Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq355 147 2e-30
seq6 140 3e-28
seq843 138 9e-28
seq319 129 5e-25
seq51 125 6e-24
seq2834 118 8e-22
seq1360 118 8e-22
seq338 118 8e-22
seq441 104 2e-17
seq1427 102 6e-17
>seq355
Length=215899
Score = 147 bits (162), Expect = 2e-30
Identities = 170/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
|||||||||||||||| | || || ||||| ||||| || ||||| |||||||| || |
Sbjct 205296 TTCCTCCTCTTAAACGAAGCACCAAGTGAAGTGTAGACTCCTTTTGGATATTGTAGTCAG 205237
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| | || || |||| || | ||||| |||||||| || || | || ||||| || |
Sbjct 205236 CAAGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAGATTAACCTTTGCTGATCTGGGG 205177
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420
||||||| || ||||||||||| ||| || ||| | || | ||||| || | || |
Sbjct 205176 GAATGCCCTCCTTATCTTGAATCTTTGCCTTGACATTGTCAATGGTGTCTGAACTCTCGA 205117
Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
| || | ||||| ||| || || || ||||| || || ||||| |||||
Sbjct 205116 CCTCCAAAGTGATCGTCTTCCCAGTCAAAGTCTTGACGAATATTTGCAT 205068
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| | ||| | ||| | || ||||| |||||||| || |||||||| || |||
Sbjct 204382 CCCCCTCTAAGACGGAGAACAAGGTGGAGGGTCGATTCTTTCTGAATATTGTAGTCAGCG 204323
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| |||||| |||| |||| ||||| || ||||| |||| |||||| || || || |||
Sbjct 204322 AGCGTTCTGCCATCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGA 204263
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| || || ||||||||||| || || ||| | || | |||||| | | || ||
Sbjct 204262 ATTCCCTCCTTATCTTGAATCTTCGTCTTAACATTGTCGATGGTGTCAAAACTCTCAACC 204203
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| ||||| | ||||| ||||| | ||| || ||||| || |||||
Sbjct 204202 TCGAGAGTTATGGTTTTTCCGGTAAGAGTCTTAACAAAGATTTGCAT 204156
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
|||| ||||||||||| | || | ||| || || || || || || || ||||||| |
Sbjct 205068 TTCCACCTCTTAAACGGAGTACAAGATGGAGCGTTGACTCCTTCTGAATGGTGTAATCAG 205009
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| | || | |||| || | ||||| || ||||| |||| | |||||| || || |
Sbjct 205008 CAAGGGTGCGCCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTGGTCAGGGG 204949
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420
|||||||||| |||||||||||||| ||| ||| | || | ||||| || |||| |
Sbjct 204948 GAATGCCTTCCTTATCTTGAATTTTGGTTTTGACATTGTCAATGGTGTCGGAGCTTTCAA 204889
Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
| ||||| |||| || || ||||| | || || ||||| |||||||||
Sbjct 204888 CCTCAAGGGTGATTGTCTTCCCGGTGAGGGTCTTCACAAAGATCTGCATG 204839
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||||| ||| | ||| | || || || || || || || || |||||||| ||
Sbjct 204610 CCACCTCTTAGACGGAGAACAAGGTGGAGTGTCGACTCCTTCTGGATGTTGTAATCAGCA 204551
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| || | ||||| || ||||| ||||| | ||| || || || |||
Sbjct 204550 AGGGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGA 204491
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || |||||||||||| ||| || | || | ||||||||| | || |||
Sbjct 204490 ATACCTTCCTTGTCTTGAATTTTTGTTTTGACGTTATCAATAGTGTCAGAACTCTCAACT 204431
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| |||| || || ||||| | || || ||||| ||||||||
Sbjct 204430 TCAAGGGTGATAGTCTTCCCGGTGAGGGTCTTAACAAAAATCTGCAT 204384
>seq6
Length=1196388
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|||||||| || || | || || ||||||||||| || ||||| ||||||||||| ||
Sbjct 28792 CCTCCTCTCAAGCGCAGCACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAATCCGCA 28851
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || || |||| || | ||||| || ||||| ||||| | || || || || |||
Sbjct 28852 AGGGTCCTCCCATCATCAAGCTGCTTCCCGGCAAAGATCAACCTTTGCTGGTCCGGAGGA 28911
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || || ||||| || ||| ||| | || | ||||||||| | || ||
Sbjct 28912 ATGCCTTCCTTGTCCTGAATCTTGGCTTTGACATTATCAATAGTGTCAGAGCTCTCAACC 28971
