Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq20 91.5 2e-12
>seq20
Length=765589
Score = 91.5 bits (100), Expect = 2e-12
Identities = 152/212 (72%), Gaps = 7/212 (3%)
Strand=Plus/Plus
Query 1456532 GAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGGC 1456591
|| || ||||| |||||| |||||| || | ||| |||| |||||| ||| | ||
Sbjct 522233 GATGCAGTCGAAATCGAGCGAGAGTTCGTAACCGATGCGCTTCCGGTGAAGCTGGTTGGG 522292
Query 1456592 ATGAAC-GCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCG 1456650
|||||| | | ||| ||| ||||||||||||| ||| || || ||| | ||| | ||
Sbjct 522293 ATGAACTGTGA--GCTGATGAGCCAGTACATTGAGTTT-GTTGCAGACAGGCTGTTGGCT 522349
Query 1456651 GCGCTCGGCTGCGGAGAAGCACTACCGGACGGCC-AACCCGTTCCCATGGATGGAGTTGA 1456709
|| || || || | | ||| ||| ||| | ||||||||| |||||||||||||
Sbjct 522350 GCACTTGGGTGTGAA-AAGGTTTAC-GGAGTTCAGAACCCGTTCGATTGGATGGAGTTGA 522407
Query 1456710 TCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741
|||| || | || ||||| || || || |||
Sbjct 522408 TCTCTCTTCAAGGGAAGACTAATTTCTTTGAG 522439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7176731132318076
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |