCTCTGAGGCGGAGGACCAAGTGCAGGGTTGATTCCTTTTGGATGTTGTAATCAG 464336
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|||| | | || || | || || || ||||| || | | || || || | |
Sbjct 464335 CCAAAGTCCTGCCATCCTCCAGCTGCTTCCCAGCAAAGATAATCCTCTGCTGGTCAGGTG 464276
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||| || || || ||| || ||||||||| | | |||||| |||||||
Sbjct 464275 GAATGCCCTCCTTATCTTGAATCTTCGTCTTCACATTGTCAATTGTATCTGAGCTTTCAA 464216
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||||| || || ||||| || || | || || ||||| ||||||||
Sbjct 464215 CTTCTAGGGTGATGGTTTTCCCAGTAAGAGTCTTAACGAAAATCTGCAT 464167
>seq210
Length=265509
Score = 96.9 bits (106), Expect = 2e-15
Identities = 79/95 (83%), Gaps = 6/95 (6%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||| |||||||||||||||||||||||| ||||| ||| | || | |||||||
Sbjct 137249 AAGCTCGTTCCCTTGGCTGTGGTTTCGCTGGATAG-AGACAAGGACAATGAGAATCTCGC 137191
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| |||||| |||||||||||||||||| ||
Sbjct 137190 TAATCCATTCATGTGCGTCACTAATTAGATGATGA 137156
>seq181
Length=290240
Score = 93.3 bits (102), Expect = 3e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||| ||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct 143163 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTTTCTT 143222
Query 20007 GGTAATATTTAGCCTT 20022
| | |||||||||||
Sbjct 143223 GCCAGTATTTAGCCTT 143238
Score = 87.8 bits (96), Expect = 1e-12
Identities = 68/81 (84%), Gaps = 5/81 (6%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||| |||||||||||| ||||||| |||| || ||||||||
Sbjct 154685 AAGCCCGTTCCCTTGGTTGTGGTTTCGCTGGATAGTATGCAGGGGCAATGGGAATCTCGT 154626
Query 25957 TAATCCTTTCATGCGCGTCAC 25977
|||||| ||||||||| ||||
Sbjct 154625 TAATCCATTCATGCGCATCAC 154605
>seq2
Length=1269521
Score = 93.3 bits (102), Expect = 3e-14
Identities = 75/88 (85%), Gaps = 2/88 (2%)
Strand=Plus/Minus
Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGGGTAATCTCGTTAATCCT 25963
|||| ||||||||||| |||||||||| |||||||| || ||| ||||||||||||||
Sbjct 1042789 GCCCATTCCCTTGGCTATGGTTTCGCTGGATAGTAGCCAGTGGG-AATCTCGTTAATCCA 1042731
Query 25964 TTCATGCGCGTCACTAATTAGATGACGA 25991
||||| | |||||| ||||||||| ||
Sbjct 1042730 TTCATACATGTCACT-ATTAGATGATGA 1042704
>seq355
Length=215899
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174
||||| ||| ||||| ||||| ||||| || | |||| || | || || || ||
Sbjct 205498 TGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAAAGTGCGCCCATCCTCCAACTGC 205439
Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234
|| || ||||| || | | || || || | || | ||||| |||||| || ||
Sbjct 205438 TTACCAGCAAAAATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTGTATCTTA 205379
Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294
||| ||||| | || ||||||| || ||||| || || || || ||||| || |||
Sbjct 205378 GTCTTGACATTATCGATAGTATCTGAGCTCTCAACCTCCAAGGTGATGGTTTTCCCAGTC 205319
Query 38295 AAGGTTTTCACGAATATCTGCAT 38317
|||||||| || ||||| |||||
Sbjct 205318 AAGGTTTTAACAAATATTTGCAT 205296
>seq140
Length=331402
Score = 86.0 bits (94), Expect = 4e-12
Identities = 67/79 (85%), Gaps = 1/79 (1%)
Strand=Plus/Plus
Query 19944 TTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 20003
|| |||||| || ||||| ||||||| ||||||||| || ||||||||||||||||||||
Sbjct 12072 TTACTCTCTTTTTAAAGTCCTTTTCATCTTTCCCTCGCG-TACTTGTTCGCTATCGGTCT 12130
Query 20004 CGCGGTAATATTTAGCCTT 20022
| || | |||| ||||||
Sbjct 12131 CTCGCCAGTATTCAGCCTT 12149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334901487871538
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |