Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq6 98.7 9e-16 seq4 82.4 7e-11 >seq6 Length=59463898 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||||||||| | || ||| | || || || || |||||| ||| |||| | | Sbjct 20998431 ATGCAAATATTTGTGAAGACACTTACTGGGAAGACTATTACCTTAGAAGTGGAAAGCTCT 20998490 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | || ||| ||| ||||| || ||| | ||| |||||| Sbjct 20998491 GACACAATTGATAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATTCCCCCAGATCAG 20998550 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||||| ||||| ||||| ||||| || |||| ||| ||| |||| ||||||||| Sbjct 20998551 CAAAGGCTTATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACTTTGGCAGATTACAAT 20998610 Query 29142 ATTCAGAAGGAATCTACTCTTCAC 29165 |||||||| |||||||| || ||| Sbjct 20998611 ATTCAGAAAGAATCTACCCTGCAC 20998634 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| |||||| | || || ||||| || |||||||| ||| || ||| | | Sbjct 20997291 ATGCAGATATTCGTTAAGACCTTGACCGGAAAAACCATCACCCTTGAGGTTGAATCGTCT 20997350 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || ||| | | || | ||| || || || ||||| ||| | || ||||| Sbjct 20997351 GATACGATTGATAATGTCAAGGCCAAGATCCAGGACAAAGAGGGTATCCCTCCTGATCAG 20997410 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || ||||||||||| || |||||||| || ||| | ||| | || |||||||| Sbjct 20997411 CAGAGGCTTATCTTTGCAGGGAAACAACTTGAGGATGGTAGAACCCTAGCTGATTACAAC 20997470 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || ||||| || ||||| ||||| ||||| | ||||| |||| || Sbjct 20997471 ATCCAGAAAGAGTCTACCCTTCATTTGGTGCTTCGATTGAGAGGTGG 20997517 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| | || || | || ||||| ||||| || ||| || || Sbjct 17145659 ATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATAACTCTCGAGGTTGAGAGTTCA 17145718 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || ||||| || ||| || || ||||| | || ||| ||| Sbjct 17145719 GATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGCATCCCACCAGACCAA 17145778 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || || ||||||||||||||||| || |||||| | |||| |||| |||||||| Sbjct 17145779 CAGAGGCTCATCTTTGCGGGCAAACAGCTTGAAGATGGCCGAACTTTGGCAGATTACAAC 17145838 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 || || ||||| || || ||||| ||||| | || | || || ||| Sbjct 17145839 ATCCAAAAGGAGTCCACACTTCATTTGGTGCTCCGTCTCCGTGGTGGG 17145886 Score = 86.0 bits (94), Expect = 5e-12 Identities = 102/137 (74%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| || ||| | || |||||| || || ||||||||||| || ||||| || ||| Sbjct 20998068 GATAAGGAGGGTATCCCACCAGATCAGCAGAGGCTTATCTTTGCTGGTAAACAGCTTGAA 20998127 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | ||| | |||||||| || || || ||||| || || |||||| |||| ||| Sbjct 20998128 GATGGAAGGACTCTTGCCGATTATAACATCCAAAAGGAGTCCACACTTCACTTGGTTTTA 20998187 Query 29175 CGATTACGAGGAGGGTA 29191 || | || || ||||| Sbjct 20998188 CGGCTTCGTGG-GGGTA 20998203 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 29075 AGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGA 29134 ||| ||||| || || || ||||| |||||||| || || ||| | |||| | || || Sbjct 17161558 AGACCAACAGAGGCTCATTTTTGCTGGCAAACAGCTTGAGGATGGCCGAACTTTAGCAGA 17161617 Query 29135 TTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||||||||||||| ||||| || ||||| ||||| | ||| | || || || Sbjct 17161618 TTACAATATTCAGAAAGAATCCACCCTTCATTTGGTGCTCCGACTCCGTGGTGG 17161671 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || | || || ||||| || || ||||| || || |||| || Sbjct 17162129 ATGCAGATCTTTGTAAAGACTTTGACAGGAAAGACCATAACTTTGGAGGTGGAAAGTTCA 17162188 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| ||||||| || || || || | || |||||| Sbjct 17162189 GACACAATTGACAATGTAAAGGCAAAAATTCAAGACAAGGAGGGAATCCCACCAGATCAG 17162248 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||||| | |||||||| || || ||| |||| ||| | || | || || ||||| Sbjct 17162249 CAAAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGAAGGACCCTAGCTGACTACAAC 17162308 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 ||||||||||| |||||||||||| | ||||| || Sbjct 17162309 ATTCAGAAGGAGTCTACTCTTCACCTCGTGTTGCG 17162343 >seq4 Length=49191682 Score = 82.4 bits (90), Expect = 7e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135 |||||||| | ||||| ||||| || |||||||| |||||| ||| | || ||| Sbjct 19846513 GATCAACAGCGTCTTATTTTTGCTGGTAAACAACTTGAAGATGGACGCACTCTTGCTGAT 19846454 Query 29136 TACAATATTCAGAAGGAATCTACTCTTCAC 29165 || |||||||||||||||||||| |||||| Sbjct 19846453 TATAATATTCAGAAGGAATCTACACTTCAC 19846424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428298794601185