Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq51 152 1e-31
seq319 141 2e-28
seq2834 136 9e-27
seq6 127 5e-24
seq355 125 2e-23
seq1427 114 3e-20
seq1360 102 2e-16
seq843 93.3 1e-13
>seq51
Length=574565
Score = 152 bits (168), Expect = 1e-31
Identities = 150/194 (77%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| |||||||| ||||| ||||||| ||||| |||||||| ||||
Sbjct 463954 AAGACTCTCACTGGAAAAACCATCACCCTGGAAGTTGAAAGCTCTGACACTATCGATAAC 464013
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||||||| || || || |||||| || ||| || || || |||||
Sbjct 464014 GTTAAGACAAAGATTCAGGACAAGGAGGGAATTCCACCAGACCAGCAGAGGCTGATCTTT 464073
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| ||||||||||| ||||||||||| ||||| |||||||| | ||||| || |||
Sbjct 464074 GCCGGGAAGCAGTTGGATGATGGAAGGACATTGGCTGATTACAATATTCAGAAGGAATCT 464133
Query 206365 ACTCTTCACCTTGT 206378
||| | ||||| ||
Sbjct 464134 ACTTTGCACCTGGT 464147
Score = 122 bits (134), Expect = 2e-22
Identities = 147/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || || ||||| || |||||||| |||||||| |||| |||||||
Sbjct 463714 CAGATCTTTGTCAAGACCCTAACAGGCAAGACGATCACCTTGGAAGTCGAAACTTCTGAC 463773
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || |||||||| || |||||| ||
Sbjct 463774 ACCATTGAGAATGTGAAGACGAAGATCCAGGATAAAGAAGGGATCCCACCGGACCAGCAG 463833
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| ||||| || || || |||||| | || ||||| ||||| | || || || ||| |
Sbjct 463834 AGGCTTATTTTTGCTGGGAAGCAGCTTGAGGATGGCCGGACTCTTGCAGACTATAACATT 463893
Query 206353 CAGAAAGAGTCTACTCTTCA 206372
||||| ||||||||||| ||
Sbjct 463894 CAGAAGGAGTCTACTCTGCA 463913
Score = 111 bits (122), Expect = 4e-19
Identities = 138/189 (73%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || ||||| ||||| | ||||| ||||| || || ||| | ||
Sbjct 464182 AAGACTCTTACTGGGAAAACCATCACCCTAGAAGTTGAAAGCTCAGATACAATTGACAAT 464241
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||||||||| || || || ||| || ||| || || |||||||
Sbjct 464242 GTGAAGACGAAGATTCAAGATAAGGAGGGCATTCCACCTGACCAGCAGAGGATTATCTTT 464301
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| |||| ||||| ||||||||||| ||||||||| |||| || || ||
Sbjct 464302 GCTGGGAAGCAGCTGGAGGATGGCAGGACTTTGGCTGATTACAACATCCAAAAGGAATCA 464361
Query 206365 ACTCTTCAC 206373
|| || |||
Sbjct 464362 ACCCTGCAC 464370
Score = 102 bits (112), Expect = 2e-16
Identities = 136/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || || || ||||| | || ||||| | ||||||||| | ||
Sbjct 463498 AAAACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGACTTCTGACACTATTGAGAAT 463557
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| || ||||| || || || || || |||||| || || || ||||||
Sbjct 463558 GTCAAGACCAAAATTCAGGATAAGGAGGGTATCCCACCGGACCAGCAGAGGCTCATCTTC 463617
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||||||||| ||||| || ||| | || || |||||| |||| || |||||
Sbjct 463618 GCTGGTAAGCAGTTGGATGATGGCAGAACTCTAGCTGACTACAACATCCAAAAGGAGTCC 463677
Query 206365 ACTCTTCAC 206373
||||| |||
Sbjct 463678 ACTCTCCAC 463686
Score = 86.0 bits (94), Expect = 1e-11
Identities = 70/85 (82%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823
|| ||||| | |||||| || ||||| | ||| || |||||||| ||||||||||| |||
Sbjct 464147 ACCAGGTGCAAAGTAGATTCCTTCTGAATATTGTAATCAGCCAATGTCCTTCCATCATCC 464088
Query 204824 AGCTGCTTTCCGGCGAAGATAAGCC 204848
| |||||| ||||| ||||| ||||
Sbjct 464087 AACTGCTTCCCGGCAAAGATCAGCC 464063
>seq319
Length=213347
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| |||||| || |||||||| || ||||| | ||||| ||||| || |||
Sbjct 180317 CAGATCTTTGTCAAAACCCTAACAGGAAAGACAATCACCCTCGAAGTCGAAAGCTCCGAC 180376
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| || |||||||| || |||||||| || ||| |||
Sbjct 180377 ACCATTGACAACGTCAAGGCCAAAATTCAAGACAAGGAAGGAATCCCCCCAGACCAGCAA 180436
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| || ||||| |||||||||||| | || ||||| | || | ||||| |||||| ||
Sbjct 180437 AGGCTCATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGAACCCTCGCCGACTACAACATC 180496
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| ||||||||||||||
Sbjct 180497 CAGAAGGAGTCCACTCTTCACCTTGT 180522
Score = 107 bits (118), Expect = 5e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || ||||| || |||||| | || || || ||||| ||||| | ||
Sbjct 180101 AAGACCCTTACTGGAAAGACCATCACTCTCGAGGTCGAGAGTTCCGACACCATTGACAAT 180160
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| || ||||| ||| || ||| ||||| || ||||||
Sbjct 180161 GTCAAGACTAAGATCCAAGACAAGGAAGGGATTCCCCCAGACCAGCAAAGGCTGATCTTC 180220
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||| ||| | || || || | || | || || |||||| | || || |||||
Sbjct 180221 GCCGGAAAACAGCTAGAGGACGGCCGAACCCTAGCTGACTACAACATTCAAAAGGAGTCA 180280
Query 206365 ACTCTTCACCTTGT 206378
||||||||||||||
Sbjct 180281 ACTCTTCACCTTGT 180294
Score = 107 bits (118), Expect = 5e-18
Identities = 137/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || |||||||| || || || || | ||||| || || || || || | ||
Sbjct 180557 AAGACTCTCACAGGGAAGACCATTACCCTTGAAGTCGAGAGCTCCGATACCATTGACAAT 180616
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||||||||| || || || ||| || ||| || || | ||||||
Sbjct 180617 GTCAAGGCTAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAGCAGAGGTTGATCTTC 180676
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||| | || ||||| | ||| | ||||| |||||| ||||||| ||||||
Sbjct 180677 GCCGGAAAGCAGCTTGAGGATGGCCGCACTCTTGCCGACTACAACATCCAGAAGGAGTCT 180736
Query 206365 ACTCTTCAC 206373
|| ||||||
Sbjct 180737 ACCCTTCAC 180745
Score = 102 bits (112), Expect = 2e-16
Identities = 143/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || ||||| || ||||| | || || || || || |||
Sbjct 181001 CAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCCTCGAGGTTGAGAGCTCGGAC 181060
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||||| || || ||||| || || ||| ||
Sbjct 181061 ACCATTGACAATGTCAAGGCGAAGATTCAGGACAAGGAAGGCATCCCCCCAGACCAGCAG 181120
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | || || ||||| |||||| ||||||||||||||||| | || |||||||| ||
Sbjct 181121 AGGTTGATTTTTGCCGGGAAGCAGCTGGAAGATGGAAGGACTCTTGCGGATTACAATATC 181180
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
||||| ||||| || ||||||
Sbjct 181181 CAGAAGGAGTCAACCCTTCAC 181201
Score = 87.8 bits (96), Expect = 4e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || || || || ||||||||||| || || || || |||
Sbjct 181229 CAGATTTTTGTGAAGACCTTGACTGGCAAGACCATCACTTTGGAGGTTGAGAGCTCGGAC 181288
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || || || || || || ||| ||
Sbjct 181289 ACTATTGATAATGTGAAGGCTAAGATCCAGGACAAGGAGGGGATCCCCCCAGACCAGCAG 181348
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | ||||| || || |||||| | || ||||| | || | || ||||||||| |
Sbjct 181349 AGGTTGATCTTTGCTGGTAAGCAGCTTGAGGATGGGCGTACCCTTGCTGATTACAACATT 181408
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| |||||||| |||||||||||
Sbjct 181409 CAGAAGGAGTCTACCCTTCACCTTGT 181434
Score = 86.0 bits (94), Expect = 1e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823
|||||||||||||| ||||| ||||||| || ||||| || | || | ||||| ||
Sbjct 180522 ACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCCATCCTCG 180463
Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||||||||||| ||||| |||| ||| ||
