Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq55 158 1e-33 seq104 127 2e-24 seq7 93.3 4e-14 >seq55 Length=606834 Score = 158 bits (174), Expect = 1e-33 Identities = 380/565 (67%), Gaps = 15/565 (3%) Strand=Plus/Minus Query 13869 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13928 ||||| ||||||||||||||||| || || || | |||||| ||||||||||| ||| Sbjct 250255 AAACAAGCAAAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTT 250196 Query 13929 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA-GCAAATGACCCG-GAAA 13986 || || ||||| || || |||||||| | |||||| |||||| ||| ||| | |||| Sbjct 250195 AAACCAGGCATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACCAGAGAAA 250136 Query 13987 AGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT 14046 | |||| || ||||| |||||| || | | || ||| ||||||| | Sbjct 250135 AAAATA--CCTTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAACGAATC-CGACGAA 250079 Query 14047 TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAG 14106 ||| |||||||| |||||| || | ||| || |||| || || || ||||||| Sbjct 250078 TCG--ATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAG 250021 Query 14107 CATTAAATAAATATTCCTTCTCTTTAGTA---CTTGAAATGTATGTATCAATAAGTAAGC 14163 ||| ||| ||| | |||||| | | ||| || || || |||| ||| | | Sbjct 250020 CATGAAACAAACGATTCTTCTCAACCGAATCGCTT---ATATACGTTTCAAGAAGGAGAC 249964 Query 14164 TATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCAT-AAAAGCATCTAGCT 14222 ||||||||||||| ||||| || || || || || |||||||| | ||||||| | || Sbjct 249963 TATACATTTCAGAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCA-CGCGCC 249905 Query 14223 TCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCA 14282 || || ||| ||||| |||||| | || | ||| || ||| || || || Sbjct 249904 TCTGAAACTTGAACTTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCG 249845 Query 14283 CTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTT 14342 || || |||||||| | | || | ||||| | | || | | | | || Sbjct 249844 GATGCGGCGAAAAATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTG 249785 Query 14343 TTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACA 14402 ||||||| | ||| | || | ||| ||||| || | ||||| || || | Sbjct 249784 TTCCAATGTTGAAGATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCG 249725 Query 14403 GCTTTTTTATACATTACCCATATTT 14427 |||||||| |||||| |||| |||| Sbjct 249724 GCTTTTTTGTACATTTCCCAAATTT 249700 Score = 158 bits (174), Expect = 1e-33 Identities = 380/565 (67%), Gaps = 15/565 (3%) Strand=Plus/Minus Query 13869 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13928 ||||| ||||||||||||||||| || || || | |||||| ||||||||||| ||| Sbjct 258938 AAACAAGCAAAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTT 258879 Query 13929 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA-GCAAATGACCCG-GAAA 13986 || || ||||| || || |||||||| | |||||| |||||| ||| ||| | |||| Sbjct 258878 AAACCAGGCATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACCAGAGAAA 258819 Query 13987 AGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT 14046 | |||| || ||||| |||||| || | | || ||| ||||||| | Sbjct 258818 AAAATA--CCTTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAACGAATC-CGACGAA 258762 Query 14047 TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAG 14106 ||| |||||||| |||||| || | ||| || |||| || || || ||||||| Sbjct 258761 TCG--ATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAG 258704 Query 14107 CATTAAATAAATATTCCTTCTCTTTAGTA---CTTGAAATGTATGTATCAATAAGTAAGC 14163 ||| ||| ||| | |||||| | | ||| || || || |||| ||| | | Sbjct 258703 CATGAAACAAACGATTCTTCTCAACCGAATCGCTT---ATATACGTTTCAAGAAGGAGAC 258647 Query 14164 TATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCAT-AAAAGCATCTAGCT 14222 ||||||||||||| ||||| || || || || || |||||||| | ||||||| | || Sbjct 258646 TATACATTTCAGAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCA-CGCGCC 258588 Query 14223 TCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCA 14282 || || ||| ||||| |||||| | || | ||| || ||| || || || Sbjct 258587 TCTGAAACTTGAACTTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCG 258528 Query 14283 CTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTT 14342 || || |||||||| | | || | ||||| | | || | | | | || Sbjct 258527 GATGCGGCGAAAAATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTG 258468 Query 14343 TTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACA 14402 ||||||| | ||| | || | ||| ||||| || | ||||| || || | Sbjct 258467 TTCCAATGTTGAAGATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCG 258408 Query 14403 GCTTTTTTATACATTACCCATATTT 14427 |||||||| |||||| |||| |||| Sbjct 258407 GCTTTTTTGTACATTTCCCAAATTT 258383 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/175 (72%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 13580 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13639 ||| |||||||| | ||| | || ||||| |||||||| || |||| || || || Sbjct 250544 TTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAA 250485 Query 13640 TTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATA 13698 ||||| ||||||| ||||| | |||| | | ||||| ||||||| || || | Sbjct 250484 CTCCATCCAATCAAAAGGATTC-TGAACATTATAAACTTTCCCACAACCAAGCTCACCCA 250426 Query 13699 GTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACC 13753 || ||||| |||| ||||||||||| || ||| ||||||| |||||| || Sbjct 250425 ACAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCC 250371 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/175 (72%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 13580 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13639 ||| |||||||| | ||| | || ||||| |||||||| || |||| || || || Sbjct 259227 TTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAA 259168 Query 13640 TTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATA 13698 ||||| ||||||| ||||| | |||| | | ||||| ||||||| || || | Sbjct 259167 CTCCATCCAATCAAAAGGATTC-TGAACATTATAAACTTTCCCACAACCAAGCTCACCCA 259109 Query 13699 GTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACC 13753 || ||||| |||| ||||||||||| || ||| ||||||| |||||| || Sbjct 259108 ACAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCC 259054 >seq104 Length=244920 Score = 127 bits (140), Expect = 2e-24 Identities = 260/377 (69%), Gaps = 16/377 (4%) Strand=Plus/Plus Query 13869 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13928 ||||| || |||||||||||||| || || || | |||||| ||||||||||| ||| Sbjct 172064 AAACAAGCGAAATCACAATGAAGTCCTTCGTCACACAAAATAAGCTCGTTTGAAAAAGTT 172123 Query 13929 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA-GCAAATGACCCG-GAAA 13986 || || |||| || || |||||||| | ||||||||| ||| ||| || | |||| Sbjct 172124 AAACCATGCATTAAACCACGTTTTTTAAGCCAAAATATCGCACATAAACTACTAGAGAAA 172183 Query 13987 AGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT 14046 | |||| || ||||| |||||| || | | || ||| ||| | | | Sbjct 172184 AAAATA--CCTTCAACGCAAGCAAAAGCAACGATTCTTTCAACAATCAA--ATCGACGAA 172239 Query 14047 TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAG 14106 ||| |||||||| |||||| || | ||| || |||| || || || ||||||| Sbjct 172240 TCG--ATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAG 172297 Query 14107 CATTAAATAAATATTCCTTCT---CTTTAGTACTTGAAATGTATGTATCAATAAGTAAGC 14163 ||| ||| ||| | | ||||| | | ||| || ||||| |||| ||| | | Sbjct 172298 CATGAAACAAACAATTCTTCTCAACCAAATCGCTT---ATATATGTTTCAAGAAGGAGAC 172354 Query 14164 TATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATA-AAAGCATCTAGCT 14222 ||||||||||||| ||||| || || || || || || || | || |||||| | ||| Sbjct 172355 TATACATTTCAGAATGTATATTCTCAATCGCGATTTGGAACCTGTAGAAAGCA-CGCGCT 172413 Query 14223 TCCGACCATTGTACTTC 14239 || || ||| ||||| Sbjct 172414 TCTGAAACTTGAACTTC 172430 >seq7 Length=48961560 Score = 93.3 bits (102), Expect = 4e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 13872 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13931 || ||||||||||| ||||| || ||||||||| || || || ||||| ||||| || Sbjct 5781756 CAAGCAAAATCACAGTGAAGACCTTCATCTCTAGAGATGAGCTCATTTGAGAATGTCAAA 5781697 Query 13932 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 13970 |||||||||||||||| ||||| | ||| ||||| ||| Sbjct 5781696 CCTGGCATCAATCCTCTCTTTTTAAGCCAGAATATGGCA 5781658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479685262231800