Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq1360 140 2e-28
seq319 131 1e-25
seq355 125 5e-24
seq6 123 2e-23
seq1427 122 6e-23
seq51 105 5e-18
seq2834 95.1 9e-15
seq843 93.3 3e-14
seq338 82.4 5e-11
>seq1360
Length=99280
Score = 140 bits (154), Expect = 2e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || ||||| | | |||||||||||| || |||||| ||||||||||| ||||||
Sbjct 35090 CCACCCCTCAGACGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 35149
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
||| || |||| || ||||| || ||||| || |||| ||||||||| |||| ||
Sbjct 35150 AGTGTCCGGCCGTCTTCGAGCTGTTTTCCGGCGAATATCAGACGCTGCTGGTCTGGGGGA 35209
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| |||||||| || ||||| ||||| | | || ||||| | |||||| |||
Sbjct 35210 ATGCCTTCCTTGTCTTGGATCTTAGTCTTCACATTGTCGATCGTGTCTGAGGATTCAACC 35269
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| | || || || || || || ||||| |||||||| || |||||
Sbjct 35270 TCTAGGGTTATGGTTTTCCCGGTTAGGGTTTTCACGAATATCTGCAT 35316
>seq319
Length=213347
Score = 131 bits (144), Expect = 1e-25
Identities = 170/233 (73%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| || |||| | | ||||| |||||| || |||||| ||||| ||||||||
Sbjct 181228 CATTCCTCCCCTCAAACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATATTGTAATC 181169
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || | | || |||||||||||||||||||| ||||| | |||||| ||||
Sbjct 181168 CGCAAGAGTCCTTCCATCTTCCAGCTGCTTCCCGGCAAAAATCAACCTCTGCTGGTCTGG 181109
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
|| | |||||||| ||| |||||| ||| || ||| | |||||||| | |
Sbjct 181108 GGGGATGCCTTCCTTGTCCTGAATCTTCGCCTTGACATTGT--CAATGGTGTCCGAGCTC 181051
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | || || |||||||| || | |||||| ||||| || |||||
Sbjct 181050 TCAACCTCGAGGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 180998
Score = 129 bits (142), Expect = 4e-25
Identities = 157/212 (74%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| |||||| || |||||| ||||||||||| ||||| || ||| | || ||
Sbjct 180751 CACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCCTC 180692
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||| |||||||| | |||||| |||| || | ||| ||||| ||
Sbjct 180691 AAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTG 180632
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| ||| || ||| | ||||| |||| | || || || | ||||| |||
Sbjct 180631 AATCTTAGCCTTGACATTGT--CAATGGTATCGGAGCTCTCGACTTCAAGGGTAATGGTC 180574
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||| |||||||| |||||||||||
Sbjct 180573 TTCCCTGTGAGAGTCTTCACAAAGATTTGCAT 180542
Score = 122 bits (134), Expect = 6e-23
Identities = 168/233 (72%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| || || || | | ||| |||||||| || ||||||||| |||||||| ||
Sbjct 180316 CATTCCTCCCCTGAGACGGAGCACAAGGTGAAGAGTTGACTCCTTTTGAATGTTGTAGTC 180257
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || || |||| || ||||| || ||||| ||||||| | ||||| ||||
Sbjct 180256 AGCTAGGGTTCGGCCGTCCTCTAGCTGTTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGG 180197
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
|| | |||||||| || ||||| ||| || ||| | ||||||||||
Sbjct 180196 GGGAATCCCTTCCTTGTCTTGGATCTTAGTCTTGACATTGT--CAATGGTGTCGGAACTC 180139
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | || || |||||||| || |||||||| ||||||||||||||
Sbjct 180138 TCGACCTCGAGAGTGATGGTCTTTCCAGTAAGGGTCTTAACGAAGATTTGCAT 180086
Score = 120 bits (132), Expect = 2e-22
Identities = 167/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| || || || | | ||| |||||||| ||| |||||| |||||||||||
Sbjct 180547 TTGCATTCCTCCCCTAAGACGGAGCACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTA 180488
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|||||||| || | || || |||||||| ||||||||||| | | ||||| ||
Sbjct 180487 GTCGGCGAGGGTTCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTTTGCTGGTC 180428
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| || | |||||||| || || || ||| | | | |||||||||| |
Sbjct 180427 TGGGGGGATTCCTTCCTTGTCTTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGCT 180368
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || || | || || |||||||| || ||||| || || ||||| |||||
Sbjct 180367 TTCGACTTCGAGGGTGATTGTCTTTCCTGTTAGGGTTTTGACAAAGATCTGCAT 180314
Score = 118 bits (130), Expect = 8e-22
Identities = 167/233 (72%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| || |||| | | ||||| || || ||| |||||| ||||||||||| ||
Sbjct 181000 CATTCCTCCCCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTC 180941
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| | || | || || |||||||| || || || ||||| | |||||| ||||
Sbjct 180940 AGCCAAAGTACGGCCATCCTCGAGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGG 180881
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
|| | ||||||||| ||| ||||| ||| || ||| | |||||||||| |
Sbjct 180880 GGGGATACCTTCCTTGTCCTGAATCTTGGTCTTAACATTGT--CAATGGTGTCGGAGCTC 180823
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||| ||||| ||||| || || || ||||| ||||| || |||||
Sbjct 180822 TCAACCTCCAAAGTAATGGTCTTCCCAGTAAGAGTCTTGACGAATATCTGCAT 180770
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| || |||||| || ||||||||||| || || ||| | || ||
Sbjct 181434 ACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTACGCCCATCCTCA 181375
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || ||||||||||| | |||||| |||| || | || ||||| |||
Sbjct 181374 AGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATCCCCTCCTTGTCCTGG 181315
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | || ||||| | | || ||||||| || || |||||
Sbjct 181314 ATCTTAGCCTTCACATTATCAATAGTGTCCGAGCTCTCAACCTCCAAAGTGATGGTCTTG 181255
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||||||||| || || |||||
Sbjct 181254 CCAGTCAAGGTCTTCACAAAAATCTGCAT 181226
>seq355
Length=215899
Score = 125 bits (138), Expect = 5e-24
Identities = 169/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || | | |||||||| || || |||||| ||||||||||||||
Sbjct 204842 CATGCCACCTCTTAGACGGAGAACCAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAATC 204783
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || || ||||| || |||||||||||||| | |||||| ||||
Sbjct 204782 AGCAAGAGTGCGGCCATCCTCAAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCTGG 204723
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
|| | ||||||||| || || || | || || || | || ||||| | | ||
Sbjct 204722 GGGAATACCTTCCTTGTCTTGGAT-TTTGGTTTTAACATTATCAATAGTGTCAGAGCTTT 204664
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| ||||| | || || ||||| || ||||||||||| || ||||| ||||||
Sbjct 204663 CAACCTCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTTACAAAGATCTGCATG 204611
Score = 116 bits (128), Expect = 3e-21
Identities = 173/242 (71%), Gaps = 9/242 (4%)
Strand=Plus/Minus
Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160
||||| |||||| ||||| | | | || || || ||||| |||||| || ||| |
Sbjct 205076 TATTTGCATTCCACCTCTTAAACGGAGTACAAGATGGAGCGTTGACTCCTTCTGAATGGT 205017
Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220
|||||| || || |||| | || || |||||||| || |||||||||| | ||| ||
Sbjct 205016 GTAATCAGCAAGGGTGCGCCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTG 204957
Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT----CAATGTTCCTATGGTGT 44276
|| | || | |||||||| || || || || || || ||| | |||||||
Sbjct 204956 GTCAGGGGGAATGCCTTCCTTATC--TTGAATTTTGGTTTTGACATTGT--CAATGGTGT 204901
Query 44277 CGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCA 44336
||| | ||| ||||| | || || ||||| || |||||||||||||| ||||| ||||
Sbjct 204900 CGGAGCTTTCAACCTCAAGGGTGATTGTCTTCCCGGTGAGGGTCTTCACAAAGATCTGCA 204841
Query 44337 TG 44338
||
Sbjct 204840 TG 204839
Score = 116 bits (128), Expect = 3e-21
Identities = 171/239 (72%), Gaps = 5/239 (2%)
Strand=Plus/Minus
Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160
||||| |||||| ||||| | | | ||||| |||||| || |||||||||||| ||
Sbjct 205304 TATTTGCATTCCTCCTCTTAAACGAAGCACCAAGTGAAGTGTAGACTCCTTTTGGATATT 205245
Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220
||| || || || | | | || || ||||||||||| |||||||| || | |||||
Sbjct 205244 GTAGTCAGCAAGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAGATTAACCTTTGCTG 205185
Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCG 44278
||||| || | || ||||| || ||||| ||| || ||| | ||||||||
Sbjct 205184 ATCTGGGGGAATGCCCTCCTTATCTTGAATCTTTGCCTTGACATTGT--CAATGGTGTCT 205127
Query 44279 GCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || ||||||| || |||||||| || || | ||||| ||||| ||||||||
Sbjct 205126 GAACTCTCGACCTCCAAAGTGATCGTCTTCCCAGTCAAAGTCTTGACGAATATTTGCAT 205068
Score = 109 bits (120), Expect = 4e-19
Identities = 165/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || | | || ||||| || || |||||| ||||||||||||||
Sbjct 204614 CATGCCACCTCTTAGACGGAGAACAAGGTGGAGTGTCGACTCCTTCTGGATGTTGTAATC 204555
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || || |||||||| |||||||||||||| | |||||| ||||
Sbjct 204554 AGCAAGGGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGG 204495
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
|| | ||||||||| | | | | || || || | ||| | || ||||| | |
Sbjct 204494 GGGAATACCTTCCTTGT-CTTGAATTTTTGTTTTGACGTTATCAATAGTGTCAGAACTCT 204436
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || | || || ||||| || ||||||||||| || || || |||||
Sbjct 204435 CAACTTCAAGGGTGATAGTCTTCCCGGTGAGGGTCTTAACAAAAATCTGCAT 204384
Score = 95.1 bits (104), Expect = 9e-15
Identities = 162/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| |||||||| || | | || ||||| || || || || || || ||||| ||
Sbjct 204386 CATCCCCCCTCTAAGACGGAGAACAAGGTGGAGGGTCGATTCTTTCTGAATATTGTAGTC 204327
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
||||| | | || ||||||||||| || |||||||||| ||||||||| ||||
Sbjct 204326 AGCGAGCGTTCTGCCATCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCTGG 204267
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
|| | || ||||| || |||||| ||| || ||| | ||||||||
Sbjct 204266 GGGAATTCCCTCCTTATCTTGAATCTTCGTCTTAACATTGT--CGATGGTGTCAAAACTC 204209
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | || || || ||||| || || ||||| || |||||||||||
Sbjct 204208 TCAACCTCGAGAGTTATGGTTTTTCCGGTAAGAGTCTTAACAAAGATTTGCAT 204156
>seq6
Length=1196388
Score = 123 bits (136), Expect = 2e-23
Identities = 168/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||||| | || ||||| |||||| || |||||||||||| ||||||||
Sbjct 28788 CATCCCTCCTCTCAAGCGCAGCACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAATC 28847
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || | | | || || ||||||||||||||||||||||| | ||||| || |
Sbjct 28848 CGCAAGGGTCCTCCCATCATCAAGCTGCTTCCCGGCAAAGATCAACCTTTGCTGGTCCGG 28907
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
||| | |||||||| ||| ||||| |||| | || | || ||||| | | |
Sbjct 28908 AGGAATGCCTTCCTTGTCCTGAATCTT-GGCTTTGACATTATCAATAGTGTCAGAGCTCT 28966
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||||| || || ||||| || || | ||||| || || ||||||||
Sbjct 28967 CAACCTCCAAAGTGATGGTCTTCCCTGTCAAAGTCTTAACAAAAATTTGCAT 29018
Score = 114 bits (126), Expect = 9e-21
