Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq55 224 1e-53 seq104 145 1e-29 seq6 100 4e-16 seq5 100 4e-16 >seq55 Length=606834 Score = 224 bits (248), Expect = 1e-53 Identities = 581/877 (66%), Gaps = 9/877 (1%) Strand=Plus/Minus Query 35866 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATT 35925 ||| || ||||| || || || || || ||||| ||||| || |||| | || || Sbjct 250544 TTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAA 250485 Query 35926 TTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAAT 35985 ||||| |||| || ||||| ||||||||||| ||| | | || | ||| | Sbjct 250484 CTCCATCCAATCAAAAGGATTCTGAACATTATAAACTTTCCCACAACCAAGCTCACCCAA 250425 Query 35986 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT-AA 36044 ||| ||||| || || || || ||||| |||||| |||| |||||| || | || Sbjct 250424 CAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCCGACCAA 250365 Query 36045 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 36104 || ||||| || || || ||| || ||||| ||||| || | | || Sbjct 250364 CGCGCAC-GGAAGCGCGTCACAAACAAACTCCCTCTCAATCTCAACCGCATCACTCACAA 250306 Query 36105 TAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 36164 | | ||| || |||||| || || | || || | | | |||||| || | Sbjct 250305 TCTTCTTCACTCGCTCCTCACTCAGTTTATTCCTCAATAGTGAATAAAGCAAACAAGCAA 250246 Query 36165 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 36224 |||| || || || || ||||| | ||| | ||||| ||||| || | || |||| Sbjct 250245 AATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAAACCAGGCA 250186 Query 36225 TTAGGCCACGCTTTTTAAGCCAAAATATGG-ACGCAAATGATCCAGAAAAGAAAATTCCT 36283 ||| ||||| |||||||||||||| || | || ||| | ||||| || ||||| ||| Sbjct 250185 TTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTA-CCAGAGAAAAAAATACCT 250127 Query 36284 TCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTC--ATGTATCCACT 36341 || || ||||| |||| | ||| || || | || | | | || ||||| | Sbjct 250126 TCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAA--CGAATCCGACGAATCGATCCATT 250069 Query 36342 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGAT 36401 | ||||||||| || ||||| | |||||| || ||||| ||||||| ||| | | Sbjct 250068 TCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATGAAACAAAC 250009 Query 36402 AGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAAT 36461 || || ||| ||| | | ||| || |||| | |||||||||||||| |||| Sbjct 250008 GATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGGAGACTATACATTTCAGAAT 249949 Query 36462 GAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 36521 | || || ||||| || |||||||| ||||| ||| | ||||| | || || |||| Sbjct 249948 GTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCGCCTCTGAAACTTGAACTT 249889 Query 36522 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 36581 || | |||| | | || | ||| || || || ||||| || || ||||| | Sbjct 249888 CTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGCGGCGAAAAATG 249829 Query 36582 CCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATAT 36641 | | || || || ||| | | |||| |||| || ||||||| | | || Sbjct 249828 CAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCCAATGTTGAAGAT 249769 Query 36642 CTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATAT 36701 ||| |||| ||| |||||||| | ||||| ||||| || || || ||||| ||||| | Sbjct 249768 CTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACATTT 249709 Query 36702 TCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 ||| || | | | |||| |||||| || || ||||| Sbjct 249708 CCCAAATTTTAGGGTATTCAATTGGGAACAT-ACAAA 249673 Score = 224 bits (248), Expect = 1e-53 Identities = 581/877 (66%), Gaps = 9/877 (1%) Strand=Plus/Minus Query 35866 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATT 35925 ||| || ||||| || || || || || ||||| ||||| || |||| | || || Sbjct 259227 TTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAA 259168 Query 35926 TTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAAT 35985 ||||| |||| || ||||| ||||||||||| ||| | | || | ||| | Sbjct 259167 CTCCATCCAATCAAAAGGATTCTGAACATTATAAACTTTCCCACAACCAAGCTCACCCAA 259108 Query 35986 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT-AA 36044 ||| ||||| || || || || ||||| |||||| |||| |||||| || | || Sbjct 259107 CAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCCGACCAA 259048 Query 36045 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 36104 || ||||| || || || ||| || ||||| ||||| || | | || Sbjct 259047 CGCGCAC-GGAAGCGCGTCACAAACAAACTCCCTCTCAATCTCAACCGCATCACTCACAA 258989 Query 36105 TAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 36164 | | ||| || |||||| || || | || || | | | |||||| || | Sbjct 258988 TCTTCTTCACTCGCTCCTCACTCAGTTTATTCCTCAATAGTGAATAAAGCAAACAAGCAA 258929 Query 36165 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 36224 |||| || || || || ||||| | ||| | ||||| ||||| || | || |||| Sbjct 258928 AATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAAACCAGGCA 258869 Query 36225 TTAGGCCACGCTTTTTAAGCCAAAATATGG-ACGCAAATGATCCAGAAAAGAAAATTCCT 36283 ||| ||||| |||||||||||||| || | || ||| | ||||| || ||||| ||| Sbjct 258868 TTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTA-CCAGAGAAAAAAATACCT 258810 Query 36284 TCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTC--ATGTATCCACT 36341 || || ||||| |||| | ||| || || | || | | | || ||||| | Sbjct 258809 TCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAA--CGAATCCGACGAATCGATCCATT 258752 Query 36342 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGAT 36401 | ||||||||| || ||||| | |||||| || ||||| ||||||| ||| | | Sbjct 258751 TCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATGAAACAAAC 258692 Query 36402 AGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAAT 36461 || || ||| ||| | | ||| || |||| | |||||||||||||| |||| Sbjct 258691 GATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGGAGACTATACATTTCAGAAT 258632 Query 36462 GAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 36521 | || || ||||| || |||||||| ||||| ||| | ||||| | || || |||| Sbjct 258631 GTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCGCCTCTGAAACTTGAACTT 258572 Query 36522 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 36581 || | |||| | | || | ||| || || || ||||| || || ||||| | Sbjct 258571 CTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGCGGCGAAAAATG 258512 Query 36582 CCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATAT 36641 | | || || || ||| | | |||| |||| || ||||||| | | || Sbjct 258511 CAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCCAATGTTGAAGAT 258452 Query 36642 CTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATAT 36701 ||| |||| ||| |||||||| | ||||| ||||| || || || ||||| ||||| | Sbjct 258451 CTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACATTT 258392 Query 36702 TCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 ||| || | | | |||| |||||| || || ||||| Sbjct 258391 CCCAAATTTTAGGGTATTCAATTGGGAACAT-ACAAA 258356 >seq104 Length=244920 Score = 145 bits (160), Expect = 1e-29 Identities = 244/347 (70%), Gaps = 11/347 (3%) Strand=Plus/Plus Query 36155 AAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT-TCGTTGGAAAACGT 36213 ||||| |||||||| || || || || ||||| | || || ||| ||||| ||||| || Sbjct 172064 AAACAAGCGAAATCACAATGAAGTCCTTCGTCAC-ACAAAATAAGCTCGTTTGAAAAAGT 172122 Query 36214 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGG-ACGCAAATGATCCAGAAA 36272 | || |||||| ||||| ||||||||||||||||| | || ||| | | ||| | Sbjct 172123 TAAACCATGCATTAAACCACGTTTTTTAAGCCAAAATATCGCACATAAACTA-CTAGAGA 172181 Query 36273 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCAT---AACCGGCACTGT 36329 | ||||| ||||| || ||||| |||| | ||| || || || || | Sbjct 172182 AAAAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAACAATCAAATCGACGA--- 172238 Query 36330 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 36389 || ||||| || ||||||||| || ||||| | |||||| || ||||| |||| Sbjct 172239 -ATCGATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAG 172297 Query 36390 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 36449 ||| ||| | | | || || ||| ||| | | |||||| |||| | ||||||| Sbjct 172298 CATGAAACAAACAATTCTTCTCAACCAAATCGCTTATATATGTTTCAAGAAGGAGACTAT 172357 Query 36450 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAA 36496 ||||||| ||||| || || ||||| || ||||| || | ||||||| Sbjct 172358 ACATTTCAGAATGTATATTCTCAATCGCGATTTGGAACCTGTAGAAA 172404 >seq6 Length=59463898 Score = 100 bits (110), Expect = 4e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274 ||| |||||||| | || | || |||| |||| | || | | |||||||| |||||| Sbjct 7426929 TCCACCCTGATCAACATAGCGGGCAGTGTCATTAAACACACGGAGCATTGGAACAATACC 7426870 Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGA 66334 ||| ||||| ||||| || || || || || ||| |||||| || ||| || || Sbjct 7426869 ATTAGATGTCCCATTTGTTCCTCGAATGTAACTACCATGTGCACGTATGTTATGAACAGA 7426810 Query 66335 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394 | ||| ||||| ||||| |||| || | || || || || |||||||| || Sbjct 7426809 AACACCAATTCCTCCTGCAGATTTACTAATAACAGCACACTCCTTCAAAGTATCATAAAT 7426750 Query 66395 GCCCTCTATACTATCATCCATCATG 66419 ||||| ||||||||||| ||||| Sbjct 7426749 CCCCTCAATACTATCATCTTTCATG 7426725 >seq5 Length=48169137 Score = 100 bits (110), Expect = 4e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274 ||| |||||||| | || | || |||| |||| | || | || |||||||| |||||| Sbjct 35185794 TCCACCCTGATCAACATAGCGGGCAGTGTCATTAAACACACGCAGCATTGGAACAATACC 35185735 Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGA 66334 ||| || || ||||| || || || || || ||| ||||| || ||| ||| || Sbjct 35185734 ATTAGACGTCCCATTTGTTCCACGAATGTAACTACCATGGGCACGTATGTTATGAATAGA 35185675 Query 66335 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394 | ||| ||||| ||||| |||| || | || || || || |||||||| || Sbjct 35185674 AACACCAATTCCTCCTGCAGATTTACTAATAATAGCACACTCCTTCAATGTATCATAAAT 35185615 Query 66395 GCCCTCTATACTATCATCCATCATG 66419 ||||| ||||||||||| ||||| Sbjct 35185614 CCCCTCAATACTATCATCTTTCATG 35185590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658114165030680