Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18] 11,198 sequences; 536,949,264 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq319 84.2 2e-11 >seq319 Length=213347 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| ||||| |||| ||||| | ||||| ||||||||||| | | Sbjct 180314 ATGCAGATCTTTGTCAAAACCCTAACAGGAAAGACAATCACCCTCGAAGTCGAAAGCTCC 180373 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || || |||||| || || || || || || || || ||| Sbjct 180374 GACACCATTGACAACGTCAAGGCCAAAATTCAAGACAAGGAAGGAATCCCCCCAGACCAG 180433 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||||| ||||| | | ||| || || ||||| |||| ||| || ||| ||||| Sbjct 180434 CAAAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGAACCCTCGCCGACTACAAC 180493 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 || || || || ||||| |||| | ||| | | | || ||||||| Sbjct 180494 ATCCAGAAGGAGTCCACTCTTCACCTTGTGCTCCGTCTTAGGGGAGGAA 180542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445032097911360