Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq6 107 2e-18 seq4 98.7 8e-16 >seq6 Length=59463898 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| ||| | |||||||| || |||||||| || || |||| ||| || | || Sbjct 17146098 AGCACCAAATGGAGGGTGGACTCTTTCTGAATGTTGTAATCTGCCAAAGTTCGGCCATCT 17146039 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||||||||| ||| | || || ||||| ||||| || | ||| || ||||| Sbjct 17146038 TCAAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGGTCTGGTGGAATGCCCTCTTTGTCC 17145979 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||| || || | | ||| |||||| | |||| || | || |||||| Sbjct 17145978 TGAATCTTAGCCTTTACATTGTCGATGGTATCAGAGCTCTCCACCTCAAGAGTGATGGTC 17145919 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || ||||| | || || |||||||||||||| Sbjct 17145918 TTTCCGGTGAGAGTCTTCACAAATATTTGCAT 17145887 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | |||||||| ||| | || ||||| ||||| ||||| || || | Sbjct 17161445 TTCCACCACGGAGACGGAGCACCAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAG 17161386 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | ||||| | | ||||||||||| ||||| ||| |||| || | ||||||||| | Sbjct 17161385 CAAGGGTACGCCCATCCTCCAGCTGCTTGCCTGCAAAAATGAGACGCTGCTGGTCTGGTG 17161326 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | |||||||||||| ||||| || || | | | | ||||| ||| Sbjct 17161325 GGATGCCTTCCTTGTCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAA 17161266 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | || ||||| ||||| || | || || |||||||||||||| Sbjct 17161265 CTTCGAGAGTGATGGTTTTGCCAGTGAGGGTCTTCACAAATATTTGCAT 17161217 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||| | |||||||||||||| ||||| || || ||| Sbjct 17145885 CCACCACGGAGACGGAGCACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAATCTGCC 17145826 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| || | || || ||||||||||||||| | || || ||||| ||||| || Sbjct 17145825 AAAGTTCGGCCATCTTCAAGCTGTTTGCCCGCAAAGATGAGCCTCTGTTGGTCTGGTGGG 17145766 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| ||||| || || | | | | ||||| ||| Sbjct 17145765 ATGCCTTCCTTGTCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACC 17145706 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || | || || || || |||||||| Sbjct 17145705 TCGAGAGTTATGGTCTTGCCAGTGAGGGTCTTAACGAAAATTTGCAT 17145659 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || || ||||| | ||| | ||||| || ||||| ||||| || || || Sbjct 20997289 CCACCTCTCAACCGAAGCACTAAATGAAGGGTGGATTCTTTTTGGATGTTGTAATCAGCA 20997230 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || || | ||||| || || | |||||||| || || || || Sbjct 20997229 AGGGTACGGCCATCTTCTAATTGTTTACCGGCGAAGATAAGTCTTTGTTGATCTGGTGGG 20997170 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| |||||| | | | | ||||| |||| Sbjct 20997169 ATCCCTTCCTTGTCTTGGATCTTAGCTTTCACGTTGTCTATGGTATCGGAACTCTCCACC 20997110 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| ||||| |||||||| || ||||| || || |||||||| Sbjct 20997109 TCAAGGGTGATGGTTTTGCCGGTCAATGTTTTCACGAAGATTTGCAT 20997063 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||| | ||||| || || ||||| || || || || Sbjct 17161671 CCACCACGGAGTCGGAGCACCAAATGAAGGGTGGATTCTTTCTGAATATTGTAATCTGCT 17161612 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| || | ||||| ||||||||||| ||| |||| || ||||| ||||| || Sbjct 17161611 AAAGTTCGGCCATCCTCAAGCTGTTTGCCAGCAAAAATGAGCCTCTGTTGGTCTGGTGGA 17161552 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| || || | | | | ||||||| | ||| Sbjct 17161551 ATGCTCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATAGTATCAGAGCTTTCCACC 17161492 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||| || ||||| || || | || || || || ||||||||| Sbjct 17161491 TCAAGGGTGATCGTCTTTCCAGTGAGAGTCTTCACGAAGATTTGCATT 17161444 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||| || |||| | |||| || | |||||||||||||| |||||||| || || Sbjct 20998201 CCCCCACGAAGCCGTAAAACCAAGTGAAGTGTGGACTCCTTTTGGATGTTATAATCGGCA 20998142 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | || || |||||||| || ||| | ||||| |||||||| || || Sbjct 20998141 AGAGTCCTTCCATCTTCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGG 20998082 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || ||||| || ||||| |||||| | | | |||||| ||| Sbjct 20998081 ATACCCTCCTTATCTTGAATCTTGGCTTTCACATTATCAATAGTATCTGAACTCTCTACC 20998022 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| ||||| ||||| || || || || || ||||| ||||||||| Sbjct 20998021 TCCAAAGTAATAGTCTTTCCTGTCAAAGTCTTAACAAAAATTTGCATT 20997974 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | ||| || ||||| || ||||| ||||| || Sbjct 9515637 CCACCGCGGAGACGGAGGACAAGGTGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGGCG 9515696 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || |||| |||| ||| || || || | || || | ||| ||||| || Sbjct 9515697 AGAGTGCGGCCGTCTTCCAACTGCTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGTGGA 9515756 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||||| ||| || | | ||| || || | |||| Sbjct 9515757 ATTCCTTCCTTGTCTTGGATCTTTGCTTTGACATTGTCGATTGTGTCGGAAGACTCCACC 9515816 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | ||| || ||||| || |||| ||||| || || || ||||| ||| Sbjct 9515817 TCGAGGGTGATCGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTTG 9515867 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||| || || || || ||||| || || || |||| || | | ||||||| ||| Sbjct 20998633 TGCAGGGTAGATTCTTTCTGAATATTGTAATCTGCCAAAGTACGACCATCCTCCAACTGC 20998574 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 ||||| ||| ||||||| || ||||| || ||| | || ||||| || |||||| Sbjct 20998573 TTGCCAGCAAAAATAAGCCTTTGCTGATCTGGGGGAATACCCTCCTTATCCTGAATCTTT 20998514 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 |||||| | | | || ||| | ||| ||| | |||||| ||||| || || Sbjct 20998513 GCTTTCACATTATCAATTGTGTCAGAGCTTTCCACTTCTAAGGTAATAGTCTTCCCAGTA 20998454 Query 21153 AACGTTTTGACAAATATTTGCAT 21175 | || || |||||||||||||| Sbjct 20998453 AGTGTCTTCACAAATATTTGCAT 20998431 >seq4 Length=49191682 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | ||| |||||||| || ||||| ||||| || Sbjct 14093544 CCTCCACGAAGACGGAGGACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCA 14093603 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| || || || | || || | ||||||||| || Sbjct 14093604 AGGGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCCGGAGGA 14093663 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | ||| ||||||| ||| Sbjct 14093664 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTATCGATAGTATCAGAACTCTCTACC 14093723 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||||||||| | ||||| || || |||||||| Sbjct 14093724 TCGAGAGTGATTGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 14093770 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| || | ||| || | || || ||||| || || Sbjct 14093118 GTTGACTCCTTCTGGATGTTGTAGTCAGCTAAGGTGCGGCCATCTTCAAGCTGCTTTCCG 14093177 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || |||||||||||||| || | ||||||||||| |||||| ||| Sbjct 14093178 GCGAAGATGAGTCTCTGCTGGTCTGGTGGGATTCCTTCCTTGTCTTGGATCTTAGCCTTC 14093237 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || ||| | || ||| | || |||||||| ||||| | || Sbjct 14093238 ACGTTGTCGATGGTGTCAGAGCTTTCAACTTCGAGAGTGATGGTCTTACCGGTGAGGGTC 14093297 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 14093298 TTCACAAAGATCTGCAT 14093314 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | || || ||||| || || || ||||| || Sbjct 14093316 CCTCCACGAAGACGGAGGACGAGATGAAGGGTAGATTCCTTCTGGATATTGTAGTCGGCG 14093375 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||| || || || || || | |||||||||||||||||| ||| Sbjct 14093376 AGGGTACGACCGTCCTCAAGTTGCTTTCCGGCGAAGATAAGTCTCTGCTGGTCCGGGGGA 14093435 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| ||| || | ||| || || | || Sbjct 14093436 ATTCCTTCCTTGTCTTGGATCTTGGCTTTAACGTTATCGATGGTGTCGGAGCTTTCGACC 14093495 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || | || ||||| || || ||||| Sbjct 14093496 TCAAGAGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 14093542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422222522433932