Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq20 116 4e-21
>seq20
Length=765589
Score = 116 bits (128), Expect = 4e-21
Identities = 253/373 (68%), Gaps = 7/373 (2%)
Strand=Plus/Minus
Query 37176 CATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAAT 37235
|| ||||||||||| || | ||||| |||| ||||| || || || ||||||||
Sbjct 522171 CAGGCAAAATCACAGTGAAGCCCTTCGTCTCGCGATATCAGCTCGTTTGAGAAGGTTAAA 522112
Query 37236 CCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCA-AAAGATCCAGAAAAGAA 37294
|| |||||||| || | ||||| | ||| || | || ||| ||| |||||| |||||
Sbjct 522111 CCCGGCATTAACCCACGCTTTTTGAGCCAGAAGA-TGGAGCAGAAACTTCCAGAGAAGAA 522053
Query 37295 AATACCTTCAACTGCTGCAAATGCTACAAGACGTGT-ACCGAAAGTTGAACTATAATCAG 37353
||| |||||||| ||||| || | | || | | | | || | | | | |||
Sbjct 522052 AATCCCTTCAACACAAGCAAAAGCAATCA-ACCTCTCAGCAAACGATTCAGCACCATC-- 521996
Query 37354 AAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTT 37413
|||||| | |||||||||||| |||||||| || |||||||||||
Sbjct 521995 -AATCCAACGAAGAGCCCAATCTGCCTTCTTCTTAACACAAGGGATAGTTTCAATTGCAC 521937
Query 37414 TTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACA 37473
|| ||| | | || | | |||| | || ||||| || | || | | ||||
Sbjct 521936 GAAAAAGATGGGTCTTAAGGTTAGAATCTTTGATGTAAGTTTCTAAAAGAAGAGAGTACA 521877
Query 37474 TTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATA 37533
||||||||||||| |||||||| || || || || ||||| ||| | |||||||| |
Sbjct 521876 TTTCAGAGTGAATGTTTTCAATGGCGATTTGGAAGCCATAGAAAGCGCGAGCTTCAGCAA 521817
Query 37534 ATTGAACATCGTT 37546
||||| || ||
Sbjct 521816 CCTGAACCTCCTT 521804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592233890455920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |