Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq55 170 2e-37 >seq55 Length=606834 Score = 170 bits (188), Expect = 2e-37 Identities = 573/877 (65%), Gaps = 19/877 (2%) Strand=Plus/Minus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 || || || | |||||| || || ||||||||||| || || | ||||| || |||| Sbjct 250540 TGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAACTCC 250481 Query 16736 ATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAAT 16795 || ||||||||||||| | | | | | ||| | || || || | | || Sbjct 250480 ATCCAATCAAAAGGATTCTGAACATTATAAACTTTCCCACAACCAAGCTCACCCAACAAC 250421 Query 16796 CTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGT 16855 ||||| || || || || ||||| |||| ||| || || | ||||| || | | ||| Sbjct 250420 CTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCCGACCA-ACGC 250362 Query 16856 AC-CGGAAGAGCTTCCGTCAAAAA-TCGTTGCTCTATAACAACCGCTTCCTTAATAATAC 16913 | |||||| || || | ||| || | ||| || ||||||| || | | ||| Sbjct 250361 GCACGGAAGCGCGTCACAAACAAACTCCCT-CTCAATCTCAACCGCATCACTCACAATCT 250303 Query 16914 TAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAAT 16973 | ||||| ||||| | || ||| | | || | | | || ||| || |||| Sbjct 250302 TCTTCACTCGCTCCTCACTCAGTTTATTCCTCAATAGTGAATAAAGCAAACAAGCAAAAT 250243 Query 16974 CGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCT 17033 | ||||| | ||| ||||| | ||||| ||||| ||||| || || || ||||| Sbjct 250242 CACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAAACCAGGCATTA 250183 Query 17034 TTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGA 17093 || ||||| || | |||||| || || ||| ||||| || || ||||| || | Sbjct 250182 AACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACCAGAGAAAAAAATACCTTCAA 250123 Query 17094 CGGATGCAAACGCGATTAATCGTTCGGCGTACG--TCGCGTCTTTGTTACGAATCCATTT 17151 || | ||||| || | | || ||| || ||| || || | | ||| ||||||| Sbjct 250122 CGCAAGCAAAAGCAACGATTCTTTCAGCAAACGAATC-CGAC---GAATCGA-TCCATTT 250068 Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTT 17211 | |||| || ||||| | || ||| ||||| || || || | ||| || Sbjct 250067 CAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATGAAACAAACG 250008 Query 17212 CTCTTTTTC--CTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAG 17269 | || || | | | ||| |||||||||| || | || || || |||||||| || Sbjct 250007 ATTCTTCTCAACCGAA--TCGCTTATATACGTTTCAAGAAGGAGACTATACATTTCAGAA 249950 Query 17270 TGTATGTTCTCCATGGCTATCTGAAATCCGTAAAA-GCATCGGGCTTCCGCTATTTGAAC 17328 ||||| ||||| || || || ||||| |||||||| ||| || || || | | |||||| Sbjct 249949 TGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCA-CGCGCCTCTGAAACTTGAAC 249891 Query 17329 TTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAA 17388 ||| ||||| | | || ||||| || |||||||||||| ||||||||||| Sbjct 249890 TTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGCGGCGAAAAA 249831 Query 17389 CGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAA 17448 || | | || | || | | |||| | || | | | ||| | | | Sbjct 249830 TGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCCAATGTTGAAG 249771 Query 17449 ATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACAT 17508 ||||| |||| ||| |||||||||| |||||| || || | || ||||| ||||| Sbjct 249770 ATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACAT 249711 Query 17509 ATTCCAAATATCATTGTATTGTATGGGGA--ATACAA 17543 | |||||| | | ||||| || |||| |||||| Sbjct 249710 TTCCCAAATTTTAGGGTATTCAATTGGGAACATACAA 249674 Score = 170 bits (188), Expect = 2e-37 Identities = 573/877 (65%), Gaps = 19/877 (2%) Strand=Plus/Minus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 || || || | |||||| || || ||||||||||| || || | ||||| || |||| Sbjct 259223 TGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAACTCC 259164 Query 16736 ATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAAT 16795 || ||||||||||||| | | | | | ||| | || || || | | || Sbjct 259163 ATCCAATCAAAAGGATTCTGAACATTATAAACTTTCCCACAACCAAGCTCACCCAACAAC 259104 Query 16796 CTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGT 16855 ||||| || || || || ||||| |||| ||| || || | ||||| || | | ||| Sbjct 259103 CTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCCGACCA-ACGC 259045 Query 16856 AC-CGGAAGAGCTTCCGTCAAAAA-TCGTTGCTCTATAACAACCGCTTCCTTAATAATAC 16913 | |||||| || || | ||| || | ||| || ||||||| || | | ||| Sbjct 259044 GCACGGAAGCGCGTCACAAACAAACTCCCT-CTCAATCTCAACCGCATCACTCACAATCT 258986 Query 16914 TAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAAT 16973 | ||||| ||||| | || ||| | | || | | | || ||| || |||| Sbjct 258985 TCTTCACTCGCTCCTCACTCAGTTTATTCCTCAATAGTGAATAAAGCAAACAAGCAAAAT 258926 Query 16974 CGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCT 17033 | ||||| | ||| ||||| | ||||| ||||| ||||| || || || ||||| Sbjct 258925 CACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAAACCAGGCATTA 258866 Query 17034 TTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGA 17093 || ||||| || | |||||| || || ||| ||||| || || ||||| || | Sbjct 258865 AACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACCAGAGAAAAAAATACCTTCAA 258806 Query 17094 CGGATGCAAACGCGATTAATCGTTCGGCGTACG--TCGCGTCTTTGTTACGAATCCATTT 17151 || | ||||| || | | || ||| || ||| || || | | ||| ||||||| Sbjct 258805 CGCAAGCAAAAGCAACGATTCTTTCAGCAAACGAATC-CGAC---GAATCGA-TCCATTT 258751 Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTT 17211 | |||| || ||||| | || ||| ||||| || || || | ||| || Sbjct 258750 CAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATGAAACAAACG 258691 Query 17212 CTCTTTTTC--CTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAG 17269 | || || | | | ||| |||||||||| || | || || || |||||||| || Sbjct 258690 ATTCTTCTCAACCGAA--TCGCTTATATACGTTTCAAGAAGGAGACTATACATTTCAGAA 258633 Query 17270 TGTATGTTCTCCATGGCTATCTGAAATCCGTAAAA-GCATCGGGCTTCCGCTATTTGAAC 17328 ||||| ||||| || || || ||||| |||||||| ||| || || || | | |||||| Sbjct 258632 TGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCA-CGCGCCTCTGAAACTTGAAC 258574 Query 17329 TTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAA 17388 ||| ||||| | | || ||||| || |||||||||||| ||||||||||| Sbjct 258573 TTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGCGGCGAAAAA 258514 Query 17389 CGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAA 17448 || | | || | || | | |||| | || | | | ||| | | | Sbjct 258513 TGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCCAATGTTGAAG 258454 Query 17449 ATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACAT 17508 ||||| |||| ||| |||||||||| |||||| || || | || ||||| ||||| Sbjct 258453 ATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACAT 258394 Query 17509 ATTCCAAATATCATTGTATTGTATGGGGA--ATACAA 17543 | |||||| | | ||||| || |||| |||||| Sbjct 258393 TTCCCAAATTTTAGGGTATTCAATTGGGAACATACAA 258357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517499493156360