Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq55 194 2e-44 seq104 140 3e-28 >seq55 Length=606834 Score = 194 bits (214), Expect = 2e-44 Identities = 587/892 (66%), Gaps = 25/892 (3%) Strand=Plus/Minus Query 15931 CATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTC 15990 |||||| || ||| |||||||| | ||| | ||| ||||| || || || || |||| Sbjct 250556 CATAACAGAAGCTTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTG 250497 Query 15991 TAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACAATAGTA--TTTATCGCAT 16048 | ||||| ||||| ||||||||||||| | ||||| || | ||| | || Sbjct 250496 AAGAGAAATCAACTCCATCCAATCAAAAGGATTCT--GAACATTATAAACTTTCCCACAA 250439 Query 16049 CCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAG 16108 || | || ||| || ||||| || || || || |||||||| |||| ||||||| Sbjct 250438 CCAAGCTCACCCAACAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCA 250379 Query 16109 TTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACC 16168 ||||| || | || || | || || | ||| | | || || | |||| Sbjct 250378 TTCATCCCGACCAACGCGCACGGAAGCGCGTCACAAACAAACTCCCTCTCAATCTCAACC 250319 Query 16169 GCTTCAATGATTATATCTCTT-ACTACACTATTTAACGGAGGGTTTAAT----AAGTGTT 16223 || ||| | | || | |||| ||| | || | | | || |||| | || || Sbjct 250318 GCATCACTCACAATCT-TCTTCACT-CGCTCCTCA-CTCAG--TTTATTCCTCAATAGTG 250264 Query 16224 TAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTG 16283 | | | | |||||||||||||||||| | ||||||||| | || | |||||||| Sbjct 250263 AATAAAGCAAACAAGCAAAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTG 250204 Query 16284 AAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAAC 16343 |||| || | ||| ||||||| || |||||||||| |||||| || || || || Sbjct 250203 AAAAAGTTAAACCAGGCATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTAC 250144 Query 16344 CAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAt 16403 |||| || || ||||||||||| ||||| ||||| | || ||| | ||| | Sbjct 250143 CAGAGAAAAAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAACG----AA 250088 Query 16404 ttttac-tttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTC 16462 | || || |||||||| |||||||| ||||| | || ||| || || Sbjct 250087 TCCGACGAATCGATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTC 250028 Query 16463 TCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGT 16522 || || |||| ||| ||| ||| || || ||| ||||| || || | || Sbjct 250027 TCAATAGCATGAAACAAACGATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGG 249968 Query 16523 AAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCAT-AAAAGCATCT 16581 | |||||||||||| ||||| |||||||| || || || |||||||| | ||||||| | Sbjct 249967 AGACTATACATTTCAGAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCA-CG 249909 Query 16582 AGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCC 16641 || || || | ||| ||||| || ||| | || | || || ||| || || Sbjct 249908 CGCCTCTGAAACTTGAACTTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCC 249849 Query 16642 ATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--TGAA 16699 ||| || || ||||| ||||| | ||| | ||| | | |||| || | || Sbjct 249848 GTCGGATGCGGCGAAAAATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAA 249789 Query 16700 AGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAA 16759 | | || ||| | || ||||| ||||||||| || ||||| | ||||| || || Sbjct 249788 ATTGTT--CCAATGTTGAAGATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAG 249731 Query 16760 GCAACAGCCTTTTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACA 16811 || | || ||||| ||||||| ||| || | ||| |||| || |||| Sbjct 249730 GCTTCGGCTTTTTTGTACATTTCCCAAATTTTAGGGTATTCAATTGGGAACA 249679 Score = 194 bits (214), Expect = 2e-44 Identities = 587/892 (66%), Gaps = 25/892 (3%) Strand=Plus/Minus Query 15931 CATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTC 15990 |||||| || ||| |||||||| | ||| | ||| ||||| || || || || |||| Sbjct 259239 CATAACAGAAGCTTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTG 259180 Query 15991 TAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACAATAGTA--TTTATCGCAT 16048 | ||||| ||||| ||||||||||||| | ||||| || | ||| | || Sbjct 259179 AAGAGAAATCAACTCCATCCAATCAAAAGGATTCT--GAACATTATAAACTTTCCCACAA 259122 Query 16049 CCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAG 16108 || | || ||| || ||||| || || || || |||||||| |||| ||||||| Sbjct 259121 CCAAGCTCACCCAACAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCA 259062 Query 16109 TTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACC 16168 ||||| || | || || | || || | ||| | | || || | |||| Sbjct 259061 TTCATCCCGACCAACGCGCACGGAAGCGCGTCACAAACAAACTCCCTCTCAATCTCAACC 259002 Query 16169 GCTTCAATGATTATATCTCTT-ACTACACTATTTAACGGAGGGTTTAAT----AAGTGTT 16223 || ||| | | || | |||| ||| | || | | | || |||| | || || Sbjct 259001 GCATCACTCACAATCT-TCTTCACT-CGCTCCTCA-CTCAG--TTTATTCCTCAATAGTG 258947 Query 16224 TAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTG 16283 | | | | |||||||||||||||||| | ||||||||| | || | |||||||| Sbjct 258946 AATAAAGCAAACAAGCAAAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTG 258887 Query 16284 AAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAAC 16343 |||| || | ||| ||||||| || |||||||||| |||||| || || || || Sbjct 258886 AAAAAGTTAAACCAGGCATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTAC 258827 Query 16344 CAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAt 16403 |||| || || ||||||||||| ||||| ||||| | || ||| | ||| | Sbjct 258826 CAGAGAAAAAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAACG----AA 258771 Query 16404 ttttac-tttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTC 16462 | || || |||||||| |||||||| ||||| | || ||| || || Sbjct 258770 TCCGACGAATCGATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTC 258711 Query 16463 TCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGT 16522 || || |||| ||| ||| ||| || || ||| ||||| || || | || Sbjct 258710 TCAATAGCATGAAACAAACGATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGG 258651 Query 16523 AAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCAT-AAAAGCATCT 16581 | |||||||||||| ||||| |||||||| || || || |||||||| | ||||||| | Sbjct 258650 AGACTATACATTTCAGAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCA-CG 258592 Query 16582 AGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCC 16641 || || || | ||| ||||| || ||| | || | || || ||| || || Sbjct 258591 CGCCTCTGAAACTTGAACTTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCC 258532 Query 16642 ATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--TGAA 16699 ||| || || ||||| ||||| | ||| | ||| | | |||| || | || Sbjct 258531 GTCGGATGCGGCGAAAAATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAA 258472 Query 16700 AGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAA 16759 | | || ||| | || ||||| ||||||||| || ||||| | ||||| || || Sbjct 258471 ATTGTT--CCAATGTTGAAGATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAG 258414 Query 16760 GCAACAGCCTTTTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACA 16811 || | || ||||| ||||||| ||| || | ||| |||| || |||| Sbjct 258413 GCTTCGGCTTTTTTGTACATTTCCCAAATTTTAGGGTATTCAATTGGGAACA 258362 >seq104 Length=244920 Score = 140 bits (154), Expect = 3e-28 Identities = 257/371 (69%), Gaps = 8/371 (2%) Strand=Plus/Plus Query 16234 ACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAA-CTCGTTTGAAAATGTAA 16292 |||||| ||||||||||| | ||||||||| | || | ||| |||||||||||| || | Sbjct 172066 ACAAGCGAAATCACAATGAAGTCCTTCGTCAC-ACAAAATAAGCTCGTTTGAAAAAGTTA 172124 Query 16293 GACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGA 16352 ||| |||||| || |||||||||| ||||||||| || || || ||| || | Sbjct 172125 AACCATGCATTAAACCACGTTTTTTAAGCCAAAATATCGCACATAAACTACTAGAGAAAA 172184 Query 16353 ATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttacttt 16412 | ||||||||||| ||||| ||||| | || ||| || || | | | Sbjct 172185 AAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCA----ACAATCAAATCGACGAAT 172240 Query 16413 ctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCAT 16472 | |||||||| |||||||| ||||| | || ||| || |||| || |||| Sbjct 172241 CGATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCAT 172300 Query 16473 TAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACA 16532 ||| ||| |||| || || ||| ||||| || || | || | |||||||| Sbjct 172301 GAAACAAACAATTCTTCTCAACCAAATCGCTTATATATGTTTCAAGAAGGAGACTATACA 172360 Query 16533 TTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATA-AAAGCATCTAGCTTCGGAT 16591 |||| ||||| |||||||| || || || || || | || |||||| | ||||| || Sbjct 172361 TTTCAGAATGTATATTCTCAATCGCGATTTGGAACCTGTAGAAAGCA-CGCGCTTCTGAA 172419 Query 16592 ATTTGTACTTC 16602 | ||| ||||| Sbjct 172420 ACTTGAACTTC 172430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462470795962200