Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq6 118 7e-22 seq4 95.1 8e-15 seq2 87.8 1e-12 >seq6 Length=59463898 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | ||| ||| ||||| ||||||||||||| Sbjct 9515637 CCACCGCGGAGACGGAGGACAAGGTGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGGCG 9515696 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| ||||||||||| || ||||| ||||| ||||| ||||| || Sbjct 9515697 AGAGTGCGGCCGTCTTCCAACTGCTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGTGGA 9515756 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||||| ||| |||||||| | || | | || | |||| || || || Sbjct 9515757 ATTCCTTCCTTGTCTTGGATC-TTTGCTTTGACATTGTCGATTGTGTCGGAAGACTCCAC 9515815 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || || || || |||||||| |||||||||||| Sbjct 9515816 CTCGAGGGTGATCGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATC 9515864 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 ||||| || |||||||| || | || ||| | || |||| |||||||||||| ||| Sbjct 17161407 TCTTTTTGGATGTTGTAATCAGCAAGGGTACGCCCATCCTCCAGCTGCTTGCCTGCAAAA 17161348 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| ||||||||||| || | || |||||||| ||||| ||| | || | Sbjct 17161347 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATCTTGGCCTTAACATTG 17161288 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 |||| | ||| | || || || | |||||||||||||| ||||| || |||||| Sbjct 17161287 TCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTTTTGCCAGTGAGGGTCTTCACA 17161228 Query 34379 AAGATCTGCATC 34390 || || |||||| Sbjct 17161227 AATATTTGCATC 17161216 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| |||||||| || | || ||| | || || | ||| ||||| || || Sbjct 17146077 TCTTTCTGAATGTTGTAATCTGCCAAAGTTCGGCCATCTTCAAGCTGTTTGCCAGCAAAG 17146018 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||||| ||| ||||| || | || ||| ||||| ||||| ||||| || | Sbjct 17146017 ATGAGCCTCTGTTGGTCTGGTGGAATGCCCTCTTTGTCCTGAATCTTAGCCTTTACATTG 17145958 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | || || || | |||||||| || ||||||||||| |||||| Sbjct 17145957 TCGATGGTATCAGAGCTCTCCACCTCAAGAGTGATGGTCTTTCCGGTGAGAGTCTTCACA 17145898 Query 34379 AAGATCTGCATC 34390 || || |||||| Sbjct 17145897 AATATTTGCATC 17145886 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||||| |||| ||| |||||| ||| ||||| || || || || | | Sbjct 20998429 CCACCACGAAGCCTCAAAACCAAGTGCAAAGTAGATTCCTTCTGGATATTATAATCAGCC 20998370 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||||||||||||| || ||||| |||| |||||| || || Sbjct 20998369 AGAGTACGTCCATCCTCCAACTGCTTGCCGGCAAAAATTAGCCTCTGCTGATCTGGAGGA 20998310 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||| ||||| || || ||| | || |||| | ||| | ||| || Sbjct 20998309 ATACCCTCTTTGTCCTGAATTTTCGCCTTCACATTATCTATTGTATCAGAACTTTCAACC 20998250 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || || || || ||||| || || || ||||| || ||||| Sbjct 20998249 TCCAAAGTTATTGTCTTTCCGGTAAGGGTCTTGACAAAAATTTGCAT 20998203 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGG--ACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCG 34255 ||||||||| || ||||| || | | || | ||| | || || | ||| ||||| || Sbjct 17161636 TTCTTTCTGAATATTGTAATCTGCTAAAGTT--CGGCCATCCTCAAGCTGTTTGCCAGCA 17161579 Query 34256 AAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA 34315 |||||||||| ||| ||||| || | |||||||||||| ||||| ||| | | Sbjct 17161578 AAAATGAGCCTCTGTTGGTCTGGTGGAATGCTCTCCTTGTCCTGAATCTTGGCCTTGACA 17161519 Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375 | | | || | ||| | ||| || || | ||||| || || || |||||||| ||| Sbjct 17161518 TTGTCAATAGTATCAGAGCTTTCCACCTCAAGGGTGATCGTCTTTCCAGTGAGAGTCTTC 17161459 Query 34376 ACAAAGATCTGCAT 34389 || ||||| ||||| Sbjct 17161458 ACGAAGATTTGCAT 17161445 >seq4 Length=49191682 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||| || |||| |||| || | |||||| || ||||| Sbjct 14093580 TCCTTCTGGATGTTGTAGTCGGCAAGGGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAG 14093639 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| || |||||||| || | | |||||||| ||||| ||||| | Sbjct 14093640 ATGAGACGTTGCTGGTCCGGAGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTA 14093699 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | || || || | ||||| || ||||||||||| |||||||| Sbjct 14093700 TCGATAGTATCAGAACTCTCTACCTCGAGAGTGATTGTCTTGCCGGTGAGGGTTTTCACG 14093759 Query 34379 AAGATCTGCATC 34390 ||||| |||||| Sbjct 14093760 AAGATTTGCATC 14093771 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | || ||| ||||| | || || ||||| ||||||||||| | Sbjct 14093088 CCACCACGAAGACGCAACACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCT 14093147 Query 34223 A-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 | | || ||| | || || | |||||| || ||||| ||||| | ||||||||| || Sbjct 14093148 AAGGTG-CGGCCATCTTCAAGCTGCTTTCCGGCGAAGATGAGTCTCTGCTGGTCTGGTGG 14093206 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||||| ||||| ||| | | | | || | || | ||| || Sbjct 14093207 GATTCCTTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCAGAGCTTTCAAC 14093266 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| || |||||||| || ||||||||||||||||| Sbjct 14093267 TTCGAGAGTGATGGTCTTACCGGTGAGGGTCTTCACAAAGATCTGCAT 14093314 Score = 82.4 bits (90), Expect = 5e-11 Identities = 137/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| || |||||||||| || ||| |||| || | ||||| || ||||| Sbjct 14093351 TTCCTTCTGGATATTGTAGTCGGCGAGGGTACGACCGTCCTCAAGTTGCTTTCCGGCGAA 14093410 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || || | ||||||||| ||| | | |||||||| ||||| |||||| Sbjct 14093411 GATAAGTCTCTGCTGGTCCGGGGGAATTCCTTCCTTGTCTTGGATCTTG-GCTTTAAC-- 14093467 Query 34318 GGCTATCGAATCGGTCGA----TTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTT 34373 | |||||| |||| |||||| || | |||||||| ||||| ||||| || | Sbjct 14093468 -GTTATCGATGGTGTCGGAGCTTTCGACCTCAAGAGTGATGGTCTTGCCTGTGAGGGTCT 14093526 Query 34374 TCACAAAGATCTGCAT 34389 | || ||||||||||| Sbjct 14093527 TGACGAAGATCTGCAT 14093542 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || ||||| || || || || | ||| |||||||| || || || || | Sbjct 19846628 TCCACCACGGAGCCTAAGAACAAGATGAAGCGTAGACTCTTTCTGAATATTATAATCTGC 19846687 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || | |||| || ||||| || || ||||| || | ||||||||| || || Sbjct 19846688 AAGTGTTCTCCCGTCTTCTAACTGTTTTCCGGCGAAGATCAACCGCTGCTGATCCGGTGG 19846747 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340 | | || ||||| || ||| ||||| | | | | || | |||| ||||| | Sbjct 19846748 AATTCCTTCTTTGTCTTGGAT-TTTGGCTTTCACGTTGTCGATTGTGTCGGAGGATTCTA 19846806 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | ||| |||||||||||||| || ||||| || ||||||||||| Sbjct 19846807 CTTCTAGCGTTATGGTTTTGCCGGTTAGGGTTTTGACGAAGATCTGCAT 19846855 >seq2 Length=36634854 Score = 87.8 bits (96), Expect = 1e-12 Identities = 167/243 (69%), Gaps = 5/243 (2%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| ||| ||||| ||||||||||||| || ||| |||| Sbjct 8273568 AGAACAAGGTGAAGAGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCT 8273509 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | || || || ||||| ||||| || || ||||| || | | |||||||| Sbjct 8273508 TCGAGTTGTTTTCCGGCGAAGATGAGTCGTTGTTGGTCCGGTGGAATCCCTTCCTTGTCT 8273449 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 || ||| ||||| | | | | || | || | ||||| || || | ||||| || Sbjct 8273448 TGGAT-TTTGGCTTTGACGTTGTCGATTGTGTCAGAGGATTCAACCTCGAGGGTGATTGT 8273390 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCA---TCGCTCGAATGGTGCGTGCGCAGAG 34413 ||| || || || |||||||| |||||||||| ||| |||| | | | ||||| ||| Sbjct 8273389 TTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTTCGGTCGATTAGGGTTTGCGCCGAG 8273330 Query 34414 CGA 34416 || Sbjct 8273329 GGA 8273327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323043937865120