Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq6 152 8e-32 seq4 123 4e-23 seq5 93.3 6e-14 >seq6 Length=59463898 Score = 152 bits (168), Expect = 8e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | |||||||| || || || ||||| || |||| | ||| | Sbjct 20998431 ATGCAAATATTTGTGAAGACACTTACTGGGAAGACTATTACCTTAGAAGTGGAAAGCTCT 20998490 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| |||| | ||| || ||||| ||||| || ||||| || || ||||| Sbjct 20998491 GACACAATTGATAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATTCCCCCAGATCAG 20998550 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||||||||||||||| || || || || |||||| |||| || || | |||||| ||| Sbjct 20998551 CAAAGGCTTATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACTTTGGCAGATTACAAT 20998610 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 ||||| |||||||| || |||| | ||| | || | || ||||| Sbjct 20998611 ATTCAGAAAGAATCTACCCTGCACCTTGTTCTTCGCCTCCGTGGTGG 20998657 Score = 149 bits (164), Expect = 9e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || || || || |||||| | ||| ||||| | Sbjct 20998203 ATGCAAATTTTTGTCAAGACCCTTACCGGAAAGACAATAACTTTGGAGGTTGAAAGTTCT 20998262 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 |||||||| |||| | || ||||||||| || ||||| ||||| || || ||||| Sbjct 20998263 GATACAATAGATAATGTGAAGGCGAAAATTCAGGACAAAGAGGGTATTCCTCCAGATCAG 20998322 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| |||||||| || || || || |||||| | || || | | ||||||||| Sbjct 20998323 CAGAGGCTAATTTTTGCCGGCAAGCAGTTGGAGGATGGACGTACTCTGGCTGATTATAAT 20998382 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || ||||| |||||||| |||||||| | | || ||||| || Sbjct 20998383 ATCCAGAAGGAATCTACTTTGCACTTGGTTTTGAGGCTTCGTGGTGGCAT 20998432 Score = 143 bits (158), Expect = 4e-29 Identities = 175/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | ||||| | ||||| || || || || | ||| ||||| || Sbjct 20997746 AATGCAAATTTTTGTCAAGACTTTGACAGGAAAGACCATCACCCTGGAGGTTGAATCATC 20997805 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||||||| |||| | ||| || ||||| ||||| || ||||| || |||||||| Sbjct 20997806 GGATACAATTGATAATGTCAAAGCCAAGATTCAGGATAAGGAGGGTATCCCTCCTGATCA 20997865 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||||||||||||||| || || | |||||| | |||| ||| ||||| || Sbjct 20997866 GCAGAGGCTTATTTTTGCAGGGAAGCAGCTTGAGGATGGAAGAACCCTAGCCGATTACAA 20997925 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || || || ||||| || | |||||||| | || || ||||||| || ||| || Sbjct 20997926 CATACAGAAGGAATCCACCCTTCATTTGGTACTTCGATTGAGAGGTGGAATGCAAATTT 20997984 Score = 129 bits (142), Expect = 9e-25 Identities = 174/240 (73%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596 ||||||||| ||| | ||||| | ||||| || ||||| ||| | ||| | || || Sbjct 20997974 AATGCAAATTTTTGTTAAGACTTTGACAGGAAAGACTATTACTTTGGAGGTAGAGAGTTC 20998033 Query 124597 ATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 | ||||| ||| |||| | ||| || ||||||||||| || ||||| ||||| |||| Sbjct 20998034 A-GATACTATTGATAATGTGAAAGCCAAGATTCAAGATAAGGAGGGTATCCCACCAGATC 20998092 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || |||||||| ||||| || ||||| | || ||| | | || | | ||||||| Sbjct 20998093 AGCAGAGGCTTATCTTTGCTGGTAAACAGCTTGAAGATGGAAGGACTCTTGCCGATTATA 20998152 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 | || ||||| || || || | || ||||||||||| | || || ||||| ||| || Sbjct 20998153 ACATCCAAAAGGAGTCCACACTTCACTTGGTTTTACGGCTTCGTGGGGGTATGCAAATTT 20998212 Score = 127 bits (140), Expect = 3e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| || ||||| || || || || | || |||| | Sbjct 17161673 ATGCAAATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTTGAAGTTGAGAGTTCT 17161732 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || || ||||| ||||| ||||| ||||||||||| Sbjct 17161733 GACACCATTGACAATGTCAAGGCCAAGATCCAAGACAAAGAGGGTATCCCACCTGATCAG 17161792 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| || ||||| |||||||| | || ||| ||||||| || | ||||| || Sbjct 17161793 CAGAGGCTCATCTTTGCTGGAAAACAGCTTGAAGATGGTCGAACCTTGGCTGATTACAAC 17161852 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||| |||||| | || ||||||| ||| | || |||||||| Sbjct 17161853 ATCCAGAAAGAGTCAACTCTCCACCTGGTTTTGCGTCTTCGTGGTGGTAT 17161902 Score = 125 bits (138), Expect = 1e-23 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||||||| | ||||| || || || || || || ||| | ||| | || ||| Sbjct 17145887 ATGCAAATATTTGTGAAGACTCTCACCGGAAAGACCATCACTCTTGAGGTGGAGAGC-TC 17145945 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| || ||| |||| || ||||| || ||||| || || ||||| || || Sbjct 17145946 TGATACCATCGACAATGTAAAGGCTAAGATTCAGGACAAAGAGGGCATTCCACCAGACCA 17146005 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| ||||| || ||||| || ||||| | || ||| | ||||| || | |||||| || Sbjct 17146006 ACAGAGGCTCATCTTTGCTGGCAAACAGCTTGAAGATGGCCGAACTTTGGCAGATTACAA 17146065 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| ||||| || || | |||||||| | ||| | || |||||||| Sbjct 17146066 CATTCAGAAAGAGTCCACCCTCCATTTGGTGCTTCGTCTCCGTGGTGGTAT 17146116 Score = 113 bits (124), Expect = 7e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||||||| | ||||| || || |||||||| || ||| | || |||| || | Sbjct 17161217 ATGCAAATATTTGTGAAGACCCTCACTGGCAAAACCATCACTCTCGAAGTTGAGAGTTCA 17161276 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || ||| | || || |||||||| || ||||| || ||||| || || Sbjct 17161277 -GATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGCATCCCACCAGACCA 17161335 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || | || ||||||||||| || || | |||||| | || || | | ||||| || Sbjct 17161336 GCAGCGTCTCATTTTTGCAGGCAAGCAGCTGGAGGATGGGCGTACCCTTGCTGATTACAA 17161395 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || |||||||| ||||| | |||||||| | ||| | || ||||| || Sbjct 17161396 CATCCAAAAAGAGTCAACCCTTCATTTGGTGCTCCGTCTCCGTGGTGGAAT 17161446 Score = 107 bits (118), Expect = 3e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | ||||| || |||||||||||||| ||| | ||| |||| ||| | Sbjct 17146343 ATGCAGATTTTTGTTAAGACCCTCACAGGCAAAACTATTACTTTGGAGGTTGAGAGCTCA 17146402 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||||| ||| |||| || || || ||||| || ||||| || || || || Sbjct 17146403 -GACACAATCGACAATGTAAAGGCCAAGATACAGGATAAGGAGGGTATTCCCCCAGACCA 17146461 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||| | |||||||| ||||| || | || ||| |||| || | | ||||| || Sbjct 17146462 GCAAAGATTGATTTTTGCTGGAAAGCAGCTTGAAGATGGTCGGACTCTGGCTGATTACAA 17146521 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| || ||||| || ||| | || | ||| | || || | || ||||| Sbjct 17146522 TATCCAGAAAGAGTCCACTCTCCACCTTGTTCTTCGATTGAGGGGAGGTAT 17146572 Score = 107 bits (118), Expect = 3e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| ||||||| | ||||| || || |||||| | ||| | ||| Sbjct 17162129 ATGCAGATCTTTGTAAAGACTTTGACAGGAAAGACCATAACTTTGGAGGTGGAAAGTTCA 17162188 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| ||| |||| ||||||||||| || || || || ||||| ||||| Sbjct 17162189 GACACAATTGACAATGTAAAGGCAAAAATTCAAGACAAGGAGGGAATCCCACCAGATCAG 17162248 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 |||||| | || ||||| || || ||||| |||||| | | || ||| || || || Sbjct 17162249 CAAAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGAAGGACCCTAGCTGACTACAAC 17162308 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 ||||| || || || ||| | || | || || ||| | || ||||| Sbjct 17162309 ATTCAGAAGGAGTCTACTCTTCACCTCGTGTTGCGTCTTCGTGGTGG 17162355 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || ||| | || |||||||| || || | ||| | || Sbjct 20997063 ATGCAAATCTTCGTGAAAACATTGACCGGCAAAACCATCACCCTTGAGGTGGAGAGTTCC 20997122 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || || | ||| || || ||||| || ||||| || ||||| |||||| Sbjct 20997123 GATACCATAGACAACGTGAAAGCTAAGATCCAAGACAAGGAAGGGATCCCACCAGATCAA 20997182 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| ||||| || || || ||||||||||| ||| | || || | | ||||| || Sbjct 20997183 CAAAGACTTATCTTCGCCGGTAAACAATTAGAAGATGGCCGTACCCTTGCTGATTACAAC 20997242 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||||||||| || | ||||| || | || || ||||||| || Sbjct 20997243 ATCCAAAAAGAATCCACCCTTCATTTAGTGCTTCGGTTGAGAGGTGGCAT 20997292 >seq4 Length=49191682 Score = 123 bits (136), Expect = 4e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | ||||| ||||| || || || || ||| | ||| | || Sbjct 19846628 AATGCAGATTTTTGTGAAGACGCTAACGGGGAAGACGATTACTTTGGAGGTGGAGAGTTC 19846569 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| |||| | ||| ||| ||||||||||| || || || ||||| ||||| Sbjct 19846568 TGATACGATTGATAATGTGAAAGCGAAGATTCAAGATAAGGAGGGAATTCCACCGGATCA 19846509 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | ||||||||||| || |||||| | || ||| | || || | | |||||||| Sbjct 19846508 ACAGCGTCTTATTTTTGCTGGTAAACAACTTGAAGATGGACGCACTCTTGCTGATTATAA 19846449 Query 124718 TATTCAAAAAGAATCAAC 124735 |||||| || ||||| || Sbjct 19846448 TATTCAGAAGGAATCTAC 19846431 Score = 109 bits (120), Expect = 8e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | || || ||||| |||||||| ||||| |||| | ||| | Sbjct 19846855 ATGCAGATCTTCGTCAAAACCCTAACCGGCAAAACCATAACGCTAGAAGTAGAATCCTCC 19846796 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| || | ||| ||||| ||||| |||||||| || ||||| ||||| Sbjct 19846795 GACACAATCGACAACGTGAAAGCCAAAATCCAAGACAAAGAAGGAATTCCACCGGATCAG 19846736 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || | || || || |||||||| ||||| || | ||||| | | |||||||||| Sbjct 19846735 CAGCGGTTGATCTTCGCCGGAAAACAGTTAGAAGACGGGAGAACACTTGCAGATTATAAT 19846676 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTT 124748 ||||| ||||| || || | ||| | ||| Sbjct 19846675 ATTCAGAAAGAGTCTACGCTTCATCTTGTT 19846646 Score = 95.1 bits (104), Expect = 2e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | ||||| | || || || || || || | ||| | || ||| Sbjct 14092858 ATGCAGATTTTTGTGAAGACCTTGACTGGGAAGACAATTACCCTTGAGGTGGAGAGCTC- 14092800 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| |||| | || |||||||| |||||||||||||| ||||| || || Sbjct 14092799 TGATACCATTGATAATGTGAAGGCAAAAATTCAGGATAAAGAAGGTATCCCACCGGACCA 14092740 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | || |||||||| || || || |||||| | | || | | ||||| || Sbjct 14092739 GCAGAGGTTGATCTTTGCAGGGAAGCAGTTGGAGGATGGAAGGACCCTTGCTGATTACAA 14092680 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 |||||| || || || || | || | || | ||| | || |||||| Sbjct 14092679 TATTCAGAAGGAGTCCACCCTTCACCTTGTGCTCCGTCTTCGTGGTGGT 14092631 >seq5 Length=48169137 Score = 93.3 bits (102), Expect = 6e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | || || ||||| |||||||| || || ||||| | || Sbjct 36920510 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACCATTACCCTAGAGGTAGAGAGTTCC 36920569 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 |||||||| || | || ||||||||||| || || ||||| || || || || Sbjct 36920570 GATACAATCGACAACGTGAAGGCAAAAATTCAAGACAAGGAGGGTATTCCTCCAGACCAG 36920629 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || || || |||||||||||||| || | | ||| | | ||||| ||| Sbjct 36920630 CAACGATTGATCTTCGCCGGAAAACAATTAGAAGACGGAAGGACACTGGCGGATTACAAT 36920689 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGT 124747 || ||||| |||||||| | |||||||| Sbjct 36920690 ATCCAAAAGGAATCAACGCTTCATTTGGT 36920718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755388698313600