Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq843 167 2e-36
seq2834 134 1e-26
seq355 122 8e-23
seq319 122 8e-23
seq6 122 8e-23
seq1427 120 3e-22
seq51 120 3e-22
seq1360 114 1e-20
>seq843
Length=130910
Score = 167 bits (184), Expect = 2e-36
Identities = 176/229 (77%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | ||||| ||||| || ||||| || || || ||||| ||| | |
Sbjct 120129 GATGCAGATTTTCGTGAAAACCCTAACTGGGAAAACCATAACCCTAGAAGTCGAATCATC 120188
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || ||| |||||||||||||||||||| || || || |||||
Sbjct 120189 GGACACAATCGACAATGTCAAAACCAAGATCCAAGACAAAGAAGGCATCCCACCAGATCA 120248
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAA-ACATGTCAGATTATA 24881
|||||| || |||||||| |||||||| |||| ||| |||| || || ||||||| |
Sbjct 120249 ACAACGCTTAATCTTTGCTGGGAAACAATTGGAAGATGGAAGAACACTTG-CAGATTACA 120307
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||| ||||||||||| || || ||||| | ||| | || || ||
Sbjct 120308 ACATTCAGAAGGAATCGACGCTTCATCTGGTGCTTCGACTTCGTGGGGG 120356
>seq2834
Length=64598
Score = 134 bits (148), Expect = 1e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| ||||| |||||||| || || || ||||| ||| || |
Sbjct 708 ATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAAGTCGAATCCTCT 767
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || ||| |||||||||||||||||||| || || ||||| |||
Sbjct 768 GACACAATCGACAATGTGAAAGCCAAGATCCAAGACAAAGAAGGCATCCCACCCGACCAA 827
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||| | ||||| ||||| |||||||| || ||| | | | | || || |||
Sbjct 828 CAACGCCTCATCTTCGCCGGAAAACAGCTCGAAGATGGCCGCACTTTAGCCGACTACAAC 887
Query 24884 ATTCAAAAGGAATCGACACTACAC 24907
|| || ||||| || || || |||
Sbjct 888 ATCCAGAAGGAGTCAACCCTTCAC 911
>seq355
Length=215899
Score = 122 bits (134), Expect = 8e-23
Identities = 152/206 (74%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| ||| |||| || || ||||| || ||||| || || ||||| || |
Sbjct 204383 GATGCAGATTTTTGTTAAGACCCTCACCGGGAAGACTATCACCCTTGAAGTTGAGAGTTC 204442
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||||| | || |||| ||||||||| || |||||||| ||||| || || || || |
Sbjct 204443 TGACACTATTGATAACGTCAAAACAAAA-ATTCAAGACAAGGAAGGTATTCCCCCAGACC 204501
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || | |||||||||||||| || ||||| || ||| | | | | | ||||| |
Sbjct 204502 AGCAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACCCTTGCTGATTACA 204561
Query 24882 ACATTCAAAAGGAATCGACACTACAC 24907
|||| || ||||| |||||||| |||
Sbjct 204562 ACATCCAGAAGGAGTCGACACTCCAC 204587
Score = 120 bits (132), Expect = 3e-22
Identities = 154/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || ||||| || || || || ||| | |
Sbjct 204612 ATGCAGATCTTTGTAAAGACCCTCACTGGGAAGACTATCACCCTTGAGGTTGAAAGCTCT 204671
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || || | |||||| ||| ||||||||||| ||||| || || || || ||
Sbjct 204672 GACACTATTGATAATGTTAAAACCAAA-ATCCAAGACAAGGAAGGTATTCCCCCAGACCA 204730
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||||||||||||| |||||||| |||||| | | | | ||||| ||
Sbjct 204731 GCAGAGGTTGATCTTTGCCGGAAAACAGCTTGAGGATGGCCGCACTCTTGCTGATTACAA 204790
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || ||||| || || || ||| ||||
Sbjct 204791 CATCCAGAAGGAGTCAACCCTCCACCTGGT 204820
Score = 107 bits (118), Expect = 2e-18
Identities = 149/206 (72%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| |||||| |||| || || ||||| ||||| || || ||||| || ||
Sbjct 204155 GATGCAAATCTTTGTTAAGACTCTTACCGGAAAAACCATAACTCTCGAGGTTGAGAGTTT 204214
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||||| | || || | ||| || || ||| ||||| || || ||||| || || || |
Sbjct 204215 TGACACCATCGACAATGTTAAGACGAA-GATTCAAGATAAGGAGGGAATTCCCCCAGACC 204273
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || ||| |||||||||| || || |||||||||||| |||| | | || || |