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | ||||| || || || || ||||| || ||||| || |||||
Sbjct 28972 TCCAAAGTGATGGTCTTCCCTGTCAAAGTCTTAACAAAAATTTGCAT 29018
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||||||||| | || || ||||||||||| || ||||| ||||||||||| ||
Sbjct 28564 CCACCTCTTAAACGGAGCACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAATCTGCA 28623
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || || |||| || | ||||| || || || ||||| | ||| ||||| || |||
Sbjct 28624 AGGGTCCTCCCATCCTCAAGCTGCTTCCCGGCGAAAATCAACCTCTGCTGATCAGGGGGA 28683
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||| || || || || || || |||||| | || | |||||| || | || ||
Sbjct 28684 ATGCCCTCCTTGTCCTGGATCTTAGTCTTTACATTATCAATAGTGTCTGAGCTCTCAACC 28743
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | ||||| || || || || || || || ||||| ||||||||
Sbjct 28744 TCCAAAGTGATGGTCTTCCCTGTCAAGGTCTTAACAAAAATCTGCAT 28790
Score = 134 bits (148), Expect = 1e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
|||| |||||||| || | ||| | ||| ||||| || || || || ||||||||||| |
Sbjct 29018 TTCCACCTCTTAATCGGAGAACAAGATGGAGGGTTGACTCCTTCTGGATATTGTAATCAG 29077
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| | ||| | |||| || | ||||| || ||||| ||||| | ||| ||||| || |
Sbjct 29078 CAAGAGTACGCCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGGG 29137
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420
| || || || || ||||||||||| || ||| | || | |||||| || | || |
Sbjct 29138 GGATTCCCTCCTTGTCTTGAATTTTGGTCTTAACATTGTCAATAGTGTCGGAGCTCTCAA 29197
Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
| || | ||| | || || || ||||||||||| ||||| || |||||
Sbjct 29198 CCTCCAAAGTAATAGTCTTCCCTGTTAAAGTTTTCACAAAAATTTGCAT 29246
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||| ||||| || | || | ||| ||||| ||||| || || ||||||||||| ||
Sbjct 29248 CCTCCCCTTAATCGGAGCACAAGATGGAGGGTTGATTCCTTCTGGATATTGTAATCAGCA 29307
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| | |||| || | ||||| || ||||| ||||| | ||| ||||| || ||
Sbjct 29308 AGAGTACGCCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGGGGG 29367
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| || || || ||||||||||| || ||| | || | |||||| || | || ||
Sbjct 29368 ATTCCCTCCTTGTCTTGAATTTTGGTCTTAACATTGTCAATAGTGTCGGAGCTCTCAACC 29427
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | ||||| || || || || ||||| || ||||| || |||||
Sbjct 29428 TCCAAAGTGATGGTCTTCCCTGTCAAAGTCTTCACAAAAATTTGCAT 29474
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || ||||| || | || | ||| ||||| || || || || || |||||||| ||
Sbjct 29704 CCACCCCTTAATCGGAGCACAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGCA 29763
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| | |||| || | ||||| || ||||| ||||| | ||| ||||| || ||
Sbjct 29764 AGAGTACGTCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGGGGG 29823
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| |||||||| || ||||| || || ||| | || ||||||||||| |||| ||
Sbjct 29824 ATTCCTTCTTTGTCCTGAATCTTGGTCTTAACATTGTCGACAGTGTCAGAGCTTTCAACC 29883
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | || | ||||| || || ||||| |||||||| || |||||
Sbjct 29884 TCCAAGGTAATTGTTTTTCCTGTCAAAGTCTTTACAAAGATTTGCAT 29930
Score = 125 bits (138), Expect = 6e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || || || ||||| || || || || || || || || | |||| | |||| ||
Sbjct 29950 ACCAAGTGGAGAGTAGACTCCTTCTGGATGTTATAGTCTGCAAGGGTTCGGCCATCCTCG 30009
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| || ||||| ||||| |||| |||||| ||||| || ||||| |||||||||||||||
Sbjct 30010 AGCTGTTTACCAGCAAAGATCAGACGCTGCTGATCTGGGGGAATTCCTTCTTTATCTTGA 30069
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
||||| || ||| | || | || ||||| | || || |||||||| | | |||
Sbjct 30070 ATTTTGGTCTTCACATTATCAATCGTATCAGAACTCTCGACCTCAAGAGTTATGGACTTG 30129
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| |||| ||||| ||||| || |||||
