Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18] 11,198 sequences; 536,949,264 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq71 107 2e-18 >seq71 Length=458239 Score = 107 bits (118), Expect = 2e-18 Identities = 161/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 177390 TACATCCTCGACGCCGCTGAAGAAGCAGGTGTTGATATTAATTACTCATGCCGCGCTGGT 177449 ||||||||||| || || ||||| || || ||||| | |||||||||| | || ||| Sbjct 141198 TACATCCTCGATGCAGCGGAAGAGGCTGGGGTTGACTTGCCTTACTCATGCAGGGCAGGT 141139 Query 177450 GCTTGTTCATCCTGTGCTGGTAAACTTGAGAGTGGTAGTGTAGATCAAAGCGATCAATCG 177509 || || ||| ||||||||||| | || | ||||| | || ||||| |||| ||| Sbjct 141138 GCCTGCTCAACCTGTGCTGGTCAGCTCGTAAGTGGAACAGTTGATCAGTCCGATGGATCC 141079 Query 177510 TTCTTGGATGACGATCAAATGGAGTCAGGATTTATTCTGACCTGTGTGTCATATCCCACC 177569 ||| | || ||| |||||||||| ||| | | | || || ||||| || || ||| | Sbjct 141078 TTCCTTGACGACAATCAAATGGACAAAGGTTATTTGCTCACGTGTGTTTCTTA-CCCGCG 141020 Query 177570 AGC-GATTGTGTAGTCTTGACCGATCAGGAAGAGAGTCTTTACTGA 177614 | | || |||||| || ||| | |||| | |||||||||| Sbjct 141019 ATCAGACTGTGTAATCCATACCCACAAGGAGGGCGATCTTTACTGA 140974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610244169114240