Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq843 96.9 3e-15
seq51 82.4 6e-11
>seq843
Length=130910
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 28550 AAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609
||| ||||| || || || ||||| |||| || |||||||| ||| ||| ||| |
Sbjct 120126 AAAGATGCAGATTTTCGTGAAAACCCTAACTGGGAAAACCATAACCCTAGAAGTCGAATC 120185
Query 28610 TTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669
|| || || | | | || |||| || ||| |||||||| || | || |||
Sbjct 120186 ATCGGACACAATCGACAATGTCAAAACCAAGATCCAAGACAAAGAAGGCATCCCACCAGA 120245
Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729
|||||| | | |||||||| || ||||||||||||||| | ||| | || |||||
Sbjct 120246 TCAACAACGCTTAATCTTTGCTGGGAAACAATTGGAAGATGGAAGAACACTTGCAGATTA 120305
Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGT 28762
|||||||| || ||||| || || || ||||
Sbjct 120306 CAACATTCAGAAGGAATCGACGCTTCATCTGGT 120338
>seq51
Length=574565
Score = 82.4 bits (90), Expect = 6e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 28647 GACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAA 28706
||||| ||||| | ||| ||| || ||||| || |||||||| || || ||||||||
Sbjct 464488 GACAAGGAGGGTATCCCCCCAGACCAGCAGAGGCTCATCTTTGCTGGGAAGCAATTGGAG 464547
Query 28707 GATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCA 28756
||| | ||| |||| ||||| ||||||||||| || ||||| || ||
Sbjct 464548 GATGGTCGAACCTTGGCTGATTACAACATTCAAAAGGAGTCTACCCTCCA 464597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425346742614042
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |