Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1360 120 3e-22
seq355 120 3e-22
seq6 118 1e-21
seq843 111 2e-19
seq319 105 7e-18
seq338 100 3e-16
seq51 98.7 1e-15
seq28 86.0 6e-12
>seq1360
Length=99280
Score = 120 bits (132), Expect = 3e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
|||||| || |||| ||||| || || || |||||||| || |||| || || ||||
Sbjct 35104 AAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGTGTCCGGCCGTC 35163
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||| ||||| || ||||| | || || ||||||||||| || ||||| ||||| || ||
Sbjct 35164 TTCGAGCTGTTTTCCGGCGAATATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 35223
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| || || ||| ||| || | || || || || || |||| |||| |||
Sbjct 35224 TTGGATCTTAGTCTTCACATTGTCGATCGTGTCTGAGGATTCAACCTCTAGGGTTATGGT 35283
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| ||||| | ||||| ||||| || ||||| ||
Sbjct 35284 TTTCCCGGTTAGGGTTTTCACGAATATCTGCATCTT 35319
>seq355
Length=215899
Score = 120 bits (132), Expect = 3e-22
Identities = 155/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || |||| || ||||| || ||||||||||| ||||| | |||||| | ||
Sbjct 205508 AAGGACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAAAGTGCGCCCATC 205449
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|| | |||||| || ||| |||| | || ||||||||| || ||||||||||| || ||
Sbjct 205448 CTCCAACTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTGTC 205389
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||||| || ||| ||| || | ||||| | || || || | || | |||
Sbjct 205388 CTGTATCTTAGTCTTGACATTATCGATAGTATCTGAGCTCTCAACCTCCAAGGTGATGGT 205329
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| || ||||| ||||| || || |||||||||
Sbjct 205328 TTTCCCAGTCAAGGTTTTAACAAATATTTGCATT 205295
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || || || ||||||||||| || | |||||| | |||||||||||||| |||
Sbjct 204580 GTCGACTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGGCCATCTTCAAGCTGCTTTCCG 204521
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || | || ||||||||| || ||||| ||||| || ||||| |||||| ||
Sbjct 204520 GCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGAATTTTTGTTTTG 204461
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | || ||| || ||||| | || | ||||| ||||| | ||
Sbjct 204460 ACGTTATCAATAGTGTCAGAACTCTCAACTTCAAGGGTGATAGTCTTCCCGGTGAGGGTC 204401
Query 64427 TTTACGAAAATTTGCAT 64443
|| || ||||| |||||
Sbjct 204400 TTAACAAAAATCTGCAT 204384
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||||||||| ||||| ||||| || |||| || | | || || |||||||| ||
Sbjct 204352 GTCGATTCTTTCTGAATATTGTAGTCAGCGAGCGTTCTGCCATCCTCCAGCTGCTTTCCA 204293
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || || ||||||||||| || |||||||| || || ||||| || || |||
Sbjct 204292 GCAAAGATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTATCTTGAATCTTCGTCTTA 204233
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | || ||| || || || | ||||| ||| || ||||| | |||
Sbjct 204232 ACATTGTCGATGGTGTCAAAACTCTCAACCTCGAGAGTTATGGTTTTTCCGGTAAGAGTC 204173
Query 64427 TTTACGAAAATTTGCAT 64443
|| || || ||||||||
Sbjct 204172 TTAACAAAGATTTGCAT 204156
Score = 100 bits (110), Expect = 3e-16
Identities = 99/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | ||| || || || |||||| ||||||| || | ||||||| | ||
Sbjct 205051 AGTACAAGATGGAGCGTTGACTCCTTCTGAATGGTGTAATCAGCAAGGGTGCGCCCATCC 204992
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| || ||| | || || | ||| ||||| || ||||| ||||| || |||
Sbjct 204991 TCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTGGTCAGGGGGAATGCCTTCCTTATCT 204932
Query 64352 TGTATTTT 64359
|| |||||
Sbjct 204931 TGAATTTT 204924
Score = 87.8 bits (96), Expect = 2e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || ||||||||||| || | ||||| | || |||||||| || |||
Sbjct 204808 GTTGACTCCTTCTGGATGTTGTAATCAGCAAGAGTGCGGCCATCCTCAAGCTGTTTTCCG 204749
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359
||| | || | || ||||||||| || ||||| ||||| || ||||| |||||
Sbjct 204748 GCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGGATTTT 204696
>seq6
Length=1196388
Score = 118 bits (130), Expect = 1e-21
Identities = 156/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | |||| || || || ||||| || |||||||| || | ||| | | | ||
Sbjct 28807 AGCACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAATCCGCAAGGGTCCTCCCATCA 28866
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| |||||| | || | || |||||||| |||||||| ||||| || ||
Sbjct 28867 TCAAGCTGCTTCCCGGCAAAGATCAACCTTTGCTGGTCCGGAGGAATGCCTTCCTTGTCC 28926
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | | || ||||| ||| || | || ||| | || || || | ||| | |||
Sbjct 28927 TG-AATCTTGGCTTTGACATTATCAATAGTGTCAGAGCTCTCAACCTCCAAAGTGATGGT 28985
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
||| || |||||||| || || ||||||||||||
Sbjct 28986 CTTCCCTGTCAAAGTCTTAACAAAAATTTGCATT 29019
Score = 109 bits (120), Expect = 5e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285
|||| ||||| ||||| | || ||||| || || || |||||||| || | || |||
Sbjct 29257 AATCGGAGCACAAGATGGAGGGTTGATTCCTTCTGGATATTGTAATCAGCAAGAGTACGC 29316
Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
| || || |||||||| || ||| | || | || |||||| || || || ||||| ||
Sbjct 29317 CCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGGGGGATTCCCTCC 29376
Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405
|| ||||| ||||| ||| ||| || | || || | || || || | |||
Sbjct 29377 TTGTCTTGAATTTTGGTCTTAACATTGTCAATAGTGTCGGAGCTCTCAACCTCCAAAGTG 29436
Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| |||||| || |||||||| || || |||||||||||
Sbjct 29437 ATGGTCTTCCCTGTCAAAGTCTTCACAAAAATTTGCAT 29474
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
|||||| | || | || || || || || ||||| || ||||| | ||| || | ||
Sbjct 29946 AAGCACCAAGTGGAGAGTAGACTCCTTCTGGATGTTATAGTCTGCAAGGGTTCGGCCATC 30005
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|| ||||| || || ||| | || || |||||||| || || |||||||||||||| ||
Sbjct 30006 CTCGAGCTGTTTACCAGCAAAGATCAGACGCTGCTGATCTGGGGGAATTCCTTCTTTATC 30065
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| ||||| ||| ||| || | |||||| || || || | ||||| ||
Sbjct 30066 TTGAATTTTGGTCTTCACATTATCAATCGTATCAGAACTCTCGACCTCAAGAGTTATGGA 30125
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||| || | ||||| || |||||||||||
Sbjct 30126 CTTGCCAGTTAGGGTTTTGACAAAAATTTGCAT 30158
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | |||| || || || ||||| || ||||||||||| | ||| | | | ||
Sbjct 28579 AGCACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAATCTGCAAGGGTCCTCCCATCC 28638
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| ||||| |||| | || |||||| || || ||||| || || || ||
Sbjct 28639 TCAAGCTGCTTCCCGGCGAAAATCAACCTCTGCTGATCAGGGGGAATGCCCTCCTTGTCC 28698
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||||||| || | || || | || || || | ||| | ||||
Sbjct 28699 TGGATCTTAGTCTTTACATTATCAATAGTGTCTGAGCTCTCAACCTCCAAAGTGATGGTC 28758
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || ||||| || || || ||||| |||||
Sbjct 28759 TTCCCTGTCAAGGTCTTAACAAAAATCTGCAT 28790
Score = 102 bits (112), Expect = 8e-17
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285
|||| ||||| ||||| | || || || || || ||||||||||| || | || ||
Sbjct 29713 AATCGGAGCACAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGAGTACGT 29772
Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
| || || |||||||| || ||| | || | || |||||| || || || |||||||||
Sbjct 29773 CCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGGGGGATTCCTTCT 29832
Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405
|| || || || || ||| ||| || || || ||| | || || || | ||
Sbjct 29833 TTGTCCTGAATCTTGGTCTTAACATTGTCGACAGTGTCAGAGCTTTCAACCTCCAAGGTA 29892
Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
| || || || |||||||| ||||| || |||||||||
Sbjct 29893 ATTGTTTTTCCTGTCAAAGTCTTTACAAAGATTTGCATT 29931
Score = 100 bits (110), Expect = 3e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285
|||| || || ||||| | || || || || || ||||||||||| || | || ||
Sbjct 29485 AATCGGAGAACAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGAGTACGT 29544
Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
| || || |||||||| || ||| | || | || |||||| || || |||||||| |||
Sbjct 29545 CCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGGGGAATTCCCTCT 29604
Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405
|| || || || || ||| ||| || | || || | || || || | |||
Sbjct 29605 TTGTCCTGAATCTTAGTCTTAACATTGTCAATAGTGTCTGAGCTCTCAACCTCCAAAGTG 29664
Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| |||||| || |||||||| || || |||||||||||
Sbjct 29665 ATGGTCTTCCCTGTCAAAGTCTTCACAAAAATTTGCAT 29702
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285
|||| || || ||||| | || || || || || || |||||||| || | || |||
Sbjct 29029 AATCGGAGAACAAGATGGAGGGTTGACTCCTTCTGGATATTGTAATCAGCAAGAGTACGC 29088
Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
| || || |||||||| || ||| | || | || |||||| || || || ||||| ||
Sbjct 29089 CCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGGGGGATTCCCTCC 29148
Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405
|| ||||| ||||| ||| ||| || | || || | || || || | |||
Sbjct 29149 TTGTCTTGAATTTTGGTCTTAACATTGTCAATAGTGTCGGAGCTCTCAACCTCCAAAGTA 29208
Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| ||||| || || |||||||| || |||||||||||
Sbjct 29209 ATAGTCTTCCCTGTTAAAGTTTTCACAAAAATTTGCAT 29246
>seq843
Length=130910
Score = 111 bits (122), Expect = 2e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | || |||||| ||||||| ||||||||| || |||||||||||||||||
Sbjct 120357 ACCCCCACGAAGTCGAAGCACCAGATGAAGCGTCGATTCCTTCTGAATGTTGTAATCTGC 120298
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | ||||| | || || || ||| | || | || || || || || ||
Sbjct 120297 AAGTGTTCTTCCATCTTCCAATTGTTTCCCAGCAAAGATTAAGCGTTGTTGATCTGGTGG 120238
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| |||||||| ||||| || || || ||| || | ||| || | || ||
Sbjct 120237 GATGCCTTCTTTGTCTTGGATCTTGGTTTTGACATTGTCGATTGTGTCCGATGATTCGAC 120178
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
||||| |||| ||| || || || | ||||| |||||||| ||||| ||
Sbjct 120177 TTCTAGGGTTATGGTTTTCCCAGTTAGGGTTTTCACGAAAATCTGCATCTT 120127
>seq319
Length=213347
Score = 105 bits (116), Expect = 7e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || || || |||||||||||||| || | ||| ||| | ||
Sbjct 181437 AGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTACGCCCATCC 181378
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| || ||| | || | || ||||||||| || || || || || || ||
Sbjct 181377 TCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATCCCCTCCTTGTCC 181318
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | || || | || || || | ||| | ||||
Sbjct 181317 TGGATCTTAGCCTTCACATTATCAATAGTGTCCGAGCTCTCAACCTCCAAAGTGATGGTC 181258
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
||||| ||||| || || || ||||| ||||||
Sbjct 181257 TTGCCAGTCAAGGTCTTCACAAAAATCTGCATT 181225
Score = 104 bits (114), Expect = 2e-17
Identities = 164/234 (70%), Gaps = 1/234 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || |||| || || || |||||||||||||| || || | ||| || ||||
Sbjct 180297 AGCACAAGGTGAAGAGTTGACTCCTTTTGAATGTTGTAGTCAGCTAGGGTTCGGCCGTCC 180238
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||| || ||||| | || |||| |||||||| || ||||| ||||| || |||
Sbjct 180237 TCTAGCTGTTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGGGGGAATCCCTTCCTTGTCT 180178
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | || || || || || | ||| | ||||
Sbjct 180177 TGGATCTTAGTCTTGACATTGTCAATGGTGTCGGAACTCTCGACCTCGAGAGTGATGGTC 180118
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAATAATGATACACTTAATT 64465
|| || || | || || ||||| |||||||| | ||||| | | | ||||||
Sbjct 180117 TTTCCAGTAAGGGTCTTAACGAAGATTTGCATCTATATAATCA-AAAATTAATT 180065
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | |||| || || || || || |||||||| || || | ||||| | ||
Sbjct 180753 AGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCC 180694
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| ||||| | || | || ||||||||| || ||||| || || || |||
Sbjct 180693 TCAAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCT 180634
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | ||||| | || ||||| | || | ||||
Sbjct 180633 TGAATCTTAGCCTTGACATTGTCAATGGTATCGGAGCTCTCGACTTCAAGGGTAATGGTC 180574
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| || || | ||| || || || |||||||||
Sbjct 180573 TTCCCTGTGAGAGTCTTCACAAAGATTTGCATT 180541
>seq338
Length=211836
Score = 100 bits (110), Expect = 3e-16
Identities = 138/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313
|||| || ||||||||||| || | || || ||||||||| ||||| ||||| | |
Sbjct 171299 CTTTCTGGATGTTGTAATCGGCTAGAGTACGGTTGTCTTCAAGTTGCTTTCCGGCGAAGA 171358
Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCT 64373
|||| ||||| || ||||| |||| |||||||| || || ||||| ||| ||| |
Sbjct 171359 TGAGGCGCTGTTGATCGGGTTGAATGCCTTCTTTGTCATGAATTTTAGCCTTGACATTGT 171418
Query 64374 CCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433
| || |||| | || || || | || | ||| || || || | |||||| || |
Sbjct 171419 TGATGGTGTCACTAGATTCAACCTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTCACAA 171478
Query 64434 AAATTTGCATTTT 64446
| |||||||||||
Sbjct 171479 ATATTTGCATTTT 171491
>seq51
Length=574565
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||| ||||| ||||||||||| || | || | | || || |||||||| ||
Sbjct 464363 GTTGATTCCTTTTGGATGTTGTAATCAGCCAAAGTCCTGCCATCCTCCAGCTGCTTCCCA 464304
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || | || ||||||||| || ||||| || || || ||||| || || |||
Sbjct 464303 GCAAAGATAATCCTCTGCTGGTCAGGTGGAATGCCCTCCTTATCTTGAATCTTCGTCTTC 464244
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | |||||| | || ||||||| || | ||| || || || | |||
Sbjct 464243 ACATTGTCAATTGTATCTGAGCTTTCAACTTCTAGGGTGATGGTTTTCCCAGTAAGAGTC 464184
Query 64427 TTTACGAAAATTTGCAT 64443
|| |||||||| |||||
Sbjct 464183 TTAACGAAAATCTGCAT 464167
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | ||| | || || | ||| | || || || || |||||||| || |||||
Sbjct 463938 ACCTCCCCTCAAACGGAGGACCAAATGCAGAGTAGACTCCTTCTGAATGTTATAGTCTGC 463879
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || | || ||||||||||| || ||| |||| |||| ||||||||| || ||
Sbjct 463878 AAGAGTCCGGCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCCGGTGG 463819
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| |||||||| || || || || ||| ||| ||| | || ||| | || ||
Sbjct 463818 GATCCCTTCTTTATCCTGGATCTTCGTCTTCACATTCTCAATGGTGTCAGAAGTTTCGAC 463759
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| | || | |||||||| || | || || || || || |||||
Sbjct 463758 TTCCAAGGTGATCGTCTTGCCTGTTAGGGTCTTGACAAAGATCTGCAT 463711
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | || || || ||||||||||||||||| || | ||| || | ||
Sbjct 464606 AGAACAAGATGGAGGGTAGACTCCTTTTGAATGTTGTAATCAGCCAAGGTTCGACCATCC 464547
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| | ||||| || ||| | ||||||| ||||||||| || || || || || || ||
Sbjct 464546 TCCAATTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATACCCTCCTTGTCC 464487
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| ||| | ||||||| | || || || | || | |||
Sbjct 464486 TGAATCTTAGTCTTCACATTCTCAATTGTATCAGAAGTCTCAACCTCGAGGGTGATAGTC 464427
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| ||||| | || || || || || |||||
Sbjct 464426 TTCCCGGTGAGGGTCTTCACAAAGATCTGCAT 464395
>seq28
Length=745672
Score = 86.0 bits (94), Expect = 6e-12
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315
|||||||||||||| || || | ||||| | |||||||||||||| |||||| | ||
Sbjct 696489 TTTTGAATGTTGTAGTCAGCAAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATC 696548
Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCT 64342
|||| ||||||||| || ||||| |||
Sbjct 696549 AGCCTCTGCTGGTCTGGTGGAATGCCT 696575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499574862219120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |