Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq55 242 5e-59 seq104 129 8e-25 seq5 102 1e-16 seq6 93.3 6e-14 >seq55 Length=606834 Score = 242 bits (268), Expect = 5e-59 Identities = 598/898 (67%), Gaps = 8/898 (1%) Strand=Plus/Minus Query 49668 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 49727 ||| || ||||| || || || || || ||||| ||||| || |||| | || || Sbjct 250544 TTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAA 250485 Query 49728 TTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 49787 ||||| ||||||| ||||| ||||||||||| ||| | | || | ||| | Sbjct 250484 CTCCATCCAATCAAAAGGATTCTGAACATTATAAACTTTCCCACAACCAAGCTCACCCAA 250425 Query 49788 CAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT-AA 49846 ||| ||||| || || || || ||||| |||||| |||| |||||| || | || Sbjct 250424 CAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCCGACCAA 250365 Query 49847 GTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 49906 || ||||| || || || ||| || ||||| |||||||| | | || Sbjct 250364 CGCGCAC-GGAAGCGCGTCACAAACAAACTCCCTCTCAATCTCAACCGCATCACTCACAA 250306 Query 49907 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 49966 | | || || |||||| || || | || || | | | |||||| || | Sbjct 250305 TCTTCTTCACTCGCTCCTCACTCAGTTTATTCCTCAATAGTGAATAAAGCAAACAAGCAA 250246 Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026 |||| || || || || ||||| | ||| || ||||| ||||| || | || |||| Sbjct 250245 AATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAAACCAGGCA 250186 Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGG-ACGCAAATGACCCAGAAAAGAAGATTCCT 50085 ||| ||||| |||||||||||||| || | || ||| ||| ||| || || || ||| Sbjct 250185 TTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACC-AGAGAAAAAAATACCT 250127 Query 50086 TCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTC--ATGTATCCACT 50143 || || ||||| ||||| | ||| || || ||| | | | | || ||||| | Sbjct 250126 TCAACGCAAGCAAAAGCAACGATTCTTTCAGCA-AAC-GAATCCGACGAATCGATCCATT 250069 Query 50144 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 50203 | ||||||||| || ||||| | |||||| ||||| || || |||| ||| | | Sbjct 250068 TCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATGAAACAAAC 250009 Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263 || || ||| ||| | | ||| || || | | |||||||||||||| |||| Sbjct 250008 GATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGGAGACTATACATTTCAGAAT 249949 Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323 | || || ||||| || || ||||| ||||| ||| | ||||| | || || |||| Sbjct 249948 GTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCGCCTCTGAAACTTGAACTT 249889 Query 50324 CTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 50383 || | |||| | |||| | ||| || || || ||||| || || ||||| | Sbjct 249888 CTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGCGGCGAAAAATG 249829 Query 50384 CCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATAT 50443 | | || || || ||| ||| |||| | |||| || ||||||| | | || Sbjct 249828 CAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCCAATGTTGAAGAT 249769 Query 50444 CTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATAT 50503 ||| |||| ||| |||||||| | ||||| ||||| || || || ||||| ||||| | Sbjct 249768 CTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACATTT 249709 Query 50504 TCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAG 50561 ||| || | | | |||| |||||||| ||| ||| | | ||| ||||| ||||| Sbjct 249708 CCCAAATTTTAGGGTATTCAATTGGGAACATACAAAAACGGTCTGGGTTTGGAGCAAG 249651 Score = 242 bits (268), Expect = 5e-59 Identities = 598/898 (67%), Gaps = 8/898 (1%) Strand=Plus/Minus Query 49668 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 49727 ||| || ||||| || || || || || ||||| ||||| || |||| | || || Sbjct 259227 TTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAA 259168 Query 49728 TTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 49787 ||||| ||||||| ||||| ||||||||||| ||| | | || | ||| | Sbjct 259167 CTCCATCCAATCAAAAGGATTCTGAACATTATAAACTTTCCCACAACCAAGCTCACCCAA 259108 Query 49788 CAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT-AA 49846 ||| ||||| || || || || ||||| |||||| |||| |||||| || | || Sbjct 259107 CAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCCGACCAA 259048 Query 49847 GTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 49906 || ||||| || || || ||| || ||||| |||||||| | | || Sbjct 259047 CGCGCAC-GGAAGCGCGTCACAAACAAACTCCCTCTCAATCTCAACCGCATCACTCACAA 258989 Query 49907 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 49966 | | || || |||||| || || | || || | | | |||||| || | Sbjct 258988 TCTTCTTCACTCGCTCCTCACTCAGTTTATTCCTCAATAGTGAATAAAGCAAACAAGCAA 258929 Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026 |||| || || || || ||||| | ||| || ||||| ||||| || | || |||| Sbjct 258928 AATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAAACCAGGCA 258869 Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGG-ACGCAAATGACCCAGAAAAGAAGATTCCT 50085 ||| ||||| |||||||||||||| || | || ||| ||| ||| || || || ||| Sbjct 258868 TTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACC-AGAGAAAAAAATACCT 258810 Query 50086 TCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTC--ATGTATCCACT 50143 || || ||||| ||||| | ||| || || ||| | | | | || ||||| | Sbjct 258809 TCAACGCAAGCAAAAGCAACGATTCTTTCAGCA-AAC-GAATCCGACGAATCGATCCATT 258752 Query 50144 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 50203 | ||||||||| || ||||| | |||||| ||||| || || |||| ||| | | Sbjct 258751 TCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATGAAACAAAC 258692 Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263 || || ||| ||| | | ||| || || | | |||||||||||||| |||| Sbjct 258691 GATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGGAGACTATACATTTCAGAAT 258632 Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323 | || || ||||| || || ||||| ||||| ||| | ||||| | || || |||| Sbjct 258631 GTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCGCCTCTGAAACTTGAACTT 258572 Query 50324 CTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 50383 || | |||| | |||| | ||| || || || ||||| || || ||||| | Sbjct 258571 CTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGCGGCGAAAAATG 258512 Query 50384 CCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATAT 50443 | | || || || ||| ||| |||| | |||| || ||||||| | | || Sbjct 258511 CAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCCAATGTTGAAGAT 258452 Query 50444 CTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATAT 50503 ||| |||| ||| |||||||| | ||||| ||||| || || || ||||| ||||| | Sbjct 258451 CTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACATTT 258392 Query 50504 TCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAG 50561 ||| || | | | |||| |||||||| ||| ||| | | ||| ||||| ||||| Sbjct 258391 CCCAAATTTTAGGGTATTCAATTGGGAACATACAAAAACGGTCTGGGTTTGGAGCAAG 258334 >seq104 Length=244920 Score = 129 bits (142), Expect = 8e-25 Identities = 239/345 (69%), Gaps = 7/345 (2%) Strand=Plus/Plus Query 49957 AAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTG 50016 ||||| |||||||| || || || || ||||| | ||| || ||||| ||||| || Sbjct 172064 AAACAAGCGAAATCACAATGAAGTCCTTCGTCACACAAAATAAGCTCGTTTGAAAAAGTT 172123 Query 50017 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGG-ACGCAAATGACCCAGAAAA 50075 | || |||||| ||||| ||||||||||||||||| | || ||| || ||| || Sbjct 172124 AAACCATGCATTAAACCACGTTTTTTAAGCCAAAATATCGCACATAAACTACT-AGAGAA 172182 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCAT--AACTGGCGCTGTCA 50133 || || ||||| || ||||| ||||| | ||| || || || | || | | Sbjct 172183 AAAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAACAATCAAAT--CGACGA-A 172239 Query 50134 TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCA 50193 | ||||| || ||||||||| || ||||| | |||||| ||||| || || ||| Sbjct 172240 TCGATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCA 172299 Query 50194 TTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATAC 50253 | ||| | | | || || ||| ||| | | ||| || || | | ||||||||| Sbjct 172300 TGAAACAAACAATTCTTCTCAACCAAATCGCTTATATATGTTTCAAGAAGGAGACTATAC 172359 Query 50254 ATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 50298 ||||| ||||| || || ||||| || || || || | ||||||| Sbjct 172360 ATTTCAGAATGTATATTCTCAATCGCGATTTGGAACCTGTAGAAA 172404 >seq5 Length=48169137 Score = 102 bits (112), Expect = 1e-16 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 80335 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 80394 || || ||||| || | || || |||||||| || |||||| ||| ||||| || | Sbjct 35185462 GTCCCAGCATTGAAAAGAGTTGGCGAAGCGTGAGTGAACCATCTTTGAGACATTAAGTGA 35185403 Query 80395 TACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAAC 80454 || || | || ||| ||||||||||| | ||||||||| || | || | ||| ||| Sbjct 35185402 TAAGTTTTAACAGCAGATTCTATATCATCCTTATGAATTCCAACAGAAACCCTCATCAAC 35185343 Query 80455 ATGTGCTGAGGTCTTTCAACGATCTTGTTATT-TATTTTCAACAAGTAAGATTTTTCCAA 80513 || |||||||| ||||| || | ||| | || | |||||||| |||||| | || | Sbjct 35185342 ATATGCTGAGGCCTTTCCAC-AACTTTTCCTTGAACTTTCAACAGATAAGATCTCTCTAG 35185284 Query 80514 AGTTTTAAAACCAAAATA 80531 ||||| || ||||| || Sbjct 35185283 GGTTTTGAATCCAAAGTA 35185266 >seq6 Length=59463898 Score = 93.3 bits (102), Expect = 6e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 80335 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 80394 || || ||||| || | || |||||||| || || ||||| | | ||||| || | Sbjct 7426602 GTCCCAGCATTGAAAAGAGTTGGAGAAGCATGAGTGAACCACCTCTGAGACATTAAGTGA 7426543 Query 80395 TACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAAC 80454 || || | || ||| ||||||||||| | ||||||||| || | || | ||| ||| Sbjct 7426542 TAAGTTTTAACAGCAGATTCTATATCATCCTTATGAATTCCAACAGAAACCCTCATCAAC 7426483 Query 80455 ATGTGCTGAGGTCTTTCAACGATCTTGTTATT-TATTTTCAACAAGTAAGATTTTTCCAA 80513 || |||||||| ||||| || | ||| | || | |||||||| |||||| | || | Sbjct 7426482 ATATGCTGAGGCCTTTCTAC-AACTTTTCCTTCAACTTTCAACAGATAAGATCTCTCGAG 7426424 Query 80514 AGTTTTAAAACCAAAATA 80531 ||||| || ||||| || Sbjct 7426423 GGTTTTGAATCCAAAGTA 7426406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718204811228280