Sbjct 30130 CCAGTTAGGGTTTTGACAAAAATTTGCAT 30158
>seq843
Length=130910
Score = 138 bits (152), Expect = 9e-28
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
|||||| || ||||| || || || |||||||| || | ||||| |||| ||||||||
Sbjct 120333 ATGAAGCGTCGATTCCTTCTGAATGTTGTAATCTGCAAGTGTTCTTCCATCTTCCAATTG 120274
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
|| || ||||| || || || |||||||| || || ||||||||||| ||||| || ||
Sbjct 120273 TTTCCCAGCAAAGATTAAGCGTTGTTGATCTGGTGGGATGCCTTCTTTGTCTTGGATCTT 120214
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
||| ||| | || | ||||| || | ||| ||||| || || | ||||| || ||
Sbjct 120213 GGTTTTGACATTGTCGATTGTGTCCGATGATTCGACTTCTAGGGTTATGGTTTTCCCAGT 120154
Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469
|| ||||| || || ||||||||
Sbjct 120153 TAGGGTTTTCACGAAAATCTGCAT 120130
>seq319
Length=213347
Score = 129 bits (142), Expect = 5e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
||||||| || ||||| | || || |||||||| || || || || ||||||||||| |
Sbjct 181226 TTCCTCCCCTCAAACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATATTGTAATCCG 181167
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| | ||| || |||| |||| ||||| || ||||| ||||| | ||| || || || |
Sbjct 181166 CAAGAGTCCTTCCATCTTCCAGCTGCTTCCCGGCAAAAATCAACCTCTGCTGGTCTGGGG 181107
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420
| |||||||| || || ||||| || || ||| | || | ||||| || | || |
Sbjct 181106 GGATGCCTTCCTTGTCCTGAATCTTCGCCTTGACATTGTCAATGGTGTCCGAGCTCTCAA 181047
Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
| || || |||| || || ||||| || || || || || ||||||||
Sbjct 181046 CCTCGAGGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 180998
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
||||||| || | ||| | || | ||||| || || || || || || ||||| ||||
Sbjct 180542 TTCCTCCCCTAAGACGGAGCACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGG 180483
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
||| |||| | |||| || | ||||| || ||||| || | | || || || || |
Sbjct 180482 CGAGGGTTCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTTTGCTGGTCTGGGG 180423
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420
| || ||||| || ||||||||||| || || | || | ||||| || |||| |
Sbjct 180422 GGATTCCTTCCTTGTCTTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCGA 180363
Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|||| || |||| || || || |||| ||||| ||||| ||||||||
Sbjct 180362 CTTCGAGGGTGATTGTCTTTCCTGTTAGGGTTTTGACAAAGATCTGCAT 180314
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || ||||||||||| || || || || ||||| ||||| | ||| | | |||| ||
Sbjct 180750 ACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCCTCA 180691
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||| || || || ||||| | ||| || || || ||||| || || || ||||||
Sbjct 180690 AGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGA 180631
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || ||| | || | || || || | || |||||||| || | || ||
Sbjct 180630 ATCTTAGCCTTGACATTGTCAATGGTATCGGAGCTCTCGACTTCAAGGGTAATGGTCTTC 180571
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | ||| || ||||| || |||||
Sbjct 180570 CCTGTGAGAGTCTTCACAAAGATTTGCAT 180542
Score = 102 bits (112), Expect = 6e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
||||||| || ||||| | || ||||| || || || || || || || ||||| || |
Sbjct 180998 TTCCTCCCCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAG 180939
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| | ||| | | |||| || | |||||||| || || ||||| | ||| || || || |
Sbjct 180938 CCAAAGTACGGCCATCCTCGAGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGGGG 180879
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420
| || ||||| || || ||||| || || ||| | || | ||||| || | || |
Sbjct 180878 GGATACCTTCCTTGTCCTGAATCTTGGTCTTAACATTGTCAATGGTGTCGGAGCTCTCAA 180819
Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
| || | ||| | || || || || | ||| || || |||||||||||