Identities = 168/236 (71%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| ||||| | || | || || || || || |||||| ||||| |||||
Sbjct 29013 TTGCATTCCACCTCTTAATCGGAGAACAAGATGGAGGGTTGACTCCTTCTGGATATTGTA 29072
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| || || ||| | || || ||||||||||| ||||||||||| | |||||||||
Sbjct 29073 ATCAGCAAGAGTACGCCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATC 29132
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281
|| || | || ||||| || || || ||| || ||| | || ||||||| |
Sbjct 29133 TGGGGGGATTCCCTCCTTGTCTTGAATTTTGGTCTTAACATTGT--CAATAGTGTCGGAG 29190
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||| ||||| ||||| || || | || ||||| || ||||||||
Sbjct 29191 CTCTCAACCTCCAAAGTAATAGTCTTCCCTGTTAAAGTTTTCACAAAAATTTGCAT 29246
Score = 114 bits (126), Expect = 9e-21
Identities = 168/236 (71%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || || | || | ||| || || || || |||||| |||||||||||
Sbjct 29697 TTGCATACCACCCCTTAATCGGAGCACAAGATGGAGGGTTGACTCCTTCTGGATGTTGTA 29756
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| || || || | || || ||||||||||| ||||||||||| | |||||||||
Sbjct 29757 ATCAGCAAGAGTACGTCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATC 29816
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281
| || | ||||| || ||| ||||| ||| || ||| | | ||||| | |
Sbjct 29817 CGGGGGGATTCCTTCTTTGTCCTGAATCTTGGTCTTAACATTGT--CGACAGTGTCAGAG 29874
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| ||||||| ||||| || ||||| || | ||||| || |||||||||||
Sbjct 29875 CTTTCAACCTCCAAGGTAATTGTTTTTCCTGTCAAAGTCTTTACAAAGATTTGCAT 29930
Score = 105 bits (116), Expect = 5e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| | | | ||||| |||||| || |||||||||||| ||||||||
Sbjct 28560 CATCCCACCTCTTAAACGGAGCACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAATC 28619
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || | | | || || |||||||||||||| || ||||| | ||||||||| |
Sbjct 28620 TGCAAGGGTCCTCCCATCCTCAAGCTGCTTCCCGGCGAAAATCAACCTCTGCTGATCAGG 28679
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | || ||||| | | ||
Sbjct 28680 GGGAATGCCCTCCTTGTCCTGGATCTTAGTCTTTACATTATCAATAGTGTCTGAGCTCTC 28739
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| || || ||||| || || | |||||| || || || |||||
Sbjct 28740 AACCTCCAAAGTGATGGTCTTCCCTGTCAAGGTCTTAACAAAAATCTGCAT 28790
Score = 105 bits (116), Expect = 5e-18
Identities = 166/236 (70%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || || | || | ||| || || || || ||||| ||||| |||||
Sbjct 29241 TTGCATACCTCCCCTTAATCGGAGCACAAGATGGAGGGTTGATTCCTTCTGGATATTGTA 29300
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| || || ||| | || || ||||||||||| ||||||||||| | |||||||||
Sbjct 29301 ATCAGCAAGAGTACGCCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATC 29360
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281
|| || | || ||||| || || || ||| || ||| | || ||||||| |
Sbjct 29361 TGGGGGGATTCCCTCCTTGTCTTGAATTTTGGTCTTAACATTGT--CAATAGTGTCGGAG 29418
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||| || || ||||| || || | |||||||| || ||||||||
Sbjct 29419 CTCTCAACCTCCAAAGTGATGGTCTTCCCTGTCAAAGTCTTCACAAAAATTTGCAT 29474
Score = 102 bits (112), Expect = 6e-17
Identities = 140/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||| |||||||||||||| || || || | || || ||||||||||| |||||
Sbjct 29511 CTCCTTCTGGATGTTGTAATCAGCAAGAGTACGTCCATCCTCGAGCTGCTTCCCAGCAAA 29570
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAAT 44263
|||||| | ||||||||| | || | || || || ||| ||||| ||| || |
Sbjct 29571 GATCAACCTCTGCTGATCCGGGGGAATTCCCTCTTTGTCCTGAATCTTAGTCTTAACATT 29630
Query 44264 GTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323
|| | || ||||| | | || ||||||| || || ||||| || || | ||||||
Sbjct 29631 GT--CAATAGTGTCTGAGCTCTCAACCTCCAAAGTGATGGTCTTCCCTGTCAAAGTCTTC 29688
Query 44324 ACGAAGATTTGCAT 44337
|| || ||||||||
Sbjct 29689 ACAAAAATTTGCAT 29702
>seq1427
Length=108667
Score = 122 bits (134), Expect = 6e-23
Identities = 156/212 (74%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| ||| |||||| ||||||||||| ||||| | ||| | || ||
Sbjct 17809 ACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTAAAGTGCGGCCATCTTCG 17750
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || ||||| ||||| | ||| || || |||| || | ||||| || |||
Sbjct 17749 AGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCTTCTTTGTCCTGG 17690
Query 44249 ATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| |||| || ||| | ||||| |||| |||||| ||||| | || || ||
Sbjct 17689 ATCTT-GGCTTTGACATTGT--CGATGGTATCGGAGGATTCGACCTCTAGGGTTATGGTT 17633
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| ||||||||||| |||||
Sbjct 17632 TTACCCGTTAGGGTTTTCACGAAGATCTGCAT 17601
>seq51
Length=574565
Score = 105 bits (116), Expect = 5e-18
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || |||| | | ||||||||| | || ||||| || || ||||||||
Sbjct 464169 CATACCTCCCCTCAACCGAAGCACCAGGTGCAAAGTAGATTCCTTCTGAATATTGTAATC 464110
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| | | | | || |||| |||||||||||||||||||| | |||||| ||||
Sbjct 464109 AGCCAATGTCCTTCCATCATCCAACTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGG 464050
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | || ||||| ||| ||||| ||| || ||| | || ||||| | | ||
Sbjct 464049 TGGAATTCCCTCCTTGTCCTGAATCTTTGTCTT-AACGTTATCGATAGTGTCAGAGCTTT 463991
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || |||| || || || ||||| ||||| ||||||||||| || |||||
Sbjct 463990 CAACTTCCAGGGTGATGGTTTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 463939
Score = 102 bits (112), Expect = 6e-17
Identities = 140/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCA 44203
||||||||| ||||||||||| || | ||| || | || |||| |||||||| |||
Sbjct 464586 CTCCTTTTGAATGTTGTAATCAGCCAAGGTT--CGACCATCCTCCAATTGCTTCCCAGCA 464529
Query 44204 AAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAAT 44263
||||| | | |||||| |||| || | ||| ||||| ||| ||||| |||||
Sbjct 464528 AAGATGAGCCTCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGAATCTTAGTCTTCACA 464469
Query 44264 GTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323
| | || || || | | || ||||| | || || ||||| || ||||||||||||
Sbjct 464468 TTCTCAATTGTATCAGAAGTCTCAACCTCGAGGGTGATAGTCTTCCCGGTGAGGGTCTTC 464409
Query 44324 ACGAAGATTTGCAT 44337
|| ||||| |||||
Sbjct 464408 ACAAAGATCTGCAT 464395
Score = 95.1 bits (104), Expect = 9e-15
Identities = 163/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | | || | ||| || ||| |||||||||||||||||| ||
Sbjct 463713 CATACCACCCCTCAGACGGAGGACTAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTC 463654
Query 44167 GGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
|| ||||| || | || |||| |||||| || || ||||| | | |||||| ||
Sbjct 463653 AGCTAGAGTTCT-GC-CATCATCCAACTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCC 463596
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284
| || | ||| ||||| ||| || || ||| | | | || ||||| | |
Sbjct 463595 GGTGGGATACCCTCCTTATCCTGAATTTTGGTCTTGACATTCTCAATAGTGTCAGAAGTC 463536
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| | || || ||||| || || ||||| ||||| |||||||||||
Sbjct 463535 TCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATTTGCAT 463483
Score = 95.1 bits (104), Expect = 9e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||| || ||||| || || || || || | || || ||||||||||| |||||
Sbjct 463902 CTCCTTCTGAATGTTATAGTCTGCAAGAGTCCGGCCATCCTCAAGCTGCTTCCCAGCAAA 463843
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
|| | | |||||| || | || | ||||| || ||| |||||| ||||| |
Sbjct 463842 AATAAGCCTCTGCTGGTCCGGTGGGATCCCTTCTTTATCCTGGATCTTCGTCTTCACATT 463783
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| |||||||| | | ||| || |||| || |||||||| || || |||||||| ||
Sbjct 463782 CTCAATGGTGTCAGAAGTTTCGACTTCCAAGGTGATCGTCTTGCCTGTTAGGGTCTTGAC 463723
Query 44326 GAAGATTTGCAT 44337
||||| |||||
Sbjct 463722 AAAGATCTGCAT 463711
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || | | |||| ||| || || ||||||||||||||||||||
Sbjct 464397 CATACCACCTCTGAGGCGGAGGACCAAGTGCAGGGTTGATTCCTTTTGGATGTTGTAATC 464338
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| | | | || |||||||||||||| |||||||| | | |||||| || |
Sbjct 464337 AGCCAAAGTCCTGCCATCCTCCAGCTGCTTCCCAGCAAAGATAATCCTCTGCTGGTCAGG 464278
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| || |||||| ||||| | | || || || | | |||
Sbjct 464277 TGGAATGCCCTCCTTATCTTGAATCTTCGTCTTCACATTGTCAATTGTATCTGAGCTTTC 464218
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | || || || || || || || ||||| ||||| || |||||
Sbjct 464217 AACTTCTAGGGTGATGGTTTTCCCAGTAAGAGTCTTAACGAAAATCTGCAT 464167
>seq2834
Length=64598
Score = 95.1 bits (104), Expect = 9e-15
Identities = 150/212 (71%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| || |||||| ||||||||||| ||||| | ||| | || ||
Sbjct 916 ACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCTAAAGTGCGGCCATCTTCG 857
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || ||||| ||||| | || || || || | || | ||||| || ||
Sbjct 856 AGCTGTTTTCCGGCGAAGATGAGGCGTTGTTGGTCGGGTGGGATGCCTTCTTTGTCTTGG 797
Query 44249 ATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| |||| || ||| | || ||||| | |||||| || || | || || ||
Sbjct 796 ATCTTG-GCTTTCACATTGT--CGATTGTGTCAGAGGATTCGACTTCTAGGGTTATGGTT 740
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| ||||||||||| |||||
Sbjct 739 TTACCCGTTAGGGTTTTCACGAAGATCTGCAT 708
>seq843
Length=130910
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
||||| | |||| | |||||| |||||||| ||||| || ||||||||||| ||
Sbjct 120356 CCCCCACGAAGTCGAAGCACCAGATGAAGCGTCGATTCCTTCTGAATGTTGTAATCTGCA 120297
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
||| | | || |||| || ||||| |||||||| || || || ||||||| ||
Sbjct 120296 AGTGTTCTTCCATCTTCCAATTGTTTCCCAGCAAAGATTAAGCGTTGTTGATCTGGTGGG 120237
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCA 44288
| ||||| || || ||||| || || ||| | || ||||| | ||||| |
Sbjct 120236 ATGCCTTCTTTGTCTTGGATCTTGGTTTTGACATTGT--CGATTGTGTCCGATGATTCGA 120179
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || | || || || || || || ||||| |||||||| || |||||
Sbjct 120178 CTTCTAGGGTTATGGTTTTCCCAGTTAGGGTTTTCACGAAAATCTGCAT 120130
>seq338
Length=211836
Score = 82.4 bits (90), Expect = 5e-11
Identities = 136/193 (70%), Gaps = 5/193 (3%)
Strand=Plus/Plus
Query 44148 CCTTT-TGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
||||| ||||||||||||||||| || || | ||| || || ||||| ||||| |||
Sbjct 171298 CCTTTCTGGATGTTGTAATCGGCTAGAGTACGGTTGTCTTCAAGTTGCTTTCCGGCGAAG 171357
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATG 44264
|| | ||||| ||||| | | | ||||| || || || || ||| || ||
Sbjct 171358 ATGAGGCGCTGTTGATCGGGTTGAATGCCTTCTTTGTCATGAATTTTAGCCTTGACATTG 171417
Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
|| |||||||| ||||| ||||| | || || || || ||||| || || ||||
Sbjct 171418 TT--GATGGTGTCACTAGATTCAACCTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTCA 171475
Query 44325 CGAAGATTTGCAT 44337
| || ||||||||
Sbjct 171476 CAAATATTTGCAT 171488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359941270085166
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |