Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18] 11,198 sequences; 536,949,264 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq20 98.7 2e-14 >seq20 Length=765589 Score = 98.7 bits (108), Expect = 2e-14 Identities = 159/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 793907 ATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 793966 |||||| || || | | ||| || || || ||||| || | || |||||||||||||| Sbjct 522457 ATACTCCCCAACTCTCTTCTCAAAGAAATTAGTCTTCCCTTGAAGAGAGATCAACTCCAT 522398 Query 793967 CCACGGGAACGGGTTG-GCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGC 794025 ||| ||||||||| | || | || ||| || ||||| || | || | ||| | Sbjct 522397 CCAATCGAACGGGTTCTGAACTCCG-TAAACCTTTTCACACCCAAGTGCAGCCAACAGCC 522339 Query 794026 GGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCA 794085 ||| || || || ||||||||||||| ||| || | |||||| || | ||| || Sbjct 522338 TGTCTGCAACAAACTCAATGTACTGGCTCATCAGCTCACAGTTCATCCCAACCAGCTTCA 522279 Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTC 794131 | || |||| ||| | || |||||| |||||| ||||| || || Sbjct 522278 CCGGAAGCGCATCGGTTACGAACTCTCGCTCGATTTCGACTGCATC 522233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915055217665922