Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_026924.1
Length=174885
Score E
Sequences producing significant alignments: (Bits) Value
seq220 118 1e-21
seq814 102 9e-17
>seq220
Length=268034
Score = 118 bits (130), Expect = 1e-21
Identities = 162/225 (72%), Gaps = 1/225 (0%)
Strand=Plus/Plus
Query 161125 GTACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGG 161184
|||| | || ||||| || ||||||| ||| ||||| | || |||||| | |||||
Sbjct 141962 GTACGTGTTGGATGCTGCTGAAGAGGTAGGGATTGATTTGCCTTACTCTTGTAGGGCTGG 142021
Query 161185 TGCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTC 161244
| ||||| || || || ||||| ||| || ||||| | ||||||||||| || ||
Sbjct 142022 CTCGTGCTCCTCATGCGCCGGTAAGCTTACGTCTGGTACTCTTGACCAGTCTGATCAATC 142081
Query 161245 CTTCTTGGATGATGACCAGATTGAATCTGGATTCCTTTTGACATGTGTTGCATATCCTAC 161304
|||||| |||||||||||||||| |||||| || | || |||| ||| || |||
Sbjct 142082 CTTCTTAGATGATGACCAGATTGCTGCTGGATGGGTTCTTACTTGTGCTGCTTACCCTGT 142141
Query 161305 TAGCGATTGTGTGATTCAAACTGAGCAAGAGGAGAATCTGTACTG 161349
||| ||| | ||| | ||| | | |||||| | || |||||
Sbjct 142142 TAGTGATGTTACCATTGAGACTCACAAGGAGGAGGAGCT-TACTG 142185
>seq814
Length=133700
Score = 102 bits (112), Expect = 9e-17
Identities = 92/116 (79%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 160653 ATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCATTCAACAAC 160712
||||| || || |||||||| |||||| | |||||||| |||||||| |||||||||
Sbjct 56304 ATCGTAGCTGCTCATGGTTATTTCGGTTGATTGATCTTTCAATATGCTAGTTTCAACAAC 56245
Query 160713 TCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTAGTCGGAATCTGGTTCAC 160768
|| |||| | ||||||||| | || || ||||||||||| || || ||||| ||
Sbjct 56244 TCTTGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTTAC 56189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 559425683427600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |