Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq6 91.5 1e-13 seq5 89.7 4e-13 >seq6 Length=59463898 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24831 CATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAG 24890 |||||||||||| ||||| ||||| ||||| ||||| || ||| | || || |||||| Sbjct 20997290 CATGCAGATATTCGTTAAGACCTTGACCGGAAAAACCATCACCCTTGAGGTTGAATCGTC 20997349 Query 24891 CGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCA 24950 || | | || | ||| |||| || || | ||||| || | || ||| || Sbjct 20997350 TGATACGATTGATAATGTCAAGGCCAAGATCCAGGACAAAGAGGGTATCCCTCCTGATCA 20997409 Query 24951 GCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAG 25010 ||| | | || | ||| || |||||||| || ||| | || | ||||||| Sbjct 20997410 GCAGAGGCTTATCTTTGCAGGGAAACAACTTGAGGATGGTAGAACCCTAGCTGATTACAA 20997469 Query 25011 CATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 ||| ||||||||| | || |||||||| ||| | |||||| | || || Sbjct 20997470 CATCCAGAAAGAGTCTACCCTTCATTTGGTGCTTCGATTGAGAGGTGG 20997517 >seq5 Length=48169137 Score = 89.7 bits (98), Expect = 4e-13 Identities = 161/234 (69%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 24828 CATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATC 24887 |||||||||||| || || |||||| ||||||||||||| || ||| | || || || Sbjct 36920506 CATCATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACCATTACCCTAGAGGTAGA--- 36920562 Query 24888 GAG---CGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGT 24944 ||| ||| | | || | || |||| ||||||| | || || || | || Sbjct 36920563 GAGTTCCGATACAATCGACAACGTGAAGGCAAAAATTCAAGACAAGGAGGGTATTCCTCC 36920622 Query 24945 TGACCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGA 25004 ||||||||||| || || | || || |||||| | ||||| | ||| || || Sbjct 36920623 AGACCAGCAACGATTGATCTTCGCCGGAAAACAATTAGAAGACGGAAGGACACTGGCGGA 36920682 Query 25005 TTACAGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 ||||| || || || || | ||||||||||| ||| | ||| | ||||| || Sbjct 36920683 TTACAATATCCAAAAGGAATCAACGCTTCATTTGGTGCTTCGACTTCGCGGCGG 36920736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418267665983840