Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq319 84.2 2e-11
>seq319
Length=213347
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| ||||| |||| ||||| | ||||| ||||||||||| | |
Sbjct 180314 ATGCAGATCTTTGTCAAAACCCTAACAGGAAAGACAATCACCCTCGAAGTCGAAAGCTCC 180373
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || || || | || || |||||| || || || || || || || || |||
Sbjct 180374 GACACCATTGACAACGTCAAGGCCAAAATTCAAGACAAGGAAGGAATCCCCCCAGACCAG 180433
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
||||| ||||| | | ||| || || ||||| |||| ||| || ||| |||||
Sbjct 180434 CAAAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGAACCCTCGCCGACTACAAC 180493
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403
|| || || || ||||| |||| | ||| | | | || |||||||
Sbjct 180494 ATCCAGAAGGAGTCCACTCTTCACCTTGTGCTCCGTCTTAGGGGAGGAA 180542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445032097911360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |