Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq55 159 4e-34 seq104 109 6e-19 >seq55 Length=606834 Score = 159 bits (176), Expect = 4e-34 Identities = 394/587 (67%), Gaps = 17/587 (3%) Strand=Plus/Minus Query 16201 ACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAA 16260 ||| || || || ||||| ||||||||||| | ||||| ||||| ||||||||||| Sbjct 250253 ACAAGCAAAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAA 250194 Query 16261 CCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAA 16320 || |||||| || ||||| || | ||| || || ||| || || || || || Sbjct 250193 ACCAGGCATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACCAGAGAAAAA 250134 Query 16321 TATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACG 16380 ||||| ||||| | |||||||| | | || ||| || ||| | | || || Sbjct 250133 AATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAACGAATCCGACGAAT--CG 250076 Query 16381 AATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTT 16440 ||||||||| |||| || ||||| | |||||| ||||| || || || | Sbjct 250075 -ATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATG 250017 Query 16441 AAACAATTTCTCTTTTTC--CTGAATATCGATTATATACGTATCAATCAGTAAACTGTAC 16498 |||||| | || || | || |||| |||||||||| |||| || | ||| ||| Sbjct 250016 AAACAAACGATTCTTCTCAACCGA--ATCGCTTATATACGTTTCAAGAAGGAGACTATAC 249959 Query 16499 ATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCAT-AGAAGCATCGAGCCTCCGC 16557 ||||| || ||||| ||||| || || || ||||| || | | ||||| || ||||| | Sbjct 249958 ATTTCAGAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCA-CGCGCCTCTGA 249900 Query 16558 TATTTGTACTTC---CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACT 16614 | ||| ||||| || | |||| | | || || ||||| ||||| ||||| Sbjct 249899 AACTTGAACTTCTTTCATG---AATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGA 249843 Query 16615 TGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATG 16674 ||| || ||||| || | | ||| | || | | |||| | || | | | | Sbjct 249842 TGCGGCGAAAAATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTT 249783 Query 16675 CCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGC 16734 ||||| || | ||||| |||| ||| |||||||| | ||||| || || | || Sbjct 249782 CCAATGTTGAAGATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGC 249723 Query 16735 CTTTTTATACATTTTCCAAATATCATTGTATTGTA-TGGGAA-ATAC 16779 ||||| ||||||| |||||| | | ||||| | |||||| |||| Sbjct 249722 TTTTTTGTACATTTCCCAAATTTTAGGGTATTCAATTGGGAACATAC 249676 Score = 159 bits (176), Expect = 4e-34 Identities = 394/587 (67%), Gaps = 17/587 (3%) Strand=Plus/Minus Query 16201 ACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAA 16260 ||| || || || ||||| ||||||||||| | ||||| ||||| ||||||||||| Sbjct 258936 ACAAGCAAAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAA 258877 Query 16261 CCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAA 16320 || |||||| || ||||| || | ||| || || ||| || || || || || Sbjct 258876 ACCAGGCATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACCAGAGAAAAA 258817 Query 16321 TATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACG 16380 ||||| ||||| | |||||||| | | || ||| || ||| | | || || Sbjct 258816 AATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAACGAATCCGACGAAT--CG 258759 Query 16381 AATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTT 16440 ||||||||| |||| || ||||| | |||||| ||||| || || || | Sbjct 258758 -ATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATG 258700 Query 16441 AAACAATTTCTCTTTTTC--CTGAATATCGATTATATACGTATCAATCAGTAAACTGTAC 16498 |||||| | || || | || |||| |||||||||| |||| || | ||| ||| Sbjct 258699 AAACAAACGATTCTTCTCAACCGA--ATCGCTTATATACGTTTCAAGAAGGAGACTATAC 258642 Query 16499 ATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCAT-AGAAGCATCGAGCCTCCGC 16557 ||||| || ||||| ||||| || || || ||||| || | | ||||| || ||||| | Sbjct 258641 ATTTCAGAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCA-CGCGCCTCTGA 258583 Query 16558 TATTTGTACTTC---CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACT 16614 | ||| ||||| || | |||| | | || || ||||| ||||| ||||| Sbjct 258582 AACTTGAACTTCTTTCATG---AATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGA 258526 Query 16615 TGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATG 16674 ||| || ||||| || | | ||| | || | | |||| | || | | | | Sbjct 258525 TGCGGCGAAAAATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTT 258466 Query 16675 CCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGC 16734 ||||| || | ||||| |||| ||| |||||||| | ||||| || || | || Sbjct 258465 CCAATGTTGAAGATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGC 258406 Query 16735 CTTTTTATACATTTTCCAAATATCATTGTATTGTA-TGGGAA-ATAC 16779 ||||| ||||||| |||||| | | ||||| | |||||| |||| Sbjct 258405 TTTTTTGTACATTTCCCAAATTTTAGGGTATTCAATTGGGAACATAC 258359 >seq104 Length=244920 Score = 109 bits (120), Expect = 6e-19 Identities = 250/370 (68%), Gaps = 6/370 (2%) Strand=Plus/Plus Query 16201 ACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAA 16260 ||| ||||| || ||||| ||||||||||| | ||||| ||||| ||||||||||| Sbjct 172066 ACAAGCGAAATCACAATGAAGTCCTTCGTCACACAAAATAAGCTCGTTTGAAAAAGTTAA 172125 Query 16261 CCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAA 16320 || ||||| || ||||| || | ||| ||||||||| || | || || || Sbjct 172126 ACCATGCATTAAACCACGTTTTTTAAGCCAAAATATCGCACATAAACTACTAGAGAAAAA 172185 Query 16321 TATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACG 16380 ||||| ||||| | |||||||| | | || ||| | | | | | || || Sbjct 172186 AATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAACAATCAAATCGAC-GAAT--CG 172242 Query 16381 AATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTT 16440 ||||||||| |||| || ||||| | |||||| ||||| || || || | Sbjct 172243 -ATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATG 172301 Query 16441 AAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACAT 16500 |||||| | || || | |||| ||||||| || |||| || | ||| ||||| Sbjct 172302 AAACAAACAATTCTTCTCAACCAAATCGCTTATATATGTTTCAAGAAGGAGACTATACAT 172361 Query 16501 TTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAG-AAGCATCGAGCCTCCGCTA 16559 ||| || ||||| ||||| || || || || || | ||| ||||| || || || | | Sbjct 172362 TTCAGAATGTATATTCTCAATCGCGATTTGGAACCTGTAGAAAGCA-CGCGCTTCTGAAA 172420 Query 16560 TTTGTACTTC 16569 ||| ||||| Sbjct 172421 CTTGAACTTC 172430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511368839369640