Sbjct 204274 AGCAGCGTCTGATCTTTGCTGGAAAGCAGCTGGAGGATGGCAGAACGCTCGCTGACTACA 204333
Query 24882 ACATTCAAAAGGAATCGACACTACAC 24907
| ||||| || |||||||| || |||
Sbjct 204334 ATATTCAGAAAGAATCGACCCTCCAC 204359
Score = 105 bits (116), Expect = 6e-18
Identities = 151/209 (72%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || ||||| || || || || || || || ||| | ||
Sbjct 204840 ATGCAGATCTTTGTGAAGACCCTCACCGGGAAGACAATCACCCTTGAGGTTGAAAGCTCC 204899
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || || | ||||| ||| || ||||| || ||||| || || || || ||
Sbjct 204900 GACACCATTGACAATGTCAAAACCAAA-ATTCAAGATAAGGAAGGCATTCCCCCTGACCA 204958
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | |||||||||| || || ||||| |||||| | | | | | | ||||| |
Sbjct 204959 ACAGAGACTGATCTTTGCTGGAAAGCAGCTTGAGGATGGGCGCACCCTTGCTGATTACAC 205018
Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910
|||||| ||||| || || || || ||||
Sbjct 205019 CATTCAGAAGGAGTCAACGCTCCATCTTG 205047
>seq319
Length=213347
Score = 122 bits (134), Expect = 8e-23
Identities = 155/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | ||||| ||||| || || || || || |||||||| ||| | ||
Sbjct 180314 ATGCAGATCTTTGTCAAAACCCTAACAGGAAAGACAATCACCCTCGAAGTCGAAAGCTCC 180373
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| || | ||| || |||||||| |||||||| || || || ||
Sbjct 180374 GACACCATTGACAACGTCAAGGCCAAA-ATTCAAGACAAGGAAGGAATCCCCCCAGACCA 180432
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | | ||||||||||| || ||||| |||||| ||| | | | || || ||
Sbjct 180433 GCAAAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGAACCCTCGCCGACTACAA 180492
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
||| || ||||| || || || ||| | |||
Sbjct 180493 CATCCAGAAGGAGTCCACTCTTCACCTTGTG 180523
Score = 105 bits (116), Expect = 6e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| ||||| |||| || || || || || || || || ||||| || || |
Sbjct 180085 GATGCAAATCTTCGTTAAGACCCTTACTGGAAAGACCATCACTCTCGAGGTCGAGAGTTC 180144
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || |||||||||||||| ||||| || || || || ||
Sbjct 180145 CGACACCATTGACAATGTCAAGACTAAGATCCAAGACAAGGAAGGGATTCCCCCAGACCA 180204
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | ||||||| ||||| |||||||| ||||| ||| | | | || || ||
Sbjct 180205 GCAAAGGCTGATCTTCGCCGGAAAACAGCTAGAGGACGGCCGAACCCTAGCTGACTACAA 180264
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
|||||||||||| || || || ||| | |||
Sbjct 180265 CATTCAAAAGGAGTCAACTCTTCACCTTGTG 180295
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || | ||||| || || || || ||||| || || | |
Sbjct 180998 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCCTCGAGGTTGAGAGCTCG 181057
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| ||||| || || || || ||
Sbjct 181058 GACACCATTGACAATGTCAAGGCGAAGATTCAGGACAAGGAAGGCATCCCCCCAGACCAG 181117
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||| ||||||||||| |||||||| ||| || | | | ||||| ||
Sbjct 181118 CAGAGGTTGATTTTTGCCGGGAAGCAGCTGGAAGATGGAAGGACTCTTGCGGATTACAAT 181177
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || || ||||||||| | || ||| | |||||
Sbjct 181178 ATCCAGAAGGAGTCAACCCTTCACTTGGTGCTCCGTTTGAGGGGAGG 181224
>seq6
Length=1196388
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || ||| |||| || | || || || || || || | || || || | |
Sbjct 29018 ATGCAAATTTTTGTTAAGACTTTGACAGGGAAGACCATCACTTTGGAGGTTGAGAGCTCT 28959
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||||| || ||||| ||||| || ||||| || ||
Sbjct 28958 GACACTATTGATAATGTCAAAGCCAAGATTCAGGACAAGGAAGGCATTCCTCCGGACCAG 28899
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | ||||||||||||||||| ||||| || ||| ||| | | | | ||||| ||
Sbjct 28898 CAAAGGTTGATCTTTGCCGGGAAGCAGCTTGATGATGGGAGGACCCTTGCGGATTACAAT 28839
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| |||||||| || || || ||||||||| |||| ||| | |||||
Sbjct 28838 ATCCAAAAGGAGTCTACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 28792
Score = 114 bits (126), Expect = 1e-20
Identities = 154/212 (73%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || ||| | ||||| ||||| || || | || || || || || || |
Sbjct 30159 GATGCAAATTTTTGTCAAAACCCTAACTGGCAAGTCCATAACTCTTGAGGTCGAGAGTTC 30100
Query 24763 CGACACAGTAGAAACGGTAAA-ACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
|| || | || | || || || ||| || ||||| ||||||||||| || || ||||
Sbjct 30099 TGATACGATTGATAATGTGAAGACCAAA-ATTCAAGATAAAGAAGGAATTCCCCCAGATC 30041
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || ||| |||||||||| || |||||||| |||||| ||| | | |||| ||||
Sbjct 30040 AGCAGCGTCTGATCTTTGCTGGTAAACAGCTCGAGGATGGCCGAACCCTTGCAGACTATA 29981
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913
|||| || ||||| || || || |||||||||
Sbjct 29980 ACATCCAGAAGGAGTCTACTCTCCACTTGGTG 29949
Score = 109 bits (120), Expect = 5e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || | || || ||||| ||||| | || || ||| | |
Sbjct 29930 ATGCAAATCTTTGTAAAGACTTTGACAGGAAAAACAATTACCTTGGAGGTTGAAAGCTCT 29871
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| || || || | ||| || || ||| || |||||||||||||| || || |||||
Sbjct 29870 GACACTGTCGACAATGTTAAGACCAA-GATTCAGGACAAAGAAGGAATCCCCCCGGATCA 29812
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||| ||||| ||||| |||||| | | | | ||||| ||
Sbjct 29811 GCAGAGGTTGATCTTTGCTGGGAAGCAGCTCGAGGATGGACGTACTCTTGCTGATTACAA 29752
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
||| || ||||| || || || || | ||| | |||||
Sbjct 29751 CATCCAGAAGGAGTCAACCCTCCATCTTGTGCTCCGATT 29713
Score = 100 bits (110), Expect = 3e-16
Identities = 150/209 (72%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || ||| | ||||| |||| || || |||||||| | || || || | ||
Sbjct 29246 ATGCAAATTTTTGTGAAAACTTTAACAGGGAAGACTATTACTTTGGAGGTTGAGAGCTCC 29187
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || || | ||| || ||| || |||||||| || ||||| || || |||||
Sbjct 29186 GACACTATTGACAATGTTAAGACCAAA-ATTCAAGACAAGGAGGGAATCCCCCCAGATCA 29128
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||| ||||| ||||| |||||| | | | | | ||||| ||
Sbjct 29127 GCAGAGGTTGATCTTTGCTGGGAAGCAGCTCGAGGATGGGCGTACTCTTGCTGATTACAA 29068
Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910
|| || ||||| || || || || ||||
Sbjct 29067 TATCCAGAAGGAGTCAACCCTCCATCTTG 29039
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || ||| | || || | || || || || || || | || || || | ||
Sbjct 29474 ATGCAAATTTTTGTGAAGACTTTGACAGGGAAGACCATCACTTTGGAGGTTGAGAGCTCC 29415
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || || | ||| || ||| || |||||||| || ||||| || || |||||
Sbjct 29414 GACACTATTGACAATGTTAAGACCAAA-ATTCAAGACAAGGAGGGAATCCCCCCAGATCA 29356
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||| ||||| ||||| |||||| | | | | | ||||| ||
Sbjct 29355 GCAGAGGTTGATCTTTGCTGGGAAGCAGCTCGAGGATGGGCGTACTCTTGCTGATTACAA 29296
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || |||||||| || || || | ||| | ||||| | |||||
Sbjct 29295 TATCCAGAAGGAATCAACCCTCCATCTTGTGCTCCGATTAAGGGGAGG 29248
>seq1427
Length=108667
Score = 120 bits (132), Expect = 3e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| ||||| |||||||| || || || || || ||| || ||
Sbjct 17601 ATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTCGAATCCTCC 17660
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || ||| |||||||| ||||||||||| || || || || |||
Sbjct 17661 GATACCATCGACAATGTCAAAGCCAAGATCCAGGACAAAGAAGGCATCCCACCAGACCAA 17720
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||| | ||||| ||||| |||||||| || ||| | | | | || || |||
Sbjct 17721 CAACGTCTCATCTTCGCCGGAAAACAGCTCGAAGATGGCCGCACTTTAGCCGACTACAAC 17780
Query 24884 ATTCAAAAGGAATCGACACTACAC 24907
|| || ||||| || || || |||
Sbjct 17781 ATCCAGAAGGAGTCCACCCTTCAC 17804
>seq51
Length=574565