Sbjct 180462 AGCTGCTTTCCGGCAAAGATGAGCCTTTGCTG 180431
>seq2834
Length=64598
Score = 136 bits (150), Expect = 9e-27
Identities = 156/207 (75%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || ||||| || || | ||||| ||| ||||||||| ||||
Sbjct 723 AAAACCCTAACGGGTAAAACCATAACCCTAGAAGTCGAATCCTCTGACACAATCGACAAT 782
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||||| || ||| ||||| |||||||| || || ||| ||| | || |||||
Sbjct 783 GTGAAAGCCAA-GATCCAAGACAAAGAAGGCATCCCACCCGACCAACAACGCCTCATCTT 841
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||||||||| ||| | |||||||| | ||||| ||||| |||||| ||||||| |||||
Sbjct 842 CGCCGGAAAACAGCTCGAAGATGGCCGCACTTTAGCCGACTACAACATCCAGAAGGAGTC 901
Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390
|| |||||||||||| | | |||||
Sbjct 902 AACCCTTCACCTTGTTCTTCGCCTTCG 928
Score = 102 bits (112), Expect = 2e-16
Identities = 85/104 (82%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||| | | |||||||||||| || ||||| ||||||| || ||||| || |||||
Sbjct 928 CGAAGGCGAAGAACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCTAAAGTG 869
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
| |||||||| ||||| |||||||||||||| || ||||||||
Sbjct 868 CGGCCATCTTCGAGCTGTTTTCCGGCGAAGATGAGGCGTTGTTG 825
>seq6
Length=1196388
Score = 127 bits (140), Expect = 5e-24
Identities = 149/200 (75%), Gaps = 1/200 (1%)
Strand=Plus/Minus
Query 206180 TTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTC 206238
|||| ||| || | ||||||||||| || || ||||| || ||||| |||||||| |||
Sbjct 29921 TTTGTAAAGACTTTGACAGGAAAAACAATTACCTTGGAGGTTGAAAGCTCTGACACTGTC 29862
Query 206239 GAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTT 206298
|| || ||| |||||||| || ||||||||||| ||||| || || |
Sbjct 29861 GACAATGTTAAGACCAAGATTCAGGACAAAGAAGGAATCCCCCCGGATCAGCAGAGGTTG 29802
Query 206299 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 206358
||||| || || |||||| | || |||||| | ||| | || ||||||||| |||||||
Sbjct 29801 ATCTTTGCTGGGAAGCAGCTCGAGGATGGACGTACTCTTGCTGATTACAACATCCAGAAG 29742
Query 206359 GAGTCTACTCTTCACCTTGT 206378
||||| || || || |||||
Sbjct 29741 GAGTCAACCCTCCATCTTGT 29722
Score = 116 bits (128), Expect = 9e-21
Identities = 136/181 (75%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252
||||| || || ||||||||||| || || || |||||||| | || || |||||
Sbjct 28994 ACAGGGAAGACCATCACTTTGGAGGTTGAGAGCTCTGACACTATTGATAATGTCAAAGC- 28936
Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312
|||||||| || || ||||| ||| |||||| ||||| | ||||| ||||| ||
Sbjct 28935 CAAGATTCAGGACAAGGAAGGCATTCCTCCGGACCAGCAAAGGTTGATCTTTGCCGGGAA 28876
Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372
|||| | || ||||| ||||| | || |||||||| |||| || |||||||| |||||
Sbjct 28875 GCAGCTTGATGATGGGAGGACCCTTGCGGATTACAATATCCAAAAGGAGTCTACCCTTCA 28816
Query 206373 C 206373
|
Sbjct 28815 C 28815
Score = 111 bits (122), Expect = 4e-19
Identities = 136/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
||||| || || ||||||||||| || || || || ||||| | || || |||
Sbjct 29678 ACAGGGAAGACCATCACTTTGGAGGTTGAGAGCTCAGACACTATTGACAATGTTAAGACT 29619
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
|||||||| || ||||| |||||| ||||| || || | ||||| || || |||
Sbjct 29618 AAGATTCAGGACAAAGAGGGAATTCCCCCGGATCAGCAGAGGTTGATCTTTGCTGGGAAG 29559
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | || |||||| | ||| | || ||||||||| ||||||| ||||| || || ||
Sbjct 29558 CAGCTCGAGGATGGACGTACTCTTGCTGATTACAACATCCAGAAGGAGTCAACCCTCCAT 29499
Query 206374 CTTGTT 206379
||||||
Sbjct 29498 CTTGTT 29493
Score = 96.9 bits (106), Expect = 8e-15
