Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18] 11,198 sequences; 536,949,264 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq20 91.5 2e-12 >seq20 Length=765589 Score = 91.5 bits (100), Expect = 2e-12 Identities = 152/212 (72%), Gaps = 7/212 (3%) Strand=Plus/Plus Query 1456532 GAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGGC 1456591 || || ||||| |||||| |||||| || | ||| |||| |||||| ||| | || Sbjct 522233 GATGCAGTCGAAATCGAGCGAGAGTTCGTAACCGATGCGCTTCCGGTGAAGCTGGTTGGG 522292 Query 1456592 ATGAAC-GCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCG 1456650 |||||| | | ||| ||| ||||||||||||| ||| || || ||| | ||| | || Sbjct 522293 ATGAACTGTGA--GCTGATGAGCCAGTACATTGAGTTT-GTTGCAGACAGGCTGTTGGCT 522349 Query 1456651 GCGCTCGGCTGCGGAGAAGCACTACCGGACGGCC-AACCCGTTCCCATGGATGGAGTTGA 1456709 || || || || | | ||| ||| ||| | ||||||||| ||||||||||||| Sbjct 522350 GCACTTGGGTGTGAA-AAGGTTTAC-GGAGTTCAGAACCCGTTCGATTGGATGGAGTTGA 522407 Query 1456710 TCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 |||| || | || ||||| || || || ||| Sbjct 522408 TCTCTCTTCAAGGGAAGACTAATTTCTTTGAG 522439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176731132318076