Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq55 212 8e-50 seq104 123 3e-23 >seq55 Length=606834 Score = 212 bits (234), Expect = 8e-50 Identities = 588/897 (66%), Gaps = 6/897 (1%) Strand=Plus/Minus Query 33290 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 33349 ||| || ||||| || || || || || ||||| ||||| || |||| | || || Sbjct 250544 TTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAA 250485 Query 33350 TTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAAT 33409 ||||| ||||||| ||||| |||||| |||| ||| | | || | ||| | Sbjct 250484 CTCCATCCAATCAAAAGGATTCTGAACATTATAAACTTTCCCACAACCAAGCTCACCCAA 250425 Query 33410 CAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAG 33469 ||| ||||| || ||||| || ||||| |||||| |||| |||||| || | | Sbjct 250424 CAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCCGACCAA 250365 Query 33470 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529 ||||| || || || ||| || ||||| ||||||| | | ||| Sbjct 250364 CGCGCACGGAAGCGCGTCACAAACAAACTCCCTCTCAATCTCAACCGCATCACTCACAAT 250305 Query 33530 AAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAA-ACATCAAACATGCGA 33588 | || || |||||| || || | | ||| | || | | |||||| || | Sbjct 250304 CTTCTTCACTCGCTCCTCACTCAGTTTAT-TCCTCAATAGTGAATAAAGCAAACAAGCAA 250246 Query 33589 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCA 33648 |||| || || || || ||||| | ||| | ||||| ||||| || | || |||| Sbjct 250245 AATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAAACCAGGCA 250186 Query 33649 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTT 33708 ||| ||||| |||||||||||||| || | | ||| || || || || || |||| Sbjct 250185 TTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACCAGAGAAAAAAATACCTT 250126 Query 33709 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTC--ATGTATCCACTT 33766 | || |||||| |||| | ||| || | || || | | | || ||||| || Sbjct 250125 CAACGCAAGCAAAAGCAACGATTCTTTCAGC--AAACGAATCCGACGAATCGATCCATTT 250068 Query 33767 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33826 ||||||||| || ||||| | |||||| ||||| || || |||| ||| | | Sbjct 250067 CAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATGAAACAAACG 250008 Query 33827 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 33886 || || ||| ||| | | ||| || || | | |||||||||||||| ||||| Sbjct 250007 ATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGGAGACTATACATTTCAGAATG 249948 Query 33887 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC 33946 || || ||||| || || ||||| ||||| ||| | ||||| | || || ||||| Sbjct 249947 TATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCGCCTCTGAAACTTGAACTTC 249888 Query 33947 TGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGC 34006 | | |||| | | || | ||| || || || || || || || ||||| || Sbjct 249887 TTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGCGGCGAAAAATGC 249828 Query 34007 CAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATC 34066 | || || || ||| | | |||| | |||| || ||||||| | | ||| Sbjct 249827 AAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCCAATGTTGAAGATC 249768 Query 34067 TTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATT 34126 || |||| ||| |||||||| | ||||| ||||| || || || ||||| ||||| | Sbjct 249767 TTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACATTTC 249708 Query 34127 CCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAG 34183 ||| || | | | |||| |||||||| ||| ||| | | ||| ||||| ||||| Sbjct 249707 CCAAATTTTAGGGTATTCAATTGGGAACATACAAAAACGGTCTGGGTTTGGAGCAAG 249651 Score = 212 bits (234), Expect = 8e-50 Identities = 588/897 (66%), Gaps = 6/897 (1%) Strand=Plus/Minus Query 33290 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 33349 ||| || ||||| || || || || || ||||| ||||| || |||| | || || Sbjct 259227 TTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAA 259168 Query 33350 TTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAAT 33409 ||||| ||||||| ||||| |||||| |||| ||| | | || | ||| | Sbjct 259167 CTCCATCCAATCAAAAGGATTCTGAACATTATAAACTTTCCCACAACCAAGCTCACCCAA 259108 Query 33410 CAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAG 33469 ||| ||||| || ||||| || ||||| |||||| |||| |||||| || | | Sbjct 259107 CAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCCGACCAA 259048 Query 33470 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529 ||||| || || || ||| || ||||| ||||||| | | ||| Sbjct 259047 CGCGCACGGAAGCGCGTCACAAACAAACTCCCTCTCAATCTCAACCGCATCACTCACAAT 258988 Query 33530 AAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAA-ACATCAAACATGCGA 33588 | || || |||||| || || | | ||| | || | | |||||| || | Sbjct 258987 CTTCTTCACTCGCTCCTCACTCAGTTTAT-TCCTCAATAGTGAATAAAGCAAACAAGCAA 258929 Query 33589 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCA 33648 |||| || || || || ||||| | ||| | ||||| ||||| || | || |||| Sbjct 258928 AATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAAACCAGGCA 258869 Query 33649 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTT 33708 ||| ||||| |||||||||||||| || | | ||| || || || || || |||| Sbjct 258868 TTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACCAGAGAAAAAAATACCTT 258809 Query 33709 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTC--ATGTATCCACTT 33766 | || |||||| |||| | ||| || | || || | | | || ||||| || Sbjct 258808 CAACGCAAGCAAAAGCAACGATTCTTTCAGC--AAACGAATCCGACGAATCGATCCATTT 258751 Query 33767 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33826 ||||||||| || ||||| | |||||| ||||| || || |||| ||| | | Sbjct 258750 CAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATGAAACAAACG 258691 Query 33827 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 33886 || || ||| ||| | | ||| || || | | |||||||||||||| ||||| Sbjct 258690 ATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGGAGACTATACATTTCAGAATG 258631 Query 33887 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC 33946 || || ||||| || || ||||| ||||| ||| | ||||| | || || ||||| Sbjct 258630 TATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCGCCTCTGAAACTTGAACTTC 258571 Query 33947 TGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGC 34006 | | |||| | | || | ||| || || || || || || || ||||| || Sbjct 258570 TTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGCGGCGAAAAATGC 258511 Query 34007 CAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATC 34066 | || || || ||| | | |||| | |||| || ||||||| | | ||| Sbjct 258510 AAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCCAATGTTGAAGATC 258451 Query 34067 TTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATT 34126 || |||| ||| |||||||| | ||||| ||||| || || || ||||| ||||| | Sbjct 258450 TTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACATTTC 258391 Query 34127 CCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAG 34183 ||| || | | | |||| |||||||| ||| ||| | | ||| ||||| ||||| Sbjct 258390 CCAAATTTTAGGGTATTCAATTGGGAACATACAAAAACGGTCTGGGTTTGGAGCAAG 258334 >seq104 Length=244920 Score = 123 bits (136), Expect = 3e-23 Identities = 237/346 (68%), Gaps = 9/346 (3%) Strand=Plus/Plus Query 33579 AAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAAT-TCGTTAGAAAACGT 33637 ||||| |||||||| || || || || ||||| | || || ||| ||||| ||||| || Sbjct 172064 AAACAAGCGAAATCACAATGAAGTCCTTCGTCAC-ACAAAATAAGCTCGTTTGAAAAAGT 172122 Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697 | || |||||| ||||| ||||||||||||||||| | | || | || || Sbjct 172123 TAAACCATGCATTAAACCACGTTTTTTAAGCCAAAATATCGCACATAAACTACTAGAGAA 172182 Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCAT---AACCGGCGCTGTC 33754 || || ||||| || |||||| |||| | ||| || || || || || Sbjct 172183 AAAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAACAATCAAATCGACGA---- 172238 Query 33755 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33814 || ||||| || ||||||||| || ||||| | |||||| ||||| || || || Sbjct 172239 ATCGATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGC 172298 Query 33815 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33874 || ||| | | | || || ||| ||| | | ||| || || | | |||||||| Sbjct 172299 ATGAAACAAACAATTCTTCTCAACCAAATCGCTTATATATGTTTCAAGAAGGAGACTATA 172358 Query 33875 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 33920 |||||| ||||| || || ||||| || || || || | ||||||| Sbjct 172359 CATTTCAGAATGTATATTCTCAATCGCGATTTGGAACCTGTAGAAA 172404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629761491124560