Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18] 11,198 sequences; 536,949,264 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq814 93.3 1e-14 >seq814 Length=133700 Score = 93.3 bits (102), Expect = 1e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 41922 ACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATGCTAGCTTTA 41981 ||| ||| || |||||||| || ||||| ||| | | ||||| ||||||||||| || | Sbjct 56309 ACACTATCGTAGCTGCTCATGGTTATTTCGGTTGATTGATCTTTCAATATGCTAGTTTCA 56250 Query 41982 ATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTTT 42040 | || || || | | || ||||| | ||||| |||||||| ||||||||||||||| Sbjct 56249 ACAACTCTTGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTT 56191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146194956957392