Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1427 134 1e-26
seq319 131 1e-25
seq338 125 6e-24
seq355 122 7e-23
seq51 120 3e-22
seq843 116 3e-21
seq6 114 1e-20
seq1360 111 1e-19
seq63 84.2 2e-11
seq28 84.2 2e-11
>seq1427
Length=108667
Score = 134 bits (148), Expect = 1e-26
Identities = 151/202 (75%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| ||||| || || || ||||| |||| |||||||| | || || || || ||| |
Sbjct 17597 AAAAATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTCGAATC 17656
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| |||||||| | ||| || ||||| || || || ||||| || || || ||||| ||
Sbjct 17657 CTCCGATACCATCGACAATGTCAAAGCCAAGATCCAGGACAAAGAAGGCATCCCACCAGA 17716
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
||||||||||| || || ||||| |||||| | || ||| |||||| | |||| ||
Sbjct 17717 CCAACAACGTCTCATCTTCGCCGGAAAACAGCTCGAAGATGGCCGCACTTTAGCCGACTA 17776
Query 22395 CAACATTCAAAAAGAATCCACC 22416
|||||| || || || ||||||
Sbjct 17777 CAACATCCAGAAGGAGTCCACC 17798
>seq319
Length=213347
Score = 131 bits (144), Expect = 1e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| ||||| |||| || || || |||| || ||||| |||| | ||
Sbjct 180314 ATGCAGATCTTTGTCAAAACCCTAACAGGAAAGACAATCACCCTCGAAGTCGAAAGCTCC 180373
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| ||||||||||||||||| || || || || || ||
Sbjct 180374 GACACCATTGACAACGTCAAGGCCAAAATTCAAGACAAGGAAGGAATCCCCCCAGACCAG 180433
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | || || |||||||| || ||| | |||||| ||| ||| || |||| ||||||
Sbjct 180434 CAAAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGAACCCTCGCCGACTACAAC 180493
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || |||||
Sbjct 180494 ATCCAGAAGGAGTCCAC 180510
Score = 125 bits (138), Expect = 6e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || ||| | || || || || | || |||||||| || | | ||
Sbjct 180542 ATGCAAATCTTTGTGAAGACTCTCACAGGGAAGACCATTACCCTTGAAGTCGAGAGCTCC 180601
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| || |||| || ||||||||||||||||||||||| || || ||
Sbjct 180602 GATACCATTGACAATGTCAAGGCTAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAG 180661
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || || ||||| || ||| | |||||| |||||| | |||| ||||||
Sbjct 180662 CAGAGGTTGATCTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACTCTTGCCGACTACAAC 180721
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| || || || || ||| | || || ||
Sbjct 180722 ATCCAGAAGGAGTCTACCCTTCACTTGGT 180750
Score = 118 bits (130), Expect = 9e-22
Identities = 149/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 22211 TTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGG 22270
|| || |||||||||| || ||||| || | || || || || ||||||| || || |
Sbjct 180078 TTATATAGATGCAAATCTTCGTTAAGACCCTTACTGGAAAGACCATCACTCTCGAGGTCG 180137
Query 22271 AAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCAC 22330
| | |||| ||| | ||| || |||| || || ||||||||||| || ||||| |
Sbjct 180138 AGAGTTCCGACACCATTGACAATGTCAAGACTAAGATCCAAGACAAGGAAGGGATTCCCC 180197
Query 22331 CCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCG 22390
| || || ||| | || || || ||||| |||||| ||||||| ||| ||| | | |
Sbjct 180198 CAGACCAGCAAAGGCTGATCTTCGCCGGAAAACAGCTAGAGGACGGCCGAACCCTAGCTG 180257
Query 22391 ATTACAACATTCAAAAAGAATCCAC 22415
| |||||||||||||| || || ||
Sbjct 180258 ACTACAACATTCAAAAGGAGTCAAC 180282
>seq338
Length=211836
Score = 125 bits (138), Expect = 6e-24
Identities = 144/194 (74%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| |||||||| ||||| |||||| | || |||||||| |||| ||||| || ||| |
Sbjct 171492 AAAAATGCAAATATTTGTGAAAACTCTTACGGGTAAAACCATCACCCTTGAGGTTGAATC 171433
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| || ||| | || || |||| |||||||| ||||| || || |||| ||||||