Identities = 142/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | ||||| || || ||||||||||| || || || || |||
Sbjct 28787 CAGATTTTTGTTAAGACCTTGACAGGGAAGACCATCACTTTGGAGGTTGAGAGCTCAGAC 28728
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || |||||| ||||| || || || || || ||| || || ||
Sbjct 28727 ACTATTGATAATGTAAAGACTAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCAGCAG 28668
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | || |||||||| |||||| | || ||||| ||||| | || |||||||| ||
Sbjct 28667 AGGTTGATTTTCGCCGGGAAGCAGCTTGAGGATGGGAGGACCCTTGCAGATTACAATATC 28608
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
|| || |||||||| ||||||
Sbjct 28607 CAAAAGGAGTCTACCCTTCAC 28587
Score = 84.2 bits (92), Expect = 5e-11
Identities = 137/196 (70%), Gaps = 1/196 (1%)
Strand=Plus/Minus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| |||||| || || || || | || ||| | || || || |||||||| || |
Sbjct 30150 TTTTGTCAAAACCCTAACTGGCAAGTCCATAACTCTTGAGGTCGAGAGTTCTGATACGAT 30091
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
|| || ||| || |||||||| |||||||||||| || || || | ||
Sbjct 30090 TGATAATGTGAAGACCAAAATTCAAGATAAAGAAGGAATTCCCCCAGATCAGCAGCGTCT 30031
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
||||| || || || ||| | || ||||| | || | || || || ||| |||||||
Sbjct 30030 GATCTTTGCTGGTAAACAGCTCGAGGATGGCCGAACCCTTGCAGACTATAACATCCAGAA 29971
Query 206358 AGAGTCTACTCTTCAC 206373
||||||||||| |||
Sbjct 29970 GGAGTCTACTCTCCAC 29955
>seq355
Length=215899
Score = 125 bits (138), Expect = 2e-23
Identities = 154/208 (74%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || ||||| || || || ||||| | ||||| || |||||||||
Sbjct 204387 CAGATTTTTGTTAAGACCCTCACCGGGAAGACTATCACCCTTGAAGTTGAGAGTTCTGAC 204446
Query 206233 ACAGTCGA-ATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | || | | ||| ||||| |||||||| || ||||| ||| || ||| ||
Sbjct 204447 ACTATTGATAACGTCAAAACAAAA-ATTCAAGACAAGGAAGGTATTCCCCCAGACCAGCA 204505
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|| | ||||| |||||||||||| | |||||||| | || | || ||||||||| |
Sbjct 204506 GAGGTTGATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACCCTTGCTGATTACAACAT 204565
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTT 206379
|||||| ||||| || || |||||||||
Sbjct 204566 CCAGAAGGAGTCGACACTCCACCTTGTT 204593
Score = 111 bits (122), Expect = 4e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| |||||| ||||| | || || ||||| ||||| ||||| || || || || ||
Sbjct 205299 CAAATATTTGTTAAAACCTTGACTGGGAAAACCATCACCTTGGAGGTTGAGAGCTCAGAT 205358
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || ||||||||| || ||| ||
Sbjct 205359 ACTATCGATAATGTCAAGACTAAGATACAGGACAAGGAAGGAATTCCACCAGACCAGCAG 205418
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | || || || || ||||||||||| ||||| | |||||||| || |||||| |
Sbjct 205419 AGGTTGATTTTTGCTGGTAAGCAGTTGGAGGATGGGCGCACTTTGGCAGACTACAACATT 205478
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| || || || |||||||||||
Sbjct 205479 CAGAAGGAATCCACCCTTCACCTTGT 205504
Score = 109 bits (120), Expect = 1e-18
Identities = 141/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || |||||||| || ||| | || || || |||| |||||| ||||
Sbjct 204171 AAGACTCTTACCGGAAAAACCATAACTCTCGAGGTTGAGAGTTTTGACACCATCGACAAT 204230
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||||||||| || || |||||| || ||| || | || |||||
Sbjct 204231 GTTAAGACGAAGATTCAAGATAAGGAGGGAATTCCCCCAGACCAGCAGCGTCTGATCTTT 204290
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| ||||||||| |||| ||||| || || | || || ||||| | |||||||| ||
Sbjct 204291 GCTGGAAAGCAGCTGGAGGATGGCAGAACGCTCGCTGACTACAATATTCAGAAAGAATCG 204350
Query 206365 ACTCTTCACCTTGTT 206379
|| || |||||||||
Sbjct 204351 ACCCTCCACCTTGTT 204365
Score = 105 bits (116), Expect = 2e-17
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| ||||| ||| || | || || || |||||||||||||| || || ||||| |||
Sbjct 205071 CAAATATTCGTCAAGACTTTGACTGGGAAGACGATCACTTTGGAGGTCGAGAGTTCAGAC 205130
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||||||||| || || || ||| || || |||
Sbjct 205131 ACCATTGACAATGTCAAGGCAAAGATTCAAGATAAGGAGGGCATTCCCCCAGATCAGCAA 205190
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | ||||| || || |||||| | || ||||| ||||| | || || ||||| ||
Sbjct 205191 AGGTTAATCTTTGCAGGGAAGCAGCTCGAGGATGGGAGGACCCTTGCTGACTACAATATC 205250
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
|| || |||||||| ||||||
Sbjct 205251 CAAAAGGAGTCTACACTTCAC 205271
>seq1427
Length=108667
Score = 114 bits (126), Expect = 3e-20
Identities = 151/207 (73%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || ||||| || || | || || ||| || || || ||||
Sbjct 17616 AAAACCCTAACGGGTAAAACCATAACCCTAGAGGTCGAATCCTCCGATACCATCGACAAT 17675
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||||| || ||| || || |||||||| || || ||| ||| | || |||||
Sbjct 17676 GTCAAAGCCAA-GATCCAGGACAAAGAAGGCATCCCACCAGACCAACAACGTCTCATCTT 17734
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||||||||| ||| | |||||||| | ||||| ||||| |||||| ||||||| |||||
Sbjct 17735 CGCCGGAAAACAGCTCGAAGATGGCCGCACTTTAGCCGACTACAACATCCAGAAGGAGTC 17794
Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390
|| |||||||||||| | | |||||
Sbjct 17795 CACCCTTCACCTTGTTCTTCGTCTTCG 17821
Score = 102 bits (112), Expect = 2e-16
Identities = 85/104 (82%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||| | | |||||||||||| || ||||| ||||||| || ||||| || |||||
Sbjct 17821 CGAAGACGAAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTAAAGTG 17762
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
| |||||||| ||||| |||||||||||||| || ||||||||
Sbjct 17761 CGGCCATCTTCGAGCTGTTTTCCGGCGAAGATGAGACGTTGTTG 17718
>seq1360
Length=99280
Score = 102 bits (112), Expect = 2e-16
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|||||||| ||||| || || || ||||| || || | || || ||| || |||
Sbjct 35313 CAGATATTCGTGAAAACCCTAACCGGGAAAACCATAACCCTAGAGGTTGAATCCTCAGAC 35254
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| ||||| || ||||| ||| || ||| ||
Sbjct 35253 ACGATCGACAATGTGAAGACTAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAGCAG 35194
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || || ||||||||||| ||| | ||||| || |||| | ||||| |||||| ||
Sbjct 35193 CGTCTGATATTCGCCGGAAAACAGCTCGAAGACGGCCGGACACTCGCCGACTACAACATC 35134
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || |||||||| ||
Sbjct 35133 CAGAAGGAGTCGACCCTTCACCTGGT 35108
>seq843
Length=130910
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || ||||| || || | ||||| ||| || |||||| ||||
Sbjct 120145 AAAACCCTAACTGGGAAAACCATAACCCTAGAAGTCGAATCATCGGACACAATCGACAAT 120204
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| || ||||| ||||| |||||||| || || || ||| | | |||||
Sbjct 120205 GTCAAAACCAAGATCCAAGACAAAGAAGGCATCCCACCAGATCAACAACGCTTAATCTTT 120264
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || || || |||||||||||||| || | || ||||||||| | ||||| || ||
Sbjct 120265 GCTGGGAAACAATTGGAAGATGGAAGAACACTTGCAGATTACAACATTCAGAAGGAATCG 120324
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|| ||||| || || | |||||||
Sbjct 120325 ACGCTTCATCTGGTGCTTCGACTTCG 120350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181651238999358
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |