Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18] 11,198 sequences; 536,949,264 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq50 98.7 8e-16 >seq50 Length=553849 Score = 98.7 bits (108), Expect = 8e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 ||||||||||| | ||||| | | ||| || | |||||| ||||| |||| ||| Sbjct 50669 TGAGCAATCATACACGTCAATAGAGCGTAAGACGCAATATTAAAGGGAACCCCCAAGCCC 50728 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 ||||||||||| | |||||||| ||| ||||| ||||| || ||||| ||||| ||||| Sbjct 50729 ATGTCTGCTGACCGCTGGTACATTTGACAAGATAGCTCACCATTTGCTACATAGAACTG 50787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414420234019672