Sbjct 180818 CCTCCAAAGTAATGGTCTTCCCAGTAAGAGTCTTGACGAATATCTGCAT 180770
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||||||||| || || || || |||||||| || | || | |||| || | |||
Sbjct 181428 TGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTACGCCCATCCTCAAGCTGC 181369
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| ||||| ||||| | ||| || || || || || || || || || || || ||
Sbjct 181368 TTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATCCCCTCCTTGTCCTGGATCTTA 181309
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | |||||| || | || || || | ||||| || ||||| ||
Sbjct 181308 GCCTTCACATTATCAATAGTGTCCGAGCTCTCAACCTCCAAAGTGATGGTCTTGCCAGTC 181249
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
|| || || ||||| ||||||||
Sbjct 181248 AAGGTCTTCACAAAAATCTGCAT 181226
>seq51
Length=574565
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| | || | || || || ||||| ||||| ||||| || |||||||| ||
Sbjct 464393 CCACCTCTGAGGCGGAGGACCAAGTGCAGGGTTGATTCCTTTTGGATGTTGTAATCAGCC 464334
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| ||| |||| |||| ||||| || ||||| || | | ||| || || || |||
Sbjct 464333 AAAGTCCTGCCATCCTCCAGCTGCTTCCCAGCAAAGATAATCCTCTGCTGGTCAGGTGGA 464274
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||| || ||||||||||| || || ||| | || | || || || |||| |||
Sbjct 464273 ATGCCCTCCTTATCTTGAATCTTCGTCTTCACATTGTCAATTGTATCTGAGCTTTCAACT 464214
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || |||| ||||| || || | ||| || || || ||||||||
Sbjct 464213 TCTAGGGTGATGGTTTTCCCAGTAAGAGTCTTAACGAAAATCTGCAT 464167
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||| || ||||| | || ||||| || ||||| || || || || || || || ||
Sbjct 463937 CCTCCCCTCAAACGGAGGACCAAATGCAGAGTAGACTCCTTCTGAATGTTATAGTCTGCA 463878
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| | | |||| || | ||||| || ||||| || | | ||| || || || ||
Sbjct 463877 AGAGTCCGGCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCCGGTGGG 463818
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||||||||| || || || || ||| | || | |||||||| ||||| |||
Sbjct 463817 ATCCCTTCTTTATCCTGGATCTTCGTCTTCACATTCTCAATGGTGTCAGAAGTTTCGACT 463758
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | |||| ||| ||||| |||| || || ||||| ||||||||
Sbjct 463757 TCCAAGGTGATCGTCTTGCCTGTTAGGGTCTTGACAAAGATCTGCAT 463711
Score = 122 bits (134), Expect = 7e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332
|||||||| || || ||||||||||| || | || || |||| ||||| ||||| ||
Sbjct 464135 GTAGATTCCTTCTGAATATTGTAATCAGCCAATGTCCTTCCATCATCCAACTGCTTCCCG 464076
Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392
||||| |||| | ||| || || || ||||| || || || || ||||| ||| ||
Sbjct 464075 GCAAAGATCAGCCTCTGCTGGTCTGGTGGAATTCCCTCCTTGTCCTGAATCTTTGTCTTA 464016
Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452
|| | || | ||||||||| |||| ||||| || |||| ||||| || || | |||
Sbjct 464015 ACGTTATCGATAGTGTCAGAGCTTTCAACTTCCAGGGTGATGGTTTTTCCAGTGAGAGTC 463956
Query 101453 TTTACAAATATCTGCAT 101469
|| || || ||||||||
Sbjct 463955 TTCACGAAAATCTGCAT 463939
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| | ||| |||||||| || ||||| || |||||||| || | |||| |
Sbjct 464610 ACGGAGAACAAGATGGAGGGTAGACTCCTTTTGAATGTTGTAATCAGCCAAGGTTCGACC 464551
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| ||||||||||| || ||||| || | | ||| || || || || || || || ||
Sbjct 464550 ATCCTCCAATTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATACCCTCCTT 464491
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|| ||||| || || ||| | || | || ||||| || || || || || ||||
Sbjct 464490 GTCCTGAATCTTAGTCTTCACATTCTCAATTGTATCAGAAGTCTCAACCTCGAGGGTGAT 464431
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || ||||| | || || ||||| ||||||||
Sbjct 464430 AGTCTTCCCGGTGAGGGTCTTCACAAAGATCTGCAT 464395
>seq2834
Length=64598
Score = 118 bits (130), Expect = 8e-22
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|||||||| || || || || || ||||| ||||| | ||| | | |||| || | ||
Sbjct 910 TGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCTAAAGTGCGGCCATCTTCGAGCTGT 851
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || || | || ||||| ||||| || ||||||||||| ||||| || ||
Sbjct 850 TTTCCGGCGAAGATGAGGCGTTGTTGGTCGGGTGGGATGCCTTCTTTGTCTTGGATCTTG 791
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| ||| | || | |||||||| | ||| ||||| || || | ||||| || |||
Sbjct 790 GCTTTCACATTGTCGATTGTGTCAGAGGATTCGACTTCTAGGGTTATGGTTTTACCCGTT 731
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| ||||| || || ||||||||
Sbjct 730 AGGGTTTTCACGAAGATCTGCAT 708
>seq1360
Length=99280
Score = 118 bits (130), Expect = 8e-22
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|||||||| || || || || || ||||| ||||||| || | | | || || | ||
Sbjct 35114 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGTGTCCGGCCGTCTTCGAGCTGT 35173
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || ||||||| |||||| || || || ||||||||||| || ||||| || ||
Sbjct 35174 TTTCCGGCGAATATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTA 35233
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | ||||| || | ||| || || || || | ||||| ||||||
Sbjct 35234 GTCTTCACATTGTCGATCGTGTCTGAGGATTCAACCTCTAGGGTTATGGTTTTCCCGGTT 35293
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| ||||| || |||||||||||
Sbjct 35294 AGGGTTTTCACGAATATCTGCAT 35316
>seq338
Length=211836
Score = 118 bits (130), Expect = 8e-22
Identities = 140/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339
|||| || || ||||||||||| | ||| | | || || | |||||| || || || |
Sbjct 171299 CTTTCTGGATGTTGTAATCGGCTAGAGTACGGTTGTCTTCAAGTTGCTTTCCGGCGAAGA 171358
Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399
| | |||||||||||||| ||||||||||||| || |||||||| || ||| | |
Sbjct 171359 TGAGGCGCTGTTGATCGGGTTGAATGCCTTCTTTGTCATGAATTTTAGCCTTGACATTGT 171418
Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459
| |||||| | ||| || ||||| |||| ||||| || || | |||||| ||||
Sbjct 171419 TGATGGTGTCACTAGATTCAACCTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTCACAA 171478
Query 101460 ATATCTGCAT 101469
|||| |||||
Sbjct 171479 ATATTTGCAT 171488
>seq441
Length=193184
Score = 104 bits (114), Expect = 2e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 101247 CTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAG 101306
|||| | ||| | ||| | || ||||| ||||||| | |||||||| || |||| |
Sbjct 10397 CTCTAAGACGGAGAACAAGGTGGAGGGTCAATTCTTTCTTAATATTGTAGTCAGCGAGCG 10338
Query 101307 TTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGC 101366
|| || |||| |||| | ||| | ||||| |||| |||||| || || | ||||| |
Sbjct 10337 TTTTGCCATCCTCCAGCTACTTTCTAGCAAAGATCAGACGCTGCTGGTCTAGGGGAATTC 10278
Query 101367 CTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAA 101426
| || ||||||||||| || || ||| | || | |||||||| | || || || |
Sbjct 10277 CCTCCTTATCTTGAATCTTCGTCTTAACATTGTCAATGGTGTCAGAACTCTCAACCTCGA 10218
Query 101427 GAGTGACCGTTTTGCCGGTTAAAGT 101451
||| | ||||||||||| || ||
Sbjct 10217 TAGTTATGGTTTTGCCGGTAAATGT 10193
>seq1427
Length=108667
Score = 102 bits (112), Expect = 6e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| | |||||||| || || || || || ||||| ||||| | ||| | | |
Sbjct 17816 ACGAAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTAAAGTGCGGCC 17757
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| || | || || || || || || | ||| ||||| || || || |||||||||||
Sbjct 17756 ATCTTCGAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCTTCTTT 17697
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|| || || || ||| ||| | || | || || || | ||| || || || || |
Sbjct 17696 GTCCTGGATCTTGGCTTTGACATTGTCGATGGTATCGGAGGATTCGACCTCTAGGGTTAT 17637
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| || |||| ||||| || || ||||||||
Sbjct 17636 GGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 17601
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396224317657686
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |