Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq355 125 6e-24
seq51 120 3e-22
seq6 120 3e-22
seq338 118 9e-22
seq319 111 1e-19
seq2834 109 5e-19
seq843 105 6e-18
seq1427 102 7e-17
>seq355
Length=215899
Score = 125 bits (138), Expect = 6e-24
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||||||||| || || ||||| || ||| ||||||| | || || ||| ||
Sbjct 205295 AATGCAAATATTTGTTAAAACCTTGACTGGGAAAACCATCACCTTGGAGGTTGAGAGCTC 205354
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| |||||||| | ||| || || ||||| ||||| |||||||| |||||
Sbjct 205355 AGATACTATCGATAATGTCAAGACTAAGATACAGGACAAGGAAGGAATTCCACCAGACCA 205414
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | |||||||| || || || || || |||| |||||| ||| || |||||
Sbjct 205415 GCAGAGGTTGATTTTTGCTGGTAAGCAGTTGGAGGATGGGCGCACTTTGGCAGACTACAA 205474
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
||||| || |||||||| || ||
Sbjct 205475 CATTCAGAAGGAATCCACCCTTCA 205498
Score = 113 bits (124), Expect = 4e-20
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| | ||||| || | ||||| | ||||| ||| |||
Sbjct 204384 ATGCAGATTTTTGTTAAGACCCTCACCGGGAAGACTATCACCCTTGAAGTTGAGAGTTCT 204443
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|||||||| || |||| || |||||| ||| ||||| ||||| ||||| || ||
Sbjct 204444 GACACTATTGATAACGTCA---AAACAAAAATTCA-AGACAAGGAAGGTATTCCCCCAGA 204499
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||| ||| || | || |||||||| || || | ||||||| ||||| | | |||||
Sbjct 204500 CCAGCAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACCCTTGCTGATTA 204559
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||| || || || || || || || || | || || | |||||||| ||
Sbjct 204560 CAACATCCAGAAGGAGTCGACACTCCACCTTGTTCTCCGTCTAAGAGGTGG 204610
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||||||||| | || || || | ||||| | || || || |||
Sbjct 204612 ATGCAGATCTTTGTAAAGACCCTCACTGGGAAGACTATCACCCTTGAGGTTGAAAGCTCT 204671
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|||||||| || | || |||||| ||||| ||||| ||||| || |||||
Sbjct 204672 GACACTATTGATAATGTTAAAACCAAAATCCAAGACAAGGAAGGTATTCCCCCAGACCAG 204731
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || |||||||| ||||| | || |||| |||||| | | ||||||||
Sbjct 204732 CAGAGGTTGATCTTTGCCGGAAAACAGCTTGAGGATGGCCGCACTCTTGCTGATTACAAC 204791
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| || || || || || || || | || || | |||||||| ||
Sbjct 204792 ATCCAGAAGGAGTCAACCCTCCACCTGGTTCTCCGTCTAAGAGGTGG 204838
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| |||||| | ||||| ||| |||| || |||| || ||| | |
Sbjct 204156 ATGCAAATCTTTGTTAAGACTCTTACCGGAAAAACCATAACTCTCGAGGTTGAGAGTTTT 204215
Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| ||||| || || ||| | || | ||| || || || || ||||| || |||
Sbjct 204216 GACACCATCGA--CAATGTTAAGACGAAGATTCAA-GATAAGGAGGGAATTCCCCCAGAC 204272
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| ||||| | || ||||| || || || | || |||| | || | | || |||
Sbjct 204273 CAGCAGCGTCTGATCTTTGCTGGAAAGCAGCTGGAGGATGGCAGAACGCTCGCTGACTAC 204332
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||||| |||||||| || || || | || || | || ||||| ||
Sbjct 204333 AATATTCAGAAAGAATCGACCCTCCACCTTGTTCTCCGTCTTAGAGGGGG 204382
Score = 93.3 bits (102), Expect = 4e-14
Identities = 162/233 (70%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||||||||| || ||||||||||| || || | ||||| | || || ||| ||
Sbjct 205067 AATGCAAATATTCGTCAAGACTTTGACTGGGAAGACGATCACTTTGGAGGTCGAGAGTTC 205126
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| || || || || | ||||| | ||| || || || || ||||| || ||
Sbjct 205127 AGACACCATTGA--CAATGTCAAGGCAAAGATTCA-AGATAAGGAGGGCATTCCCCCAGA 205183
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|| || || | || ||||| || || || | || |||| | || | | || ||
Sbjct 205184 TCAGCAAAGGTTAATCTTTGCAGGGAAGCAGCTCGAGGATGGGAGGACCCTTGCTGACTA 205243
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|||||| ||||| || || || || || || ||||| | ||||||||||||
Sbjct 205244 CAATATCCAAAAGGAGTCTACACTTCACTTGGTGCTTCGTTTAAGAGGAGGAA 205296
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/232 (69%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| | ||||| || | ||||| | || || || ||
Sbjct 204840 ATGCAGATCTTTGTGAAGACCCTCACCGGGAAGACAATCACCCTTGAGGTTGAAAGCTCC 204899
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| || || || || || | |||| ||| || || ||||| ||||| ||||||
Sbjct 204900 GACACCATTGA--CAATGTCAAAACCAAAATTCAA-GATAAGGAAGGCATTCCCCCTGAC 204956
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||| | | || ||||| || || || | || |||| ||||| | | ||||||
Sbjct 204957 CAACAGAGACTGATCTTTGCTGGAAAGCAGCTTGAGGATGGGCGCACCCTTGCTGATTAC 205016
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
| ||||| || || || ||||| ||| | || || | ||||||| ||||
Sbjct 205017 ACCATTCAGAAGGAGTCAACGCTCCATCTTGTACTCCGTTTAAGAGGTGGAA 205068
>seq51
Length=574565
Score = 120 bits (132), Expect = 3e-22
Identities = 167/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||| | || || ||| ||||||| | ||||| || |||
Sbjct 463939 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAAACCATCACCCTGGAAGTTGAAAGCTCT 463998
Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||||||||| | || | ||| |||| | ||| ||||| || || |||||||| ||||
Sbjct 463999 GACACTATCGA-TAACGTTAAGACAAAGATTCA-GGACAAGGAGGGAATTCCACCAGACC 464056
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| || | || |||||||| || || || || |||| | || ||| |||||||
Sbjct 464057 AGCAGAGGCTGATCTTTGCCGGGAAGCAGTTGGATGATGGAAGGACATTGGCTGATTACA 464116
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||||| || ||||| || | || | ||||| || | || |||||
Sbjct 464117 ATATTCAGAAGGAATCTACTTTGCACCTGGTGCTTCGGTTGAGGGGAGG 464165
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || || |||| || || ||||||| |||| |||||| | |||
Sbjct 463483 ATGCAAATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGACTTCT 463542
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||||||| ||| | ||| | |||| ||| || || || || || ||||| |||||
Sbjct 463543 GACACTATTGAGAATGTCAAGACCAAAATTCA-GGATAAGGAGGGTATCCCACCGGACCA 463601
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | || || || || || || || || |||| | ||| | | || |||||
Sbjct 463602 GCAGAGGCTCATCTTCGCTGGTAAGCAGTTGGATGATGGCAGAACTCTAGCTGACTACAA 463661
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||| || ||||| || || ||||| ||
Sbjct 463662 CATCCAAAAGGAGTCCACTCTCCACTTAGTCCT 463694
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| | || || || | ||||| | ||||| || | |||
Sbjct 463711 ATGCAGATCTTTGTCAAGACCCTAACAGGCAAGACGATCACCTTGGAAGTCGAAACTTCT 463770
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || ||| ||||| || ||| || ||||||||||| ||||| |||||
Sbjct 463771 GACACCATTGAGAATGTGAAGACGAAGATCCAGGATAAAGAAGGGATCCCACCGGACCAG 463830
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || |||||||||| || || || | || |||| || ||| | | || || ||
Sbjct 463831 CAGAGGCTTATTTTTGCTGGGAAGCAGCTTGAGGATGGCCGGACTCTTGCAGACTATAAC 463890
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||| || || || || || ||||| || ||
Sbjct 463891 ATTCAGAAGGAGTCTACTCTGCATTTGGTCCT 463922
Score = 102 bits (112), Expect = 7e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||| | || || ||| ||||||| | ||||| || ||
Sbjct 464167 ATGCAGATTTTCGTTAAGACTCTTACTGGGAAAACCATCACCCTAGAAGTTGAAAGCTCA 464226
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || || || ||||| | || | ||| || || || || ||||||||||||||
Sbjct 464227 GATACAATTGACAATGTGAAGACGAAGATTCAA-GATAAGGAGGGCATTCCACCTGACCA 464285
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| ||||||| ||||| || || || | || |||| | ||| ||| ||||||||
Sbjct 464286 GCAGAGGATTATCTTTGCTGGGAAGCAGCTGGAGGATGGCAGGACTTTGGCTGATTACAA 464345
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| ||||| ||||| || || || || || || | || ||||| ||
Sbjct 464346 CATCCAAAAGGAATCAACCCTGCACTTGGTCCTCCGCCTCAGAGGTGG 464393
>seq6
Length=1196388
Score = 120 bits (132), Expect = 3e-22
Identities = 167/232 (72%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||| ||||||||||| || || ||||||| | || || ||| ||
Sbjct 29019 AATGCAAATTTTTGTTAAGACTTTGACAGGGAAGACCATCACTTTGGAGGTTGAGAGCTC 28960
Query 25058 TGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113
||||||||| || |||| |||| || | ||| ||||| ||||| ||||| || |
Sbjct 28959 TGACACTATTGATAATGTCA---AAGCCAAGATTCAG-GACAAGGAAGGCATTCCTCCGG 28904
Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173
|||| || || | || |||||||| || || | || |||| | || | | ||||
Sbjct 28903 ACCAGCAAAGGTTGATCTTTGCCGGGAAGCAGCTTGATGATGGGAGGACCCTTGCGGATT 28844
Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||||| ||||| || || || || || || ||||| | | ||||||||
Sbjct 28843 ACAATATCCAAAAGGAGTCTACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 28792
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||||||||| || || ||||||| | || || ||| ||
Sbjct 28562 ATGCAGATTTTTGTCAAGACTTTGACTGGGAAGACCATCACCCTGGAGGTTGAGAGCTCA 28503
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| ||| |||| |||| |||||| || || || |||||||| || |||||
Sbjct 28502 GATACTGTCGATAATGTGAAAACTAAAATCCAGGATAAGGAGGGGATTCCCCCGGACCAG 28443
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| | | || ||||| || || ||| | || |||| ||||| ||| || ||||||
Sbjct 28442 CAGAGACTAATCTTTGCAGGGAAGCAACTCGAGGATGGACGCACCTTGGCTGACTACAAT 28383
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
||||| ||||||||||| || ||
Sbjct 28382 ATTCAGAAAGAATCCACCCTCCA 28360
Score = 109 bits (120), Expect = 5e-19
Identities = 165/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||||||||| || || ||||||| | || || ||| ||
Sbjct 29474 ATGCAAATTTTTGTGAAGACTTTGACAGGGAAGACCATCACTTTGGAGGTTGAGAGCTCC 29415
Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||||||| || || || ||| | |||| ||| ||||| || || || || || ||
Sbjct 29414 GACACTATTGA--CAATGTTAAGACCAAAATTCAA-GACAAGGAGGGAATCCCCCCAGAT 29358
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| ||| || | || ||||| || || || | || |||| || ||| | | ||||||
Sbjct 29357 CAGCAGAGGTTGATCTTTGCTGGGAAGCAGCTCGAGGATGGGCGTACTCTTGCTGATTAC 29298
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||| || || ||||| || || ||| | ||||| | |||| |||||
Sbjct 29297 AATATCCAGAAGGAATCAACCCTCCATCTTGTGCTCCGATTAAGGGGAGG 29248
Score = 102 bits (112), Expect = 7e-17
Identities = 155/216 (72%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||||||||||||||| || ||| | || || | || || || ||
Sbjct 29931 AATGCAAATCTTTGTAAAGACTTTGACAGGAAAAACAATTACCTTGGAGGTTGAAAGCTC 29872
Query 25058 TGACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||||| |||| || || ||| | || | ||| ||||||||||| || || || ||
Sbjct 29871 TGACACTGTCGA--CAATGTTAAGACCAAGATTCAG-GACAAAGAAGGAATCCCCCCGGA 29815
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|| ||| || | || ||||| || || || | || |||| || ||| | | |||||
Sbjct 29814 TCAGCAGAGGTTGATCTTTGCTGGGAAGCAGCTCGAGGATGGACGTACTCTTGCTGATTA 29755
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||| || || || || || || || ||| | |||||
Sbjct 29754 CAACATCCAGAAGGAGTCAACCCTCCATCTTGTGCT 29719
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| ||||| || || ||||||| | || || ||| ||
Sbjct 28790 ATGCAGATTTTTGTTAAGACCTTGACAGGGAAGACCATCACTTTGGAGGTTGAGAGCTCA 28731
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|||||||| || | ||| || ||| ||||| || || ||||| ||||| ||
Sbjct 28730 GACACTATTGATAATGTAAAGACTAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCAG 28671
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | ||||| ||||| || || | || |||| | || | | |||||||||
Sbjct 28670 CAGAGGTTGATTTTCGCCGGGAAGCAGCTTGAGGATGGGAGGACCCTTGCAGATTACAAT 28611
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| ||||| || || || || || || ||||| | ||||||| ||
Sbjct 28610 ATCCAAAAGGAGTCTACCCTTCACTTGGTGCTCCGTTTAAGAGGTGG 28564
Score = 96.9 bits (106), Expect = 3e-15
Identities = 153/215 (71%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||||||||| || || ||||||| | || || ||| ||
Sbjct 29702 ATGCAAATTTTTGTGAAGACTTTGACAGGGAAGACCATCACTTTGGAGGTTGAGAGCTCA 29643
Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||||||| || || || ||| | || | ||| |||||||| || ||||| || ||
Sbjct 29642 GACACTATTGA--CAATGTTAAGACTAAGATTCA-GGACAAAGAGGGAATTCCCCCGGAT 29586
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| ||| || | || ||||| || || || | || |||| || ||| | | ||||||
Sbjct 29585 CAGCAGAGGTTGATCTTTGCTGGGAAGCAGCTCGAGGATGGACGTACTCTTGCTGATTAC 29526
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || || || || || ||| | || ||
Sbjct 29525 AACATCCAGAAGGAGTCAACCCTCCATCTTGTTCT 29491
Score = 86.0 bits (94), Expect = 5e-12
Identities = 161/232 (69%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || ||||| || || || | || || | || || ||| ||
Sbjct 29246 ATGCAAATTTTTGTGAAAACTTTAACAGGGAAGACTATTACTTTGGAGGTTGAGAGCTCC 29187
Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||||||| || || || ||| | |||| ||| ||||| || || || || || ||
Sbjct 29186 GACACTATTGA--CAATGTTAAGACCAAAATTCAA-GACAAGGAGGGAATCCCCCCAGAT 29130
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| ||| || | || ||||| || || || | || |||| || ||| | | ||||||
Sbjct 29129 CAGCAGAGGTTGATCTTTGCTGGGAAGCAGCTCGAGGATGGGCGTACTCTTGCTGATTAC 29070
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||||| || || || || || || ||| | || || | ||||||| ||||
Sbjct 29069 AATATCCAGAAGGAGTCAACCCTCCATCTTGTTCTCCGATTAAGAGGTGGAA 29018
>seq338
Length=211836
Score = 118 bits (130), Expect = 9e-22
Identities = 146/197 (74%), Gaps = 6/197 (3%)
Strand=Plus/Minus
Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054
|| ||||||||||||||| || ||| | || |||||| ||||||| | || || || ||
Sbjct 171492 AAAAATGCAAATATTTGTGAAAACTCTTACGGGTAAAACCATCACCCTTGAGGTTGAATC 171433
Query 25055 GTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111
|||||| ||| | || || | || |||| ||| |||||||||||| |||| |||
Sbjct 171432 TAGTGACACCATCAA--CAATGTCAAGGCTAAAATTCA-TGACAAAGAAGGCATTCAACC 171376
Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171
|| |||||||| | || || ||||| || ||| | ||||| | || ||| | | |||
Sbjct 171375 CGATCAACAGCGCCTCATCTTCGCCGGAAAGCAACTTGAAGACAACCGTACTCTAGCCGA 171316
Query 25172 TTACAATATTCAAAAAG 25188
|||||| || || ||||
Sbjct 171315 TTACAACATCCAGAAAG 171299
>seq319
Length=213347
Score = 111 bits (122), Expect = 1e-19
Identities = 166/233 (71%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || || || ||||| |||||||| || ||||||| |||| || ||| ||
Sbjct 180997 AATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCCTCGAGGTTGAGAGCTC 181056
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| || || || || | || || | ||| ||||| ||||| || || || ||
Sbjct 181057 GGACACCATTGA--CAATGTCAAGGCGAAGATTCAG-GACAAGGAAGGCATCCCCCCAGA 181113
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||| ||| || | ||||||||||| || || | ||||||| | ||| | | |||||
Sbjct 181114 CCAGCAGAGGTTGATTTTTGCCGGGAAGCAGCTGGAAGATGGAAGGACTCTTGCGGATTA 181173
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|||||| || || || || || || || || ||||| | | || |||||||
Sbjct 181174 CAATATCCAGAAGGAGTCAACCCTTCACTTGGTGCTCCGTTTGAGGGGAGGAA 181226
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/231 (70%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| | || || || ||||||| |||| || ||| ||
Sbjct 180086 ATGCAAATCTTCGTTAAGACCCTTACTGGAAAGACCATCACTCTCGAGGTCGAGAGTTCC 180145
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || || || ||| || ||| ||||| ||||||||||| || ||||
Sbjct 180146 GACACCATTGA--CAATGTCAAGACTAAGATCCAAGACAAGGAAGGGATTCCCCCAGACC 180203
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || || | || || ||||| ||||| |||| || | || || | | || ||||
Sbjct 180204 AGCAAAGGCTGATCTTCGCCGGAAAACAGCTAGAGGACGGCCGAACCCTAGCTGACTACA 180263
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
| |||||||| || || || || || | ||||| | || || |||||||
Sbjct 180264 ACATTCAAAAGGAGTCAACTCTTCACCTTGTGCTCCGTCTCAGGGGAGGAA 180314
>seq2834
Length=64598
Score = 109 bits (120), Expect = 5e-19
Identities = 152/210 (72%), Gaps = 6/210 (3%)
Strand=Plus/Plus
Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054
|| |||||| || || || || || | || |||||| |||| || | ||||| || ||
Sbjct 704 AAAAATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAAGTCGAATC 763
Query 25055 GTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111
|||||||| ||||| || || |||| || | || ||||||||||| || |||||
Sbjct 764 CTCTGACACAATCGA--CAATGTGAAAGCCAAGATCCAA-GACAAAGAAGGCATCCCACC 820
Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171
|||||||| || | || || ||||| ||||| | ||||||| |||||| | | |||
Sbjct 821 CGACCAACAACGCCTCATCTTCGCCGGAAAACAGCTCGAAGATGGCCGCACTTTAGCCGA 880
Query 25172 TTACAATATTCAAAAAGAATCCACGCTACA 25201
||||| || || || || || || || ||
Sbjct 881 CTACAACATCCAGAAGGAGTCAACCCTTCA 910
>seq843
Length=130910
Score = 105 bits (116), Expect = 6e-18
Identities = 153/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || || | || || ||| |||| || | ||||| || || ||
Sbjct 120130 ATGCAGATTTTCGTGAAAACCCTAACTGGGAAAACCATAACCCTAGAAGTCGAATCATCG 120189
Query 25059 GACACTATCGAGTCACTGAAGCAA--AAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| ||||| || || || || ||| ||||||||||| || ||||| || |
Sbjct 120190 GACACAATCGA--CAATGTCAAAACCAAGATCCAAGACAAAGAAGGCATCCCACCAGATC 120247
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| || | || ||||| || |||||||| ||||||| | || | | |||||||
Sbjct 120248 AACAACGCTTAATCTTTGCTGGGAAACAATTGGAAGATGGAAGAACACTTGCAGATTACA 120307
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| ||||| || ||||| ||||| ||| | |||||
Sbjct 120308 ACATTCAGAAGGAATCGACGCTTCATCTGGTGCT 120341
>seq1427
Length=108667
Score = 102 bits (112), Expect = 7e-17
Identities = 151/211 (72%), Gaps = 6/211 (3%)
Strand=Plus/Plus
Query 24994 GAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGT 25053
||| |||||| || || || || || | || |||||| |||| || | || || || |
Sbjct 17596 GAAAAATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTCGAAT 17655
Query 25054 CGTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCAC 25110
| || || || ||||| || || |||| || | || ||||||||||| || ||||
Sbjct 17656 CCTCCGATACCATCGA--CAATGTCAAAGCCAAGATCCAG-GACAAAGAAGGCATCCCAC 17712
Query 25111 CTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCG 25170
| |||||||| || | || || ||||| ||||| | ||||||| |||||| | | ||
Sbjct 17713 CAGACCAACAACGTCTCATCTTCGCCGGAAAACAGCTCGAAGATGGCCGCACTTTAGCCG 17772
Query 25171 ATTACAATATTCAAAAAGAATCCACGCTACA 25201
| ||||| || || || || ||||| || ||
Sbjct 17773 ACTACAACATCCAGAAGGAGTCCACCCTTCA 17803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433268861290370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |