Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq55 232 8e-56 seq104 154 2e-32 seq5 95.1 1e-14 seq6 86.0 7e-12 >seq55 Length=606834 Score = 232 bits (256), Expect = 8e-56 Identities = 602/908 (66%), Gaps = 10/908 (1%) Strand=Plus/Minus Query 23843 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATT 23902 ||| || ||||| || || || || || ||||| ||||| || |||| | || || Sbjct 250544 TTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAA 250485 Query 23903 TTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAAT 23962 ||||| |||| | ||||| ||||||||| | | | | | || | ||| | Sbjct 250484 CTCCATCCAATCAAAAGGATTCTGAACATTATAAACTTTCCCACAACCAAGCTCACCCAA 250425 Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTAT-AA 24021 ||| ||||| || || ||||| ||||| |||||| |||| |||||| || | || Sbjct 250424 CAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCCGACCAA 250365 Query 24022 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 24081 || ||||| || || || ||| || ||||| ||||| || | | || Sbjct 250364 CGCGCAC-GGAAGCGCGTCACAAACAAACTCCCTCTCAATCTCAACCGCATCACTCACAA 250306 Query 24082 TAGATCTT-ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 24140 | |||| ||| || |||||| || || | || || | | | |||||| || Sbjct 250305 TCT-TCTTCACTCGCTCCTCACTCAGTTTATTCCTCAATAGTGAATAAAGCAAACAAGCA 250247 Query 24141 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 24200 ||||| || || || || ||||| | ||| | ||||| ||||| || | || ||| Sbjct 250246 AAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAAACCAGGC 250187 Query 24201 ATTAGGCCACGCTTTTTAAGCCAAAATATGG-ACGCAAATGATCCAGAAAAGAAAATTCC 24259 |||| ||||| |||||||||||||| || | || ||| | ||||| || ||||| || Sbjct 250186 ATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTA-CCAGAGAAAAAAATACC 250128 Query 24260 TTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTC--ATGTATCCAC 24317 ||| || ||||| |||| | |||||| || | || | | | || ||||| Sbjct 250127 TTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAA--CGAATCCGACGAATCGATCCAT 250070 Query 24318 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 24377 || ||||||||| || ||||| | |||||| || ||||| ||||||| ||| | | Sbjct 250069 TTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATGAAACAAA 250010 Query 24378 TAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAA 24437 || || ||| ||| | | ||| || |||| | |||||||||||||| ||| Sbjct 250009 CGATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGGAGACTATACATTTCAGAA 249950 Query 24438 TGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 24497 || || || ||||| || |||||||| ||||| ||| | ||||| | || || ||| Sbjct 249949 TGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCGCCTCTGAAACTTGAACT 249890 Query 24498 TCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 24557 ||| | |||| | | || | ||| || || || ||||| || || ||||| Sbjct 249889 TCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGCGGCGAAAAAT 249830 Query 24558 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATA 24617 || | || || || ||| | | |||| | |||| || ||||||| | | | Sbjct 249829 GCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCCAATGTTGAAGA 249770 Query 24618 TCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATA 24677 |||| |||| ||| |||||||| | ||||| ||||| || || || ||||| ||||| Sbjct 249769 TCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACATT 249710 Query 24678 TTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGG 24737 | ||| || | | | |||| |||||| || ||| ||| | | ||| ||| ||||| Sbjct 249709 TCCCAAATTTTAGGGTATTCAATTGGGAACATACAAAAACGGTCTGGGTTTGGAGCAAGA 249650 Query 24738 ATTGGTTC 24745 | ||| || Sbjct 249649 AGTGGCTC 249642 Score = 232 bits (256), Expect = 8e-56 Identities = 602/908 (66%), Gaps = 10/908 (1%) Strand=Plus/Minus Query 23843 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATT 23902 ||| || ||||| || || || || || ||||| ||||| || |||| | || || Sbjct 259227 TTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAA 259168 Query 23903 TTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAAT 23962 ||||| |||| | ||||| ||||||||| | | | | | || | ||| | Sbjct 259167 CTCCATCCAATCAAAAGGATTCTGAACATTATAAACTTTCCCACAACCAAGCTCACCCAA 259108 Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTAT-AA 24021 ||| ||||| || || ||||| ||||| |||||| |||| |||||| || | || Sbjct 259107 CAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCCGACCAA 259048 Query 24022 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 24081 || ||||| || || || ||| || ||||| ||||| || | | || Sbjct 259047 CGCGCAC-GGAAGCGCGTCACAAACAAACTCCCTCTCAATCTCAACCGCATCACTCACAA 258989 Query 24082 TAGATCTT-ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 24140 | |||| ||| || |||||| || || | || || | | | |||||| || Sbjct 258988 TCT-TCTTCACTCGCTCCTCACTCAGTTTATTCCTCAATAGTGAATAAAGCAAACAAGCA 258930 Query 24141 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 24200 ||||| || || || || ||||| | ||| | ||||| ||||| || | || ||| Sbjct 258929 AAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAAACCAGGC 258870 Query 24201 ATTAGGCCACGCTTTTTAAGCCAAAATATGG-ACGCAAATGATCCAGAAAAGAAAATTCC 24259 |||| ||||| |||||||||||||| || | || ||| | ||||| || ||||| || Sbjct 258869 ATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTA-CCAGAGAAAAAAATACC 258811 Query 24260 TTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTC--ATGTATCCAC 24317 ||| || ||||| |||| | |||||| || | || | | | || ||||| Sbjct 258810 TTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAA--CGAATCCGACGAATCGATCCAT 258753 Query 24318 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 24377 || ||||||||| || ||||| | |||||| || ||||| ||||||| ||| | | Sbjct 258752 TTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATGAAACAAA 258693 Query 24378 TAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAA 24437 || || ||| ||| | | ||| || |||| | |||||||||||||| ||| Sbjct 258692 CGATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGGAGACTATACATTTCAGAA 258633 Query 24438 TGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 24497 || || || ||||| || |||||||| ||||| ||| | ||||| | || || ||| Sbjct 258632 TGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCGCCTCTGAAACTTGAACT 258573 Query 24498 TCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 24557 ||| | |||| | | || | ||| || || || ||||| || || ||||| Sbjct 258572 TCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGCGGCGAAAAAT 258513 Query 24558 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATA 24617 || | || || || ||| | | |||| | |||| || ||||||| | | | Sbjct 258512 GCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCCAATGTTGAAGA 258453 Query 24618 TCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATA 24677 |||| |||| ||| |||||||| | ||||| ||||| || || || ||||| ||||| Sbjct 258452 TCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACATT 258393 Query 24678 TTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGG 24737 | ||| || | | | |||| |||||| || ||| ||| | | ||| ||| ||||| Sbjct 258392 TCCCAAATTTTAGGGTATTCAATTGGGAACATACAAAAACGGTCTGGGTTTGGAGCAAGA 258333 Query 24738 ATTGGTTC 24745 | ||| || Sbjct 258332 AGTGGCTC 258325 >seq104 Length=244920 Score = 154 bits (170), Expect = 2e-32 Identities = 246/347 (71%), Gaps = 11/347 (3%) Strand=Plus/Plus Query 24132 AAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT-TCGTTGGAAAACGT 24190 ||||| |||||||| || || || || ||||| | || || ||| ||||| ||||| || Sbjct 172064 AAACAAGCGAAATCACAATGAAGTCCTTCGTCAC-ACAAAATAAGCTCGTTTGAAAAAGT 172122 Query 24191 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGG-ACGCAAATGATCCAGAAA 24249 | || |||||| ||||| ||||||||||||||||| | || ||| | | ||| | Sbjct 172123 TAAACCATGCATTAAACCACGTTTTTTAAGCCAAAATATCGCACATAAACTA-CTAGAGA 172181 Query 24250 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCAT---AACCGGCGCTGT 24306 | ||||| ||||| || ||||| |||| | |||||| || || || || Sbjct 172182 AAAAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAACAATCAAATCGACGA--- 172238 Query 24307 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 24366 || ||||| || ||||||||| || ||||| | |||||| || ||||| |||| Sbjct 172239 -ATCGATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAG 172297 Query 24367 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 24426 ||| ||| | | | || || ||| ||| | | |||||| |||| | ||||||| Sbjct 172298 CATGAAACAAACAATTCTTCTCAACCAAATCGCTTATATATGTTTCAAGAAGGAGACTAT 172357 Query 24427 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAA 24473 ||||||| ||||| || || ||||| || ||||| || | ||||||| Sbjct 172358 ACATTTCAGAATGTATATTCTCAATCGCGATTTGGAACCTGTAGAAA 172404 >seq5 Length=48169137 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 54184 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 54243 ||| |||||||| | || | || |||| |||| | || | || |||||||| |||||| Sbjct 35185794 TCCACCCTGATCAACATAGCGGGCAGTGTCATTAAACACACGCAGCATTGGAACAATACC 35185735 Query 54244 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 54303 ||| || | ||||| || || || || || ||| |||||| || ||| ||| || Sbjct 35185734 ATTAGACGTCCCATTTGTTCCACGAATGTAACTACCATGGGCACGTATGTTATGAATAGA 35185675 Query 54304 TAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 54363 | ||| || || ||||| |||| || | || || || || |||||||| || Sbjct 35185674 AACACCAATTCCTCCTGCAGATTTACTAATAATAGCACACTCCTTCAATGTATCATAAAT 35185615 Query 54364 GCCCTCTATACTATCATCCATCATG 54388 ||||| ||||||||||| ||||| Sbjct 35185614 CCCCTCAATACTATCATCTTTCATG 35185590 >seq6 Length=59463898 Score = 86.0 bits (94), Expect = 7e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 54184 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 54243 ||| |||||||| | || | || |||| |||| | || | | |||||||| |||||| Sbjct 7426929 TCCACCCTGATCAACATAGCGGGCAGTGTCATTAAACACACGGAGCATTGGAACAATACC 7426870 Query 54244 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 54303 ||| |||| ||||| || || || || || ||| ||||| || ||| || || Sbjct 7426869 ATTAGATGTCCCATTTGTTCCTCGAATGTAACTACCATGTGCACGTATGTTATGAACAGA 7426810 Query 54304 TAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 54363 | ||| || || ||||| |||| || | || || || || |||||||| || Sbjct 7426809 AACACCAATTCCTCCTGCAGATTTACTAATAACAGCACACTCCTTCAAAGTATCATAAAT 7426750 Query 54364 GCCCTCTATACTATCATCCATCATG 54388 ||||| ||||||||||| ||||| Sbjct 7426749 CCCCTCAATACTATCATCTTTCATG 7426725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593668706826960