Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq55 170 2e-37 seq104 118 1e-21 seq7 93.3 4e-14 >seq55 Length=606834 Score = 170 bits (188), Expect = 2e-37 Identities = 555/854 (65%), Gaps = 15/854 (2%) Strand=Plus/Minus Query 13912 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13971 ||| |||||||| | ||| | || ||||| |||||||| || |||| || || || Sbjct 250544 TTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAA 250485 Query 13972 TTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATA 14030 ||||| ||||||| ||||| | |||| | | ||||| ||||||| || || | Sbjct 250484 CTCCATCCAATCAAAAGGATTC-TGAACATTATAAACTTTCCCACAACCAAGCTCACCCA 250426 Query 14031 GTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 14090 || ||||| |||| |||||||||||| || ||| ||||||| |||||| || | | Sbjct 250425 ACAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCCGACCA 250366 Query 14091 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 14150 |||| | | ||| || | || || || || || | | || Sbjct 250365 ACGCGCACGGAAGCGCGTCACAAACAAACTCCCTCTCAATCTCAACCGCATCACTCACAA 250306 Query 14151 TAATCGTAATAATTTCATTAGAAGGAGGATATT--TTAGATGTTTAAAAATTAAACACGC 14208 | || | | || | | || |||| | | || | ||| ||||| || Sbjct 250305 TCTTCTTCACTCGCTCCT--CACTCAGTTTATTCCTCAATAGTGAATAAAGCAAACAAGC 250248 Query 14209 AAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGG 14268 ||||||||||||||| || || || | |||||| ||||||||||| ||||| || || Sbjct 250247 AAAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAAACCAGG 250188 Query 14269 CATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCC 14328 ||| || || |||||||| | |||||| |||||| ||| || || || || || || Sbjct 250187 CATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACCAGAGAAAAAAATACC 250128 Query 14329 CTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCA 14388 ||||| |||||| || | | || ||| ||||||| | ||| ||||| Sbjct 250127 TTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAACGAATC-CGACGAATCG--ATCCA 250071 Query 14389 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448 ||| |||||| || | ||| || |||| || || || |||||||||| ||| || Sbjct 250070 TTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATGAAACAA 250011 Query 14449 ATGTTCCTTCTCTTTAGTA---CTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 14505 | | | |||||| | | ||| || || || |||| ||| | ||||||||||| Sbjct 250010 ACGATTCTTCTCAACCGAATCGCTT---ATATACGTTTCAAGAAGGAGACTATACATTTC 249954 Query 14506 AGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTG 14565 ||| ||||| || || || || || |||||||| |||||| | || ||||| ||| Sbjct 249953 AGAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCGCCTCTGAAACTTG 249894 Query 14566 TACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAA 14625 || ||| |||||| | || | ||| || ||| || || || || || || Sbjct 249893 AACTTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGCGGCGAA 249834 Query 14626 AAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTTTTTCCAATCGGC 14685 |||||| | | || | ||||| | | || | | | | || ||||||| Sbjct 249833 AAATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCCAATGTTG 249774 Query 14686 TAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATA 14745 | ||| | || | ||| ||||| || | ||||| || || | |||||||| || Sbjct 249773 AAGATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTA 249714 Query 14746 CATTACCCATATTT 14759 |||| |||| |||| Sbjct 249713 CATTTCCCAAATTT 249700 Score = 170 bits (188), Expect = 2e-37 Identities = 555/854 (65%), Gaps = 15/854 (2%) Strand=Plus/Minus Query 13912 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13971 ||| |||||||| | ||| | || ||||| |||||||| || |||| || || || Sbjct 259227 TTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAA 259168 Query 13972 TTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATA 14030 ||||| ||||||| ||||| | |||| | | ||||| ||||||| || || | Sbjct 259167 CTCCATCCAATCAAAAGGATTC-TGAACATTATAAACTTTCCCACAACCAAGCTCACCCA 259109 Query 14031 GTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 14090 || ||||| |||| |||||||||||| || ||| ||||||| |||||| || | | Sbjct 259108 ACAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCCGACCA 259049 Query 14091 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 14150 |||| | | ||| || | || || || || || | | || Sbjct 259048 ACGCGCACGGAAGCGCGTCACAAACAAACTCCCTCTCAATCTCAACCGCATCACTCACAA 258989 Query 14151 TAATCGTAATAATTTCATTAGAAGGAGGATATT--TTAGATGTTTAAAAATTAAACACGC 14208 | || | | || | | || |||| | | || | ||| ||||| || Sbjct 258988 TCTTCTTCACTCGCTCCT--CACTCAGTTTATTCCTCAATAGTGAATAAAGCAAACAAGC 258931 Query 14209 AAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGG 14268 ||||||||||||||| || || || | |||||| ||||||||||| ||||| || || Sbjct 258930 AAAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAAACCAGG 258871 Query 14269 CATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCC 14328 ||| || || |||||||| | |||||| |||||| ||| || || || || || || Sbjct 258870 CATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACCAGAGAAAAAAATACC 258811 Query 14329 CTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCA 14388 ||||| |||||| || | | || ||| ||||||| | ||| ||||| Sbjct 258810 TTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAACGAATC-CGACGAATCG--ATCCA 258754 Query 14389 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448 ||| |||||| || | ||| || |||| || || || |||||||||| ||| || Sbjct 258753 TTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATGAAACAA 258694 Query 14449 ATGTTCCTTCTCTTTAGTA---CTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 14505 | | | |||||| | | ||| || || || |||| ||| | ||||||||||| Sbjct 258693 ACGATTCTTCTCAACCGAATCGCTT---ATATACGTTTCAAGAAGGAGACTATACATTTC 258637 Query 14506 AGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTG 14565 ||| ||||| || || || || || |||||||| |||||| | || ||||| ||| Sbjct 258636 AGAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCGCCTCTGAAACTTG 258577 Query 14566 TACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAA 14625 || ||| |||||| | || | ||| || ||| || || || || || || Sbjct 258576 AACTTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGCGGCGAA 258517 Query 14626 AAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTTTTTCCAATCGGC 14685 |||||| | | || | ||||| | | || | | | | || ||||||| Sbjct 258516 AAATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCCAATGTTG 258457 Query 14686 TAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATA 14745 | ||| | || | ||| ||||| || | ||||| || || | |||||||| || Sbjct 258456 AAGATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTA 258397 Query 14746 CATTACCCATATTT 14759 |||| |||| |||| Sbjct 258396 CATTTCCCAAATTT 258383 >seq104 Length=244920 Score = 118 bits (130), Expect = 1e-21 Identities = 253/375 (67%), Gaps = 10/375 (3%) Strand=Plus/Plus Query 14201 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 14260 ||||| || |||||||||||||| || || || | |||||| ||||||||||| ||| Sbjct 172064 AAACAAGCGAAATCACAATGAAGTCCTTCGTCACACAAAATAAGCTCGTTTGAAAAAGTT 172123 Query 14261 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 14320 || || |||| || || |||||||| | ||||||||| ||| || | || || Sbjct 172124 AAACCATGCATTAAACCACGTTTTTTAAGCCAAAATATCGCACATAAACTACTAGAGAAA 172183 Query 14321 AATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTC 14380 || || || ||||| |||||| || | | || ||| ||| | | | || Sbjct 172184 AAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAACAATCAA--ATCGACGAATC 172241 Query 14381 GATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCA 14440 | |||||||| |||||| || | ||| || |||| || || || ||||||||| Sbjct 172242 G--ATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCA 172299 Query 14441 TTAAATAAATGTTCCTTCT---CTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14497 | ||| ||| | ||||| | | ||| || ||||| |||| ||| | ||| Sbjct 172300 TGAAACAAACAATTCTTCTCAACCAAATCGCTT---ATATATGTTTCAAGAAGGAGACTA 172356 Query 14498 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14557 ||||||||||| ||||| || || || || || || || | || ||| | |||||| Sbjct 172357 TACATTTCAGAATGTATATTCTCAATCGCGATTTGGAACCTGTAGAAAGCACGCGCTTCT 172416 Query 14558 GACCATTGTACCTCT 14572 || ||| || ||| Sbjct 172417 GAAACTTGAACTTCT 172431 >seq7 Length=48961560 Score = 93.3 bits (102), Expect = 4e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 14204 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 14263 || ||||||||||| ||||| || ||||||||| || || || ||||| ||||| || Sbjct 5781756 CAAGCAAAATCACAGTGAAGACCTTCATCTCTAGAGATGAGCTCATTTGAGAATGTCAAA 5781697 Query 14264 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 14302 |||||||||||||||| ||||| | ||| ||||| ||| Sbjct 5781696 CCTGGCATCAATCCTCTCTTTTTAAGCCAGAATATGGCA 5781658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482302629036360