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || || || ||||| || || || ||||| ||| | |
Sbjct 463939 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAAACCATCACCCTGGAAGTTGAAAGCTCT 463998
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| ||| ||||| ||| || ||||| || ||||| || || || ||
Sbjct 463999 GACACTATCGATAACGTTAAGACAAA-GATTCAGGACAAGGAGGGAATTCCACCAGACCA 464057
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||||||||||||||| ||| |||| ||| || | || | ||||| ||
Sbjct 464058 GCAGAGGCTGATCTTTGCCGGGAAGCAGTTGGATGATGGAAGGACATTGGCTGATTACAA 464117
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| |||||||| || | ||| ||||| | || ||| | |||||
Sbjct 464118 TATTCAGAAGGAATCTACTTTGCACCTGGTGCTTCGGTTGAGGGGAGG 464165
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || |||| || || || || ||||| || || || ||||| ||| | |
Sbjct 464167 ATGCAGATTTTCGTTAAGACTCTTACTGGGAAAACCATCACCCTAGAAGTTGAAAGCTCA 464226
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| ||| | || | || || ||||| ||||| || || || || || || || ||
Sbjct 464227 GATACAATTGACAATGTGAAGACGAAGATTCAAGATAAGGAGGGCATTCCACCTGACCAG 464286
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | |||||||| ||||| |||||||||||| || | || | ||||| |||
Sbjct 464287 CAGAGGATTATCTTTGCTGGGAAGCAGCTGGAGGATGGCAGGACTTTGGCTGATTACAAC 464346
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| ||||||||||| || || ||||||||
Sbjct 464347 ATCCAAAAGGAATCAACCCTGCACTTGGT 464375
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || ||||| || || || || || | ||||| ||| | |
Sbjct 463711 ATGCAGATCTTTGTCAAGACCCTAACAGGCAAGACGATCACCTTGGAAGTCGAAACTTCT 463770
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| || |||||||| || || || || ||
Sbjct 463771 GACACCATTGAGAATGTGAAGACGAAGATCCAGGATAAAGAAGGGATCCCACCGGACCAG 463830
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT-TCGAGAAACATGTCAGATTATAA 24882
|| | | || ||||| ||||| ||||| |||||| | || | || |||| |||||
Sbjct 463831 CAGAGGCTTATTTTTGCTGGGAAGCAGCTTGAGGATGGCCGGACTCTTG-CAGACTATAA 463889
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||| ||||| || || || || ||||| | || ||| | |||||
Sbjct 463890 CATTCAGAAGGAGTCTACTCTGCATTTGGTCCTCCGTTTGAGGGGAGG 463937
Score = 102 bits (112), Expect = 7e-17
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || ||||| || ||||| || ||||| || || | |
Sbjct 464395 ATGCAGATCTTTGTGAAGACCCTCACCGGGAAGACTATCACCCTCGAGGTTGAGACTTCT 464454
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| ||| | || | || || ||||| || ||||| || || || || || || ||
Sbjct 464455 GATACAATTGAGAATGTGAAGACTAAGATTCAGGACAAGGAGGGTATCCCCCCAGACCAG 464514
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | |||||||| ||||| || |||||||| ||| | || | ||||| |||
Sbjct 464515 CAGAGGCTCATCTTTGCTGGGAAGCAATTGGAGGATGGTCGAACCTTGGCTGATTACAAC 464574
Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910
||||||||||| || || || || ||||
Sbjct 464575 ATTCAAAAGGAGTCTACCCTCCATCTTG 464602
>seq1360
Length=99280
Score = 114 bits (126), Expect = 1e-20
Identities = 154/212 (73%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | ||||| |||||||| ||||| || || || || || ||| || |
Sbjct 35317 GATGCAGATATTCGTGAAAACCCTAACCGGGAAAACCATAACCCTAGAGGTTGAATCCTC 35258
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||||||||| ||||| || || || || ||
Sbjct 35257 AGACACGATCGACAATGTGAAGACTAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCA 35198
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA-TTCGAGAAACATGTCAGATTATA 24881
|| ||| |||| || ||||| |||||||| || || | || || | | || || |
Sbjct 35197 GCAGCGTCTGATATTCGCCGGAAAACAGCTCGAAGACGGCCGGACAC-TCGCCGACTACA 35139
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913
|||| || ||||| ||||| || ||| |||||
Sbjct 35138 ACATCCAGAAGGAGTCGACCCTTCACCTGGTG 35107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449834625583440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |