Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18] 11,198 sequences; 536,949,264 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq20 116 4e-21 >seq20 Length=765589 Score = 116 bits (128), Expect = 4e-21 Identities = 253/373 (68%), Gaps = 7/373 (2%) Strand=Plus/Minus Query 37176 CATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAAT 37235 || ||||||||||| || | ||||| |||| ||||| || || || |||||||| Sbjct 522171 CAGGCAAAATCACAGTGAAGCCCTTCGTCTCGCGATATCAGCTCGTTTGAGAAGGTTAAA 522112 Query 37236 CCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCA-AAAGATCCAGAAAAGAA 37294 || |||||||| || | ||||| | ||| || | || ||| ||| |||||| ||||| Sbjct 522111 CCCGGCATTAACCCACGCTTTTTGAGCCAGAAGA-TGGAGCAGAAACTTCCAGAGAAGAA 522053 Query 37295 AATACCTTCAACTGCTGCAAATGCTACAAGACGTGT-ACCGAAAGTTGAACTATAATCAG 37353 ||| |||||||| ||||| || | | || | | | | || | | | | ||| Sbjct 522052 AATCCCTTCAACACAAGCAAAAGCAATCA-ACCTCTCAGCAAACGATTCAGCACCATC-- 521996 Query 37354 AAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTT 37413 |||||| | |||||||||||| |||||||| || ||||||||||| Sbjct 521995 -AATCCAACGAAGAGCCCAATCTGCCTTCTTCTTAACACAAGGGATAGTTTCAATTGCAC 521937 Query 37414 TTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACA 37473 || ||| | | || | | |||| | || ||||| || | || | | |||| Sbjct 521936 GAAAAAGATGGGTCTTAAGGTTAGAATCTTTGATGTAAGTTTCTAAAAGAAGAGAGTACA 521877 Query 37474 TTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATA 37533 ||||||||||||| |||||||| || || || || ||||| ||| | |||||||| | Sbjct 521876 TTTCAGAGTGAATGTTTTCAATGGCGATTTGGAAGCCATAGAAAGCGCGAGCTTCAGCAA 521817 Query 37534 ATTGAACATCGTT 37546 ||||| || || Sbjct 521816 CCTGAACCTCCTT 521804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592233890455920