Sbjct 171432 TAGTGACACCATCAACAATGTCAAGGCTAAAATTCATGACAAAGAAGGCATTCAACCCGA 171373
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
|||||| || || || || ||||| || || | || || |||| || | |||||||
Sbjct 171372 TCAACAGCGCCTCATCTTCGCCGGAAAGCAACTTGAAGACAACCGTACTCTAGCCGATTA 171313
Query 22395 CAACATTCAAAAAG 22408
|||||| || ||||
Sbjct 171312 CAACATCCAGAAAG 171299
>seq355
Length=215899
Score = 122 bits (134), Expect = 7e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | ||||| || || |||| ||||| || |||| | ||
Sbjct 204840 ATGCAGATCTTTGTGAAGACCCTCACCGGGAAGACAATCACCCTTGAGGTTGAAAGCTCC 204899
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || ||||| ||||||||||| ||||| || ||||| || || |||
Sbjct 204900 GACACCATTGACAATGTCAAAACCAAAATTCAAGATAAGGAAGGCATTCCCCCTGACCAA 204959
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || || ||| | |||||| |||||| | | ||||||| |
Sbjct 204960 CAGAGACTGATCTTTGCTGGAAAGCAGCTTGAGGATGGGCGCACCCTTGCTGATTACACC 205019
Query 22399 ATTCAAAAAGAATCCAC 22415
||||| || || || ||
Sbjct 205020 ATTCAGAAGGAGTCAAC 205036
Score = 118 bits (130), Expect = 9e-22
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| ||||||||||| || | ||||| || || |||| |||||||| || | |
Sbjct 204383 GATGCAGATTTTTGTTAAGACCCTCACCGGGAAGACTATCACCCTTGAAGTTGAGAGTTC 204442
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| || | || | ||||| |||||||||||||||||| |||||||| || || ||
Sbjct 204443 TGACACTATTGATAACGTCAAAACAAAAATTCAAGACAAGGAAGGTATTCCCCCAGACCA 204502
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || |||||||| || ||| | || ||| ||||||| | | ||||||||
Sbjct 204503 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACCCTTGCTGATTACAA 204562
Query 22398 CATTCAAAAAGAATCCAC 22415
||| || || || || ||
Sbjct 204563 CATCCAGAAGGAGTCGAC 204580
Score = 109 bits (120), Expect = 5e-19
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||||||||| || || || ||||| |||| | || || || | | |
Sbjct 205296 ATGCAAATATTTGTTAAAACCTTGACTGGGAAAACCATCACCTTGGAGGTTGAGAGCTCA 205355
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || |||| || || || |||||||| || |||||||| || ||
Sbjct 205356 GATACTATCGATAATGTCAAGACTAAGATACAGGACAAGGAAGGAATTCCACCAGACCAG 205415
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| || || ||||| |||||| ||||| | | || ||||||
Sbjct 205416 CAGAGGTTGATTTTTGCTGGTAAGCAGTTGGAGGATGGGCGCACTTTGGCAGACTACAAC 205475
Query 22399 ATTCAAAAAGAATCCACC 22416
||||| || |||||||||
Sbjct 205476 ATTCAGAAGGAATCCACC 205493
Score = 105 bits (116), Expect = 6e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | || || || || |||| ||||| || |||| | |
Sbjct 204612 ATGCAGATCTTTGTAAAGACCCTCACTGGGAAGACTATCACCCTTGAGGTTGAAAGCTCT 204671
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | ||| ||||| ||||||||||| |||||||| || || ||
Sbjct 204672 GACACTATTGATAATGTTAAAACCAAAATCCAAGACAAGGAAGGTATTCCCCCAGACCAG 204731
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || |||||||| |||||| | |||||| |||||| | | |||||||||
Sbjct 204732 CAGAGGTTGATCTTTGCCGGAAAACAGCTTGAGGATGGCCGCACTCTTGCTGATTACAAC 204791
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || || || || |||
Sbjct 204792 ATCCAGAAGGAGTCAACC 204809
>seq51
Length=574565
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| ||||| ||| | || || ||||| |||| || ||||| |||| | |
Sbjct 464167 ATGCAGATTTTCGTTAAGACTCTTACTGGGAAAACCATCACCCTAGAAGTTGAAAGCTCA 464226
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| || | || || |||||||| |||||||| |||||||| || ||
Sbjct 464227 GATACAATTGACAATGTGAAGACGAAGATTCAAGATAAGGAGGGCATTCCACCTGACCAG 464286
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | |||| ||||| || || ||| | |||||| | | || | | |||||||||
Sbjct 464287 CAGAGGATTATCTTTGCTGGGAAGCAGCTGGAGGATGGCAGGACTTTGGCTGATTACAAC 464346
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| ||||| ||||| ||| | || || ||
Sbjct 464347 ATCCAAAAGGAATCAACCCTGCACTTGGT 464375
Score = 102 bits (112), Expect = 7e-17
Identities = 149/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
|||||||||| ||||| ||||| | || || || || |||| || || ||||| ||
Sbjct 463481 AGATGCAAATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGACTT 463540
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || || | || || |||| |||||||| || ||||||||||| ||||| || |
Sbjct 463541 CTGACACTATTGAGAATGTCAAGACCAAAATTCAGGATAAGGAGGGTATCCCACCGGACC 463600
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || | || || || || || || ||||| || ||| | | || | | || ||||
Sbjct 463601 AGCAGAGGCTCATCTTCGCTGGTAAGCAGTTGGATGATGGCAGAACTCTAGCTGACTACA 463660
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGT 22427
|||| ||||| || ||||| | || |||||
Sbjct 463661 ACATCCAAAAGGAGTCCACTCTCCACTTAGT 463691
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || ||| | || || ||||| |||| || ||||| |||| | |
Sbjct 463939 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAAACCATCACCCTGGAAGTTGAAAGCTCT 463998
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | | || ||| ||||| ||||||||||| |||||||| || ||
Sbjct 463999 GACACTATCGATAACGTTAAGACAAAGATTCAGGACAAGGAGGGAATTCCACCAGACCAG 464058
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || |||||||| || ||||| || ||| | || | | ||||||||
Sbjct 464059 CAGAGGCTGATCTTTGCCGGGAAGCAGTTGGATGATGGAAGGACATTGGCTGATTACAAT 464118
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || ||||| || | || | || | || ||| | ||||||
Sbjct 464119 ATTCAGAAGGAATCTACTTTGCACCTGGTGCTTCGGTTGAGGGGAGGT 464166
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | ||||| || || |||| || || || || || |
Sbjct 464395 ATGCAGATCTTTGTGAAGACCCTCACCGGGAAGACTATCACCCTCGAGGTTGAGACTTCT 464454
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | || || ||||| |||||||||||||| || || || ||
Sbjct 464455 GATACAATTGAGAATGTGAAGACTAAGATTCAGGACAAGGAGGGTATCCCCCCAGACCAG 464514
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || || || || |||||| || ||| | | |||||||||
Sbjct 464515 CAGAGGCTCATCTTTGCTGGGAAGCAATTGGAGGATGGTCGAACCTTGGCTGATTACAAC 464574
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| || || ||| | ||| | ||| | || | || || |||
Sbjct 464575 ATTCAAAAGGAGTCTACCCTCCATCTTGTTCTCCGTCTTCGTGGGGGT 464622
>seq843
Length=130910
Score = 116 bits (128), Expect = 3e-21
Identities = 165/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||||||||| ||||| || ||||| |||| || ||||| | || || ||||| ||| |
Sbjct 120126 AAAGATGCAGATTTTCGTGAAAACCCTAACTGGGAAAACCATAACCCTAGAAGTCGAATC 120185
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| || || | ||| || ||||| || || |||||||| || || || ||||| ||
Sbjct 120186 ATCGGACACAATCGACAATGTCAAAACCAAGATCCAAGACAAAGAAGGCATCCCACCAGA 120245
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
||||||||| | || ||||| || ||||| || || ||| | || | | |||||
Sbjct 120246 TCAACAACGCTTAATCTTTGCTGGGAAACAATTGGAAGATGGAAGAACACTTGCAGATTA 120305
Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||| || ||||| || | ||| | || | ||| | || || |||
Sbjct 120306 CAACATTCAGAAGGAATCGACGCTTCATCTGGTGCTTCGACTTCGTGGGGGT 120357
>seq6
Length=1196388
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| ||||||||||| || || || | ||| | || || || | | ||
Sbjct 29246 ATGCAAATTTTTGTGAAAACTTTAACAGGGAAGACTATTACTTTGGAGGTTGAGAGCTCC 29187
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || |||||||||||||||||||| || || || |||||
Sbjct 29186 GACACTATTGACAATGTTAAGACCAAAATTCAAGACAAGGAGGGAATCCCCCCAGATCAG 29127
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| || || ||| | |||||| || || | | ||||||||
Sbjct 29126 CAGAGGTTGATCTTTGCTGGGAAGCAGCTCGAGGATGGGCGTACTCTTGCTGATTACAAT 29067
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
|| || || || || ||| | ||| | ||| | |||||
Sbjct 29066 ATCCAGAAGGAGTCAACCCTCCATCTTGTTCTCCGATT 29029
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| || ||||| || || || || ||||| | || || || | | ||
Sbjct 29474 ATGCAAATTTTTGTGAAGACTTTGACAGGGAAGACCATCACTTTGGAGGTTGAGAGCTCC 29415
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || |||||||||||||||||||| || || || |||||
Sbjct 29414 GACACTATTGACAATGTTAAGACCAAAATTCAAGACAAGGAGGGAATCCCCCCAGATCAG 29355
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| || || ||| | |||||| || || | | ||||||||
Sbjct 29354 CAGAGGTTGATCTTTGCTGGGAAGCAGCTCGAGGATGGGCGTACTCTTGCTGATTACAAT 29295
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || ||||| ||| | ||| | || | ||||| | ||||||
Sbjct 29294 ATCCAGAAGGAATCAACCCTCCATCTTGTGCTCCGATTAAGGGGAGGT 29247
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||||||||| ||||| || || || || ||||| | || || || | | |
Sbjct 29018 ATGCAAATTTTTGTTAAGACTTTGACAGGGAAGACCATCACTTTGGAGGTTGAGAGCTCT 28959
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || ||||| || ||||| |||||||| || ||||| || || ||
Sbjct 28958 GACACTATTGATAATGTCAAAGCCAAGATTCAGGACAAGGAAGGCATTCCTCCGGACCAG 28899
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || |||||||| || ||| | || ||| | ||| | | ||||||||
Sbjct 28898 CAAAGGTTGATCTTTGCCGGGAAGCAGCTTGATGATGGGAGGACCCTTGCGGATTACAAT 28839
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| ||||| || || ||| | || || || |||| ||| | |||||
Sbjct 28838 ATCCAAAAGGAGTCTACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 28792
Score = 111 bits (122), Expect = 1e-19
Identities = 144/199 (72%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| |||||||| || ||||| || || || || |||| || || || || | | |
Sbjct 28563 GATGCAGATTTTTGTCAAGACTTTGACTGGGAAGACCATCACCCTGGAGGTTGAGAGCTC 28504
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||||| || || || | ||| ||||| || || |||||||| ||||| || || ||
Sbjct 28503 AGATACTGTCGATAATGTGAAAACTAAAATCCAGGATAAGGAGGGGATTCCCCCGGACCA 28444
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | || || ||||| || || || | |||||| |||||| | | || |||||
Sbjct 28443 GCAGAGACTAATCTTTGCAGGGAAGCAACTCGAGGATGGACGCACCTTGGCTGACTACAA 28384
Query 22398 CATTCAAAAAGAATCCACC 22416
||||| ||||||||||||
Sbjct 28383 TATTCAGAAAGAATCCACC 28365
Score = 107 bits (118), Expect = 2e-18
Identities = 143/199 (72%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
|||||||||||||||| ||||| |||| || || | | |||||||| || || |
Sbjct 30160 AGATGCAAATTTTTGTCAAAACCCTAACTGGCAAGTCCATAACTCTTGAGGTCGAGAGTT 30101
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| ||||| | || || | || ||||||||||| || || || ||||| || ||||
Sbjct 30100 CTGATACGATTGATAATGTGAAGACCAAAATTCAAGATAAAGAAGGAATTCCCCCAGATC 30041
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || ||||| || ||||| || |||||| | |||||| ||| ||| | | || || |
Sbjct 30040 AGCAGCGTCTGATCTTTGCTGGTAAACAGCTCGAGGATGGCCGAACCCTTGCAGACTATA 29981
Query 22397 ACATTCAAAAAGAATCCAC 22415
|||| || || || || ||
Sbjct 29980 ACATCCAGAAGGAGTCTAC 29962
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| || ||||| || || || || ||||| | || || || | | |
Sbjct 29702 ATGCAAATTTTTGTGAAGACTTTGACAGGGAAGACCATCACTTTGGAGGTTGAGAGCTCA 29643
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || || ||||| ||||| ||||| ||||| || |||||
Sbjct 29642 GACACTATTGACAATGTTAAGACTAAGATTCAGGACAAAGAGGGAATTCCCCCGGATCAG 29583
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| || || ||| | |||||| || || | | |||||||||
Sbjct 29582 CAGAGGTTGATCTTTGCTGGGAAGCAGCTCGAGGATGGACGTACTCTTGCTGATTACAAC 29523
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
|| || || || || ||| | ||| | ||| | |||||
Sbjct 29522 ATCCAGAAGGAGTCAACCCTCCATCTTGTTCTCCGATT 29485
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || ||||| || || ||||| | || | || || |||| | |
Sbjct 29930 ATGCAAATCTTTGTAAAGACTTTGACAGGAAAAACAATTACCTTGGAGGTTGAAAGCTCT 29871
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || || ||| || | || || ||||| ||||| || || || || || |||||
Sbjct 29870 GACACTGTCGACAATGTTAAGACCAAGATTCAGGACAAAGAAGGAATCCCCCCGGATCAG 29811
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| || || ||| | |||||| || || | | |||||||||
Sbjct 29810 CAGAGGTTGATCTTTGCTGGGAAGCAGCTCGAGGATGGACGTACTCTTGCTGATTACAAC 29751
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
|| || || || || ||| | ||| | || | |||||
Sbjct 29750 ATCCAGAAGGAGTCAACCCTCCATCTTGTGCTCCGATT 29713
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| ||||||||||| || || || || || || ||||| | || || || | | |
Sbjct 28791 GATGCAGATTTTTGTTAAGACCTTGACAGGGAAGACCATCACTTTGGAGGTTGAGAGCTC 28732
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| || | || || | || || || || ||||||||||| ||||| || |||||
Sbjct 28731 AGACACTATTGATAATGTAAAGACTAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCA 28672
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || || ||||| || ||| | |||||| | ||| | | ||||||||
Sbjct 28671 GCAGAGGTTGATTTTCGCCGGGAAGCAGCTTGAGGATGGGAGGACCCTTGCAGATTACAA 28612
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGT 22427
|| ||||| || || ||| | || || ||
Sbjct 28611 TATCCAAAAGGAGTCTACCCTTCACTTGGT 28582
>seq1360
Length=99280
Score = 111 bits (122), Expect = 1e-19
Identities = 145/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| || || || ||||| ||||||| ||||| | || || || || ||| ||
Sbjct 35319 AAGATGCAGATATTCGTGAAAACCCTAACCGGGAAAACCATAACCCTAGAGGTTGAATCC 35260
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || || | ||| || | || || || ||||||||||| || ||||| || ||
Sbjct 35259 TCAGACACGATCGACAATGTGAAGACTAAGATCCAAGACAAGGAAGGCATTCCCCCAGAC 35200
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || ||||| ||||| ||||| |||||| | || || ||| || || |||| |||
Sbjct 35199 CAGCAGCGTCTGATATTCGCCGGAAAACAGCTCGAAGACGGCCGGACACTCGCCGACTAC 35140
Query 22396 AACATTCAAAAAGAATCCACC 22416
||||| || || || || |||
Sbjct 35139 AACATCCAGAAGGAGTCGACC 35119
>seq63
Length=488123
Score = 84.2 bits (92), Expect = 2e-11
Identities = 153/224 (68%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 128782 TCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCTGTT 128841
||||| || || || ||||| || || || | | || | |||||||||||||||||
Sbjct 274396 TCCACAGTGAACTTGATAGCATCAGCAGCTGCTCTTGTCCTTAAATAGTACATGCCTGTC 274455
Query 128842 TTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGGTTGA 128901
|||||||| | ||| | || | ||| | | ||| ||| | || | |||||||
Sbjct 274456 TTCAAACCCTTAGACCATGCATGGAAGTGCAGAGAGGTTAACTTTCCGAAATTGGGTTGT 274515
Query 128902 CTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGCCATA 128961
||| |||||| | ||||||||||||||| || || ||||| ||||||||
Sbjct 274516 GTCATGTGAATATTTAGGCTTTGACTTTGATCAATGAAACATCCTCGATCAACAGCCATA 274575
Query 128962 CCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAG 129005
||| || || | ||| |||||||| || || || ||||
Sbjct 274576 TCAACCAGTGTTCTTTGTTTAATTTCCCAGACAGTCCTGAAAAG 274619
>seq28
Length=745672
Score = 84.2 bits (92), Expect = 2e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| || ||||| |||||| | || || || || |||| |||||||| ||| |
Sbjct 697841 AAGATGCAGATCTTTGTGAAAACTCTTACTGGGAAGACCATCACCCTTGAAGTTGAATCA 697782
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATT 22326
| ||| || | ||| || ||||| || |||||||||||||| ||||||
Sbjct 697781 AGCGACACTATTGACAATGTCAAAACTAAGATTCAAGACAAGGAAGGTATT 697731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419670717358870
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |