Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq6 98.7 8e-16 seq5 87.8 1e-12 >seq6 Length=59463898 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||||||||| | || ||| | || || || || |||||| ||| |||| | | Sbjct 20998431 ATGCAAATATTTGTGAAGACACTTACTGGGAAGACTATTACCTTAGAAGTGGAAAGCTCT 20998490 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | || ||| ||| ||||| || ||| | ||| |||||| Sbjct 20998491 GACACAATTGATAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATTCCCCCAGATCAG 20998550 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||||| ||||| ||||| ||||| || ||||| ||| ||| |||| ||||||||| Sbjct 20998551 CAAAGGCTTATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACTTTGGCAGATTACAAT 20998610 Query 25215 ATTCAAAAGGAATCTACTCTTCAC 25238 ||||| || |||||||| || ||| Sbjct 20998611 ATTCAGAAAGAATCTACCCTGCAC 20998634 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | ||||||||||| ||||||||||| ||| || ||| | Sbjct 20997063 ATGCAAATCTTCGTGAAAACATTGACCGGCAAAACCATCACCCTTGAGGTGGAGAGTTCC 20997122 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | | || || || || || ||||| | || ||||||| Sbjct 20997123 GATACCATAGACAACGTGAAAGCTAAGATCCAAGACAAGGAAGGGATCCCACCAGATCAA 20997182 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 |||||||||||||| || || |||||||| |||||| | || | || |||||||| Sbjct 20997183 CAAAGACTTATCTTCGCCGGTAAACAATTAGAAGATGGCCGTACCCTTGCTGATTACAAC 20997242 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||||| ||||| || ||||| | ||| | || || |||| || Sbjct 20997243 ATCCAAAAAGAATCCACCCTTCATTTAGTGCTTCGGTTGAGAGGTGG 20997289 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| |||||| | || || ||||| || |||||||| ||| || ||| | | Sbjct 20997291 ATGCAGATATTCGTTAAGACCTTGACCGGAAAAACCATCACCCTTGAGGTTGAATCGTCT 20997350 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | || ||||| || || || ||||| ||| | || ||||| Sbjct 20997351 GATACGATTGATAATGTCAAGGCCAAGATCCAGGACAAAGAGGGTATCCCTCCTGATCAG 20997410 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || || ||||||||||| || |||||| | || ||| | ||| | || |||||||| Sbjct 20997411 CAGAGGCTTATCTTTGCAGGGAAACAACTTGAGGATGGTAGAACCCTAGCTGATTACAAC 20997470 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || || || || ||||| ||||| ||||| | ||||| |||| || Sbjct 20997471 ATCCAGAAAGAGTCTACCCTTCATTTGGTGCTTCGATTGAGAGGTGG 20997517 Score = 89.7 bits (98), Expect = 4e-13 Identities = 153/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | || || ||||| || || ||||||||| ||| ||| | | Sbjct 20997519 ATGCAAATTTTTGTTAAGACTTTGACAGGGAAGACCATTACCCTCGAGGTTGAATCTTCT 20997578 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | || |||| || || || ||||| ||| | || ||||| Sbjct 20997579 GATACGATTGATAATGTCAAAGCCAAGATCCAGGACAAAGAGGGTATCCCTCCTGATCAG 20997638 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212 || || |||||||| || || || |||||||||||| || | ||| || ||||||| Sbjct 20997639 CAGAGGCTTATCTTCGCCGGTAAGCAATTGGAAGATGGTCGCACCCTA--GCTGATTACA 20997696 Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATT 25252 |||| ||||||||||| || ||||| |||| | ||||| Sbjct 20997697 ATATCCAAAAGGAATCCACCCTTCATTTGGTACTTCGATT 20997736 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | || || | || ||||| ||||| || ||| || || Sbjct 17145659 ATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATAACTCTCGAGGTTGAGAGTTCA 17145718 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | || | ||| || ||| || || ||||| | || ||| ||| Sbjct 17145719 GATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGCATCCCACCAGACCAA 17145778 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || || || ||||||||||||||||| | |||||| | |||| |||| |||||||| Sbjct 17145779 CAGAGGCTCATCTTTGCGGGCAAACAGCTTGAAGATGGCCGAACTTTGGCAGATTACAAC 17145838 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 25262 || |||||||| || || ||||| ||||| | || | || || ||| Sbjct 17145839 ATCCAAAAGGAGTCCACACTTCATTTGGTGCTCCGTCTCCGTGGTGGG 17145886 Score = 86.0 bits (94), Expect = 5e-12 Identities = 102/137 (74%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 ||||| || ||| | || |||||| || || ||||||||||| || ||||| | ||| Sbjct 20998068 GATAAGGAGGGTATCCCACCAGATCAGCAGAGGCTTATCTTTGCTGGTAAACAGCTTGAA 20998127 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 ||| | ||| | |||||||| || || |||||||| || || |||||| |||| ||| Sbjct 20998128 GATGGAAGGACTCTTGCCGATTATAACATCCAAAAGGAGTCCACACTTCACTTGGTTTTA 20998187 Query 25248 CGATTACGAGGAGGGTA 25264 || | || || ||||| Sbjct 20998188 CGGCTTCGTGG-GGGTA 20998203 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || | || || ||||| || || ||||| || || |||| || Sbjct 17162129 ATGCAGATCTTTGTAAAGACTTTGACAGGAAAGACCATAACTTTGGAGGTGGAAAGTTCA 17162188 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | || | ||| ||||||| || || || || | || |||||| Sbjct 17162189 GACACAATTGACAATGTAAAGGCAAAAATTCAAGACAAGGAGGGAATCCCACCAGATCAG 17162248 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||||| | |||||||| || || |||||||| ||| | || | || || ||||| Sbjct 17162249 CAAAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGAAGGACCCTAGCTGACTACAAC 17162308 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 ||||| ||||| |||||||||||| | ||||| || Sbjct 17162309 ATTCAGAAGGAGTCTACTCTTCACCTCGTGTTGCG 17162343 >seq5 Length=48169137 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || ||| | ||||| | || ||||||||||||||| || || | Sbjct 36920510 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACCATTACCCTAGAGGTAGAGAGTTCC 36920569 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | | ||| ||||||| || || || ||| | || ||| || Sbjct 36920570 GATACAATCGACAACGTGAAGGCAAAAATTCAAGACAAGGAGGGTATTCCTCCAGACCAG 36920629 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| || | ||||| || || |||||||| ||||| | || |||| ||||||||| Sbjct 36920630 CAACGATTGATCTTCGCCGGAAAACAATTAGAAGACGGAAGGACACTGGCGGATTACAAT 36920689 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 25262 || ||||||||||| || ||||| ||||| | ||| | || || ||| Sbjct 36920690 ATCCAAAAGGAATCAACGCTTCATTTGGTGCTTCGACTTCGCGGCGGG 36920737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410761118061578