Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq6 96.9 3e-15 seq5 96.9 3e-15 >seq6 Length=59463898 Score = 96.9 bits (106), Expect = 3e-15 Identities = 99/128 (77%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 20426 TATGCCAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTG 20485 ||||| | || || || || ||| || || || |||||||||||||||||||| || | Sbjct 58531905 TATGC-AGTTCTATGTGGCAAATGGGGAGTTATCATGTCAAATGTATCAACGATCTGCCG 58531847 Query 20486 ATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTG 20545 | ||||| ||||| || || || ||||||||| ||||||||| | || | ||||||| Sbjct 58531846 ACATGGGCCTGGGCGTGCCATTTAATATTGCATCTTATGCGCTCTTGACATGCATGATTG 58531787 Query 20546 CACATGTT 20553 | |||||| Sbjct 58531786 CTCATGTT 58531779 >seq5 Length=48169137 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || || || || || ||| || || || |||||||||||||| ||||| ||||| ||| Sbjct 30757851 CAGTTCTATGTAGCAAATGGGGAGTTATCATGTCAAATGTATCAGCGATCTGCTGACATG 30757910 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || |||||||| || || ||||||||| |||||| || || || | |||||||| ||| Sbjct 30757911 GGCCTGGGTGTGCCATTTAATATTGCATCTTATGCCCTCCTGACATGCATGATTGCTCAT 30757970 Query 20551 GTT 20553 || Sbjct 30757971 ATT 30757973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399149326753015