Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq55 132 7e-26 >seq55 Length=606834 Score = 132 bits (146), Expect = 7e-26 Identities = 370/557 (66%), Gaps = 12/557 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||||||||||||||||| || | ||||| || ||||| | |||||| || ||| | Sbjct 249702 ATTTGGGAAATGTACAAAAAAGCCGAAGCCTCATTCTGGACCGCCGAAGAAGTTGATTTA 249761 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || | || || | ||||| | | ||| ||||| || ||| | ||| |||| Sbjct 249762 TCACAAGATCTTCAACATTGGAACA---ATTTAACTGACGGCGAACGACACTTTGTATCC 249818 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197 ||| || | || || || |||| ||||| || ||||| || |||| || || | | Sbjct 249819 CACGTTCTTGCATTTTTCGCCGCATCCGACGGCATCGTTTTAGAGAATCTTGCTG-GAAG 249877 Query 125198 ATTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCGTGC-TTTTACGGATTCCAAATCATG 125255 |||| ||| |||| | || |||||| | ||||| |||||||| || |||||| | Sbjct 249878 ATTCATGAAAGAAGTTCA-AGTTTCAGAGGCG-CGTGCTTTTTACGGTTTTCAAATCGCG 249935 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG 125315 |||||||| | || || |||||||| | || |||| | ||| || ||||| || Sbjct 249936 ATTGAGAATATACATTCTGAAATGTATAGTCTCCTTCTTGAAACGTATATAAGCGATTCG 249995 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375 || | | ||| | || || || ||| | || | ||| ||||| || || Sbjct 249996 GTTGAGAAGAATCGTTTGTTTCATGCTATTGAGACGATTCCTTGTATTCGTAAGAAAGCG 250055 Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435 | |||| | ||||||||| || | | ||||| || || ||| | || || Sbjct 250056 GATTGGGCTTTGAAATGGATCGAT-TCGTC--GGATTCGTTTGCTGAAAGAATCGTTGCT 250112 Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495 || || ||| || || || || || || |||||||| || || |||||||| || Sbjct 250113 TTTGCTTGCGTTGAAGGTATTTTTTTCTCTGGTAGTTTCTGTGCAATTTTTTGGCTTAAA 250172 Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555 || || || | ||||| || | || |||||| |||| || || ||||| || Sbjct 250173 AAACGTGGTTTAATGCCTGGTTTAACTTTTTCAAACGAGCTTATTTCGCGTGACGAAGGA 250232 Query 125556 CTACACTGTGACTTTGC 125572 || || ||||| ||||| Sbjct 250233 CTTCATTGTGATTTTGC 250249 Score = 132 bits (146), Expect = 7e-26 Identities = 370/557 (66%), Gaps = 12/557 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||||||||||||||||| || | ||||| || ||||| | |||||| || ||| | Sbjct 258385 ATTTGGGAAATGTACAAAAAAGCCGAAGCCTCATTCTGGACCGCCGAAGAAGTTGATTTA 258444 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || | || || | ||||| | | ||| ||||| || ||| | ||| |||| Sbjct 258445 TCACAAGATCTTCAACATTGGAACA---ATTTAACTGACGGCGAACGACACTTTGTATCC 258501 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197 ||| || | || || || |||| ||||| || ||||| || |||| || || | | Sbjct 258502 CACGTTCTTGCATTTTTCGCCGCATCCGACGGCATCGTTTTAGAGAATCTTGCTG-GAAG 258560 Query 125198 ATTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCGTGC-TTTTACGGATTCCAAATCATG 125255 |||| ||| |||| | || |||||| | ||||| |||||||| || |||||| | Sbjct 258561 ATTCATGAAAGAAGTTCA-AGTTTCAGAGGCG-CGTGCTTTTTACGGTTTTCAAATCGCG 258618 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG 125315 |||||||| | || || |||||||| | || |||| | ||| || ||||| || Sbjct 258619 ATTGAGAATATACATTCTGAAATGTATAGTCTCCTTCTTGAAACGTATATAAGCGATTCG 258678 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375 || | | ||| | || || || ||| | || | ||| ||||| || || Sbjct 258679 GTTGAGAAGAATCGTTTGTTTCATGCTATTGAGACGATTCCTTGTATTCGTAAGAAAGCG 258738 Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435 | |||| | ