Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq843 138 1e-27
seq1360 134 1e-26
seq355 131 1e-25
seq2834 113 4e-20
seq1427 113 4e-20
seq338 111 1e-19
seq319 109 5e-19
seq51 109 5e-19
seq6 109 5e-19
>seq843
Length=130910
Score = 138 bits (152), Expect = 1e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || || | || || || ||||| ||| | ||
Sbjct 120130 ATGCAGATTTTCGTGAAAACCCTAACTGGGAAAACCATAACCCTAGAAGTCGAATCATCG 120189
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | |||||| || || ||||||||||||||||| ||||| ||||||
Sbjct 120190 GACACAATCGACAATGTCAAAACCAAGATCCAAGACAAAGAAGGCATCCCACCAGATCAA 120249
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| || ||||| | || || |||||||||||||| | || || | |||||||||
Sbjct 120250 CAACGCTTAATCTTTGCTGGGAAACAATTGGAAGATGGAAGAACACTTGCAGATTACAAC 120309
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196
||||| ||||| ||||| | ||| ||||
Sbjct 120310 ATTCAGAAGGAATCGACGCTTCATCTGGT 120338
>seq1360
Length=99280
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| || ||||| || ||||| || | || || || || || ||| | ||
Sbjct 35316 ATGCAGATATTCGTGAAAACCCTAACCGGGAAAACCATAACCCTAGAGGTTGAATCCTCA 35257
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | || || || || |||||||| |||||||| || || || ||
Sbjct 35256 GACACGATCGACAATGTGAAGACTAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 35197
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | |||| |||||| ||||| | |||||| | ||| | |||| ||||||
Sbjct 35196 CAGCGTCTGATATTCGCCGGAAAACAGCTCGAAGACGGCCGGACACTCGCCGACTACAAC 35137
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||||||| | || |||| | ||| || |||||||
Sbjct 35136 ATCCAGAAGGAGTCGACCCTTCACCTGGTGCTTCGTCTGAGGGGTGG 35090
>seq355
Length=215899
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || || ||||| ||| |||| || |||||||| || ||
Sbjct 204384 ATGCAGATTTTTGTTAAGACCCTCACCGGGAAGACTATCACCCTTGAAGTTGAGAGTTCT 204443
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| ||||||||||||||| ||||| || || || || ||
Sbjct 204444 GACACTATTGATAACGTCAAAACAAAAATTCAAGACAAGGAAGGTATTCCCCCAGACCAG 204503
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||||| || || | ||||| | ||| || | |||||||||
Sbjct 204504 CAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACCCTTGCTGATTACAAC 204563
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||||||||| | || | ||| | ||| | | ||||||||
Sbjct 204564 ATCCAGAAGGAGTCGACACTCCACCTTGTTCTCCGTCTAAGAGGTGGCAT 204613
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| |||||||| || || || || ||| |||| || ||||| || ||| ||
Sbjct 204611 CATGCAGATCTTTGTAAAGACCCTCACTGGGAAGACTATCACCCTTGAGGTTGAAAGCTC 204670
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||| | || ||| ||||| |||||||| ||||| || || || || ||
Sbjct 204671 TGACACTATTGATAATGTTAAAACCAAAATCCAAGACAAGGAAGGTATTCCCCCAGACCA 204730
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | ||||| ||||| | || || | || || | ||||||||
Sbjct 204731 GCAGAGGTTGATCTTTGCCGGAAAACAGCTTGAGGATGGCCGCACTCTTGCTGATTACAA 204790
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| ||| | || ||||| | ||| | | ||||||||
Sbjct 204791 CATCCAGAAGGAGTCAACCCTCCACCTGGTTCTCCGTCTAAGAGGTGGCAT 204841
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || || || ||||| ||| | || || ||||| || ||| ||
Sbjct 204839 CATGCAGATCTTTGTGAAGACCCTCACCGGGAAGACAATCACCCTTGAGGTTGAAAGCTC 204898
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||| | |||||| ||||||||||| || |||||||| || || || ||
Sbjct 204899 CGACACCATTGACAATGTCAAAACCAAAATTCAAGATAAGGAAGGCATTCCCCCTGACCA 204958
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||| | | || | || || || || | || || | ||| || | |||||||
Sbjct 204959 ACAGAGACTGATCTTTGCTGGAAAGCAGCTTGAGGATGGGCGCACCCTTGCTGATTACAC 205018
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| |||||||| || | ||| | || | ||||| | ||||| ||
Sbjct 205019 CATTCAGAAGGAGTCAACGCTCCATCTTGTACTCCGTTTAAGAGGTGGAAT 205069
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| ||||| || || ||| |||| || ||| | || ||| | || || || ||
Sbjct 205068 ATGCAAATATTCGTCAAGACTTTGACTGGGAAGACGATCACTTTGGAGGTCGAGAGTTCA 205127
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| ||| |||||||| || || ||||| || || |||||
Sbjct 205128 GACACCATTGACAATGTCAAGGCAAAGATTCAAGATAAGGAGGGCATTCCCCCAGATCAG 205187
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | ||||| | || || || || | || || | |||| || | || |||||
Sbjct 205188 CAAAGGTTAATCTTTGCAGGGAAGCAGCTCGAGGATGGGAGGACCCTTGCTGACTACAAT 205247
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTT 27205
|| ||||||||||| || | || ||||| | |||||
Sbjct 205248 ATCCAAAAGGAGTCTACACTTCACTTGGTGCTTCGTTT 205285
>seq2834
Length=64598
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || || | || || || ||||| ||| | ||
Sbjct 708 ATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAAGTCGAATCCTCT 767
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| || || ||||||||||||||||| |||||||| |||
Sbjct 768 GACACAATCGACAATGTGAAAGCCAAGATCCAAGACAAAGAAGGCATCCCACCCGACCAA 827
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| || | || | |||||| ||||| | ||||| | || | |||| ||||||
Sbjct 828 CAACGCCTCATCTTCGCCGGAAAACAGCTCGAAGATGGCCGCACTTTAGCCGACTACAAC 887
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||| ||| | || | ||| | || | || |||||
Sbjct 888 ATCCAGAAGGAGTCAACCCTTCACCTTGTTCTTCGCCTTCGTGGTGG 934
>seq1427
Length=108667
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || || | || || || || || ||| | |||
Sbjct 17601 ATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTCGAATCCTCC 17660
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | |||||| || || || |||||||||||||| ||||| || |||
Sbjct 17661 GATACCATCGACAATGTCAAAGCCAAGATCCAGGACAAAGAAGGCATCCCACCAGACCAA 17720
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | |||||| ||||| | ||||| | || | |||| ||||||
Sbjct 17721 CAACGTCTCATCTTCGCCGGAAAACAGCTCGAAGATGGCCGCACTTTAGCCGACTACAAC 17780
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||| ||| | || | ||| | ||| | || |||||
Sbjct 17781 ATCCAGAAGGAGTCCACCCTTCACCTTGTTCTTCGTCTTCGTGGTGG 17827
>seq338
Length=211836
Score = 111 bits (122), Expect = 1e-19
Identities = 140/191 (73%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| |||||||| |||||||| || || || | || || ||||| || ||| |
Sbjct 171488 ATGCAAATATTTGTGAAAACTCTTACGGGTAAAACCATCACCCTTGAGGTTGAATCTAGT 171429
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || | | ||||| |||||||| |||||||||||||| | ||||||||||
Sbjct 171428 GACACCATCAACAATGTCAAGGCTAAAATTCATGACAAAGAAGGCATTCAACCCGATCAA 171369
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | |||||| || ||| | ||||||| || | |||||||||||
Sbjct 171368 CAGCGCCTCATCTTCGCCGGAAAGCAACTTGAAGACAACCGTACTCTAGCCGATTACAAC 171309
Query 27168 ATTCA-AAAGG 27177
|| || |||||
Sbjct 171308 ATCCAGAAAGG 171298
>seq319
Length=213347
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || ||||| || || ||| | ||||| |||||||| || |||
Sbjct 180542 ATGCAAATCTTTGTGAAGACTCTCACAGGGAAGACCATTACCCTTGAAGTCGAGAGCTCC 180601
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | ||||| || ||||||||||| || || || || || || ||
Sbjct 180602 GATACCATTGACAATGTCAAGGCTAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAG 180661
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | |||||| || || | || || | || || |||| ||||||
Sbjct 180662 CAGAGGTTGATCTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACTCTTGCCGACTACAAC 180721
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| ||| | || ||||| | ||| | || ||||| ||
Sbjct 180722 ATCCAGAAGGAGTCTACCCTTCACTTGGTGCTCCGTCTTCGTGGTGGTAT 180771
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| ||||| || || || ||| | || || || ||||| ||| |||
Sbjct 180314 ATGCAGATCTTTGTCAAAACCCTAACAGGAAAGACAATCACCCTCGAAGTCGAAAGCTCC 180373
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| |||||||||||||| ||||| || || || || ||
Sbjct 180374 GACACCATTGACAACGTCAAGGCCAAAATTCAAGACAAGGAAGGAATCCCCCCAGACCAG 180433
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | ||||| || || | || || | ||| | |||| ||||||
Sbjct 180434 CAAAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGAACCCTCGCCGACTACAAC 180493
Query 27168 ATTCAAAAGGAGTCGAC 27184
|| || |||||||| ||
Sbjct 180494 ATCCAGAAGGAGTCCAC 180510
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| || || ||||| || || ||| | |||||| | || || || |||
Sbjct 180770 ATGCAGATATTCGTCAAGACTCTTACTGGGAAGACCATTACTTTGGAGGTTGAGAGCTCC 180829
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || ||||| ||||| ||||| || || || || ||
Sbjct 180830 GACACCATTGACAATGTTAAGACCAAGATTCAGGACAAGGAAGGTATCCCCCCAGACCAG 180889
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||| || || || | || || | || | | || ||||||
Sbjct 180890 CAGAGGTTGATTTTCGCTGGTAAGCAGCTCGAGGATGGCCGTACTTTGGCTGACTACAAC 180949
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| || | |||||||| | |||||| |||| || ||
Sbjct 180950 ATCCAGAAGGAGTCCACTCTCCATTTGGTGCTCCGTTTGAGGGGAGGAAT 180999
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/221 (69%), Gaps = 3/221 (1%)
Strand=Plus/Plus
Query 26964 AATAAATTTTTTAATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCT 27023
||| ||||||| | | |||| ||||| || || || || || || || || ||| |
Sbjct 180065 AATTAATTTTTGATTATATAG---ATGCAAATCTTCGTTAAGACCCTTACTGGAAAGACC 180121
Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083
|| ||||| || || || |||||| | ||||| | ||||| || || ||||||
Sbjct 180122 ATCACTCTCGAGGTCGAGAGTTCCGACACCATTGACAATGTCAAGACTAAGATCCAAGAC 180181
Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143
|| ||||| || || || || || || | | || | |||||| ||||| | || |||
Sbjct 180182 AAGGAAGGGATTCCCCCAGACCAGCAAAGGCTGATCTTCGCCGGAAAACAGCTAGAGGAC 180241
Query 27144 AGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGAC 27184
| ||| | | || |||||||||||||||||||| ||
Sbjct 180242 GGCCGAACCCTAGCTGACTACAACATTCAAAAGGAGTCAAC 180282
>seq51
Length=574565
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| ||||| ||||| |||||| | || || || || ||||| | ||
Sbjct 463483 ATGCAAATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGACTTCT 463542
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| ||||| |||||||| || || || || || ||||| || ||
Sbjct 463543 GACACTATTGAGAATGTCAAGACCAAAATTCAGGATAAGGAGGGTATCCCACCGGACCAG 463602
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||| || || || ||||| || | || | | || ||||||
Sbjct 463603 CAGAGGCTCATCTTCGCTGGTAAGCAGTTGGATGATGGCAGAACTCTAGCTGACTACAAC 463662
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| || | || || || | ||| || ||||||| ||
Sbjct 463663 ATCCAAAAGGAGTCCACTCTCCACTTAGTCCTCCGTCTGAGGGGTGGTAT 463712
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || || ||||| ||| |||| || || || || || | ||
Sbjct 464395 ATGCAGATCTTTGTGAAGACCCTCACCGGGAAGACTATCACCCTCGAGGTTGAGACTTCT 464454
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||||| || || || ||||| ||||| || || || || || || ||
Sbjct 464455 GATACAATTGAGAATGTGAAGACTAAGATTCAGGACAAGGAGGGTATCCCCCCAGACCAG 464514
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || || |||||||| || || ||| | | |||||||||
Sbjct 464515 CAGAGGCTCATCTTTGCTGGGAAGCAATTGGAGGATGGTCGAACCTTGGCTGATTACAAC 464574
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|||||||||||||| ||| | ||| | ||| | ||| | || || ||
Sbjct 464575 ATTCAAAAGGAGTCTACCCTCCATCTTGTTCTCCGTCTTCGTGGGGG 464621
>seq6
Length=1196388
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| ||||| || || |||||||| || |||||||| || || ||
Sbjct 30158 ATGCAAATTTTTGTCAAAACCCTAACTGGCAAGTCCATAACTCTTGAGGTCGAGAGTTCT 30099
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| ||||||| | || || ||||||||||| |||||||| || || || |||||
Sbjct 30098 GATACGATTGATAATGTGAAGACCAAAATTCAAGATAAAGAAGGAATTCCCCCAGATCAG 30039
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | || || ||||| | || || | ||| || | || || |||
Sbjct 30038 CAGCGTCTGATCTTTGCTGGTAAACAGCTCGAGGATGGCCGAACCCTTGCAGACTATAAC 29979
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| || | || ||||| | || | || ||||| ||
Sbjct 29978 ATCCAGAAGGAGTCTACTCTCCACTTGGTGCTTCGCCTTCGTGGTGGAAT 29929
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || ||| |||| || ||| | || ||| | || || || ||
Sbjct 29018 ATGCAAATTTTTGTTAAGACTTTGACAGGGAAGACCATCACTTTGGAGGTTGAGAGCTCT 28959
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| || ||||| ||||| |||||||| || || || ||
Sbjct 28958 GACACTATTGATAATGTCAAAGCCAAGATTCAGGACAAGGAAGGCATTCCTCCGGACCAG 28899
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | ||||| || || | || || | |||| || | ||||||||
Sbjct 28898 CAAAGGTTGATCTTTGCCGGGAAGCAGCTTGATGATGGGAGGACCCTTGCGGATTACAAT 28839
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| ||| | || ||||| |||| ||| | || || ||
Sbjct 28838 ATCCAAAAGGAGTCTACCCTTCACTTGGTGCTGCGCTTGAGAGGAGGGAT 28789
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || ||| | || ||| | || || || ||
Sbjct 28790 ATGCAGATTTTTGTTAAGACCTTGACAGGGAAGACCATCACTTTGGAGGTTGAGAGCTCA 28731
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || || || ||||| || ||||| || || |||||
Sbjct 28730 GACACTATTGATAATGTAAAGACTAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCAG 28671
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | |||||| || || | || || | |||| || | ||||||||
Sbjct 28670 CAGAGGTTGATTTTCGCCGGGAAGCAGCTTGAGGATGGGAGGACCCTTGCAGATTACAAT 28611
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| ||| | || ||||| | ||||| | ||||| ||
Sbjct 28610 ATCCAAAAGGAGTCTACCCTTCACTTGGTGCTCCGTTTAAGAGGTGGGAT 28561
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| |||||| | || || ||| |||||||| | || || || |||
Sbjct 29246 ATGCAAATTTTTGTGAAAACTTTAACAGGGAAGACTATTACTTTGGAGGTTGAGAGCTCC 29187
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || |||||||||||||| || || || || || |||||
Sbjct 29186 GACACTATTGACAATGTTAAGACCAAAATTCAAGACAAGGAGGGAATCCCCCCAGATCAG 29127
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || || || || | || || | || || | ||||||||
Sbjct 29126 CAGAGGTTGATCTTTGCTGGGAAGCAGCTCGAGGATGGGCGTACTCTTGCTGATTACAAT 29067
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| ||| | ||| | ||| | || || | ||||| ||
Sbjct 29066 ATCCAGAAGGAGTCAACCCTCCATCTTGTTCTCCGATTAAGAGGTGGAAT 29017
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || ||| |||| || ||| | || ||| | || || || ||
Sbjct 29702 ATGCAAATTTTTGTGAAGACTTTGACAGGGAAGACCATCACTTTGGAGGTTGAGAGCTCA 29643
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || ||||| |||||||| || || || || |||||
Sbjct 29642 GACACTATTGACAATGTTAAGACTAAGATTCAGGACAAAGAGGGAATTCCCCCGGATCAG 29583
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || || || || | || || | || || | |||||||||
Sbjct 29582 CAGAGGTTGATCTTTGCTGGGAAGCAGCTCGAGGATGGACGTACTCTTGCTGATTACAAC 29523
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| ||| | ||| | ||| | || || ||||||| ||
Sbjct 29522 ATCCAGAAGGAGTCAACCCTCCATCTTGTTCTCCGATTAAGGGGTGGTAT 29473
Score = 82.4 bits (90), Expect = 7e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || |||||||| ||| |||| || || | ||||| | || || ||| ||
Sbjct 29930 ATGCAAATCTTTGTAAAGACTTTGACAGGAAAAACAATTACCTTGGAGGTTGAAAGCTCT 29871
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | | || | || || || ||||| ||||||||||| || || || |||||
Sbjct 29870 GACACTGTCGACAATGTTAAGACCAAGATTCAGGACAAAGAAGGAATCCCCCCGGATCAG 29811
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || || || || | || || | || || | |||||||||
Sbjct 29810 CAGAGGTTGATCTTTGCTGGGAAGCAGCTCGAGGATGGACGTACTCTTGCTGATTACAAC 29751
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| ||| | ||| | || | || || ||||||| ||
Sbjct 29750 ATCCAGAAGGAGTCAACCCTCCATCTTGTGCTCCGATTAAGGGGTGGTAT 29701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434857522296960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |