Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq20 98.7 2e-14
>seq20
Length=765589
Score = 98.7 bits (108), Expect = 2e-14
Identities = 159/226 (70%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 793907 ATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 793966
|||||| || || | | ||| || || || ||||| || | || ||||||||||||||
Sbjct 522457 ATACTCCCCAACTCTCTTCTCAAAGAAATTAGTCTTCCCTTGAAGAGAGATCAACTCCAT 522398
Query 793967 CCACGGGAACGGGTTG-GCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGC 794025
||| ||||||||| | || | || ||| || ||||| || | || | ||| |
Sbjct 522397 CCAATCGAACGGGTTCTGAACTCCG-TAAACCTTTTCACACCCAAGTGCAGCCAACAGCC 522339
Query 794026 GGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCA 794085
||| || || || ||||||||||||| ||| || | |||||| || | ||| ||
Sbjct 522338 TGTCTGCAACAAACTCAATGTACTGGCTCATCAGCTCACAGTTCATCCCAACCAGCTTCA 522279
Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTC 794131
| || |||| ||| | || |||||| |||||| ||||| || ||
Sbjct 522278 CCGGAAGCGCATCGGTTACGAACTCTCGCTCGATTTCGACTGCATC 522233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915055217665922
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |