Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18] 11,198 sequences; 536,949,264 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq814 93.3 5e-14 >seq814 Length=133700 Score = 93.3 bits (102), Expect = 5e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 164621 ATCGTTGCCGCTCACGGTTACTTTGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAAC 164680 ||||| || ||||| ||||| || ||| | |||| || ||||| ||| ||||||||| Sbjct 56304 ATCGTAGCTGCTCATGGTTATTTCGGTTGATTGATCTTTCAATATGCTAGTTTCAACAAC 56245 Query 164681 TCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTTAC 164736 || |||| | ||||||||| | || || |||||||| || ||||| |||||||| Sbjct 56244 TCTTGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTTAC 56189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557576342325360