Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq5 109 4e-19 seq4 95.1 1e-14 seq6 91.5 1e-13 >seq5 Length=48169137 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || ||||| ||||| || || ||||| || |||| | |||| || Sbjct 36920718 ACCAAATGAAGCGTTGATTCCTTTTGGATATTGTAATCCGCCAGTGTCCTTCCGTCTTCT 36920659 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | ||||||||||||||| ||||| || || ||||| ||||| | |||||||||||| | Sbjct 36920658 AATTGTTTTCCGGCGAAGATCAATCGTTGCTGGTCTGGAGGAATACCCTCCTTGTCTTGA 36920599 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 |||||| ||| || | | | || || ||| ||||| | |||||| || ||| Sbjct 36920598 ATTTTTGCCTTCACGTTGTCGATTGTATCGGAACTCTCTACCTCTAGGGTAATGGTTTTG 36920539 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || || || || ||||| ||||| |||||| || Sbjct 36920538 CCGGTTAGGGTTTTCACGAAGATCTGCATGATG 36920506 >seq4 Length=49191682 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||| || || | | || ||||| || ||||||||||| Sbjct 14092895 CTCCTTCTGGATGTTGTAATCAGCGAGGGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAA 14092954 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 ||||||| ||| || || || || | ||| ||||| ||| || || |||||| Sbjct 14092955 GATCAACCTCTGCTGATCTGGGGGAATACCTTCCTTATCCTGGATCTTGGCCTTAACGTT 14093014 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | |||| || ||||||||| | |||||| || || || || || |||||||| Sbjct 14093015 GTCGATTGTGTCAGAACTCTCCACCTCAAGGGTAATAGTTTTACCAGTGAGGGTCTTCAC 14093074 Query 45325 AAAGATTTGCAT 45336 ||||||||||| Sbjct 14093075 GAAGATTTGCAT 14093086 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| |||||||||||| ||||| || || | | || |||| || Sbjct 14092655 GTGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCAAGGGTCCTTCCATCCTCCAACTG 14092714 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || ||||||| ||| ||||| || || | ||| || || ||| |||||| Sbjct 14092715 CTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCTTCTTTATCCTGAATTTT 14092774 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 | ||| || | | | | || | ||||||||| | |||||| ||||| || || Sbjct 14092775 TGCCTTCACATTATCAATGGTATCAGAGCTCTCCACCTCAAGGGTAATTGTCTTCCCAGT 14092834 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||||||||| || ||||| Sbjct 14092835 CAAGGTCTTCACAAAAATCTGCAT 14092858 >seq6 Length=59463898 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA--GTTGGCGATCGTCGT 45185 ||||| || || ||| ||| |||||||||||||| || || ||| || | || | Sbjct 17146095 ACCAAATGGAGGGTGGACTCTTTCTGAATGTTGTAATCTGCCAAAGTT--CGGCCATCTT 17146038 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCG 45245 | || ||||| || || || || | || ||||||||| || || | ||||| |||||| Sbjct 17146037 CAAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGGTCTGGTGGAATGCCCTCTTTGTCCT 17145978 Query 45246 CAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305 ||| || ||| || | | | | || | ||||||||| | || || |||| Sbjct 17145977 GAATCTTAGCCTTTACATTGTCGATGGTATCAGAGCTCTCCACCTCAAGAGTGATGGTCT 17145918 Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | || || |||||||||||||| |||||||| Sbjct 17145917 TTCCGGTGAGAGTCTTCACAAATATTTGCAT 17145887 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 ||||| | ||| || || ||||||||||||||| ||||| || | | || Sbjct 17147010 AATACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGCAAGGGTCCTTCCATCC 17146951 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| ||| || || || || ||||||| ||| || || || || | || ||||||||| Sbjct 17146950 TCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTGTCC 17146891 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 |||||| || || | | |||| || || ||||||| ||||| ||| Sbjct 17146890 TGTATTTTTGCTTTGACATTATCGATTGTGTCTGAACTTTCTACCTCCAAAGTAATGGTC 17146831 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || |||| ||||||||||||||| ||||| Sbjct 17146830 TTTCCTGTCAAAGTCTTCACAAAGATCTGCAT 17146799 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||||||||||||||| || | | || |||| ||| || || || || Sbjct 17162320 CTCCTTCTGAATGTTGTAGTCAGCTAGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAA 17162261 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 ||||||| || || || || || | ||||||||||| ||||||| ||| || Sbjct 17162260 GATCAACCTTTGCTGATCTGGTGGGATTCCCTCCTTGTCTTGAATTTTTGCCTTTACATT 17162201 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | |||| || |||||||||| || || ||||| || |||| |||||| || Sbjct 17162200 GTCAATTGTGTCTGAACTTTCCACCTCCAAAGTTATGGTCTTTCCTGTCAAAGTCTTTAC 17162141 Query 45325 AAAGATTTGCAT 45336 |||||| ||||| Sbjct 17162140 AAAGATCTGCAT 17162129 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCA--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCG 45202 |||||| ||||||||||| ||| || ||| || | || || || || ||||| || Sbjct 17146306 CTCCTTTTGAATGTTGTAATCGGCCAAGGTT--CGTCCATCTTCAAGCTGCTTTCCAGCA 17146249 Query 45203 AATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACC 45262 || ||||||| || ||||| || || | ||||| ||||| || ||| ||| || Sbjct 17146248 AAAATCAACCTTTGCTGGTCTGGTGGAATGCCCTCTTTGTCTTGTATCTTTGCCTTGACA 17146189 Query 45263 GCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTC 45322 | | | |||| || ||| ||||| | || || ||||| || || || ||||| Sbjct 17146188 TTGTCTATGGTGTCAGAACTCTCTACCTCAAGTGTGATGGTCTTTCCTGTGAGGGTCTTG 17146129 Query 45323 ACAAAGATTTGCAT 45336 |||||||||||||| Sbjct 17146128 ACAAAGATTTGCAT 17146115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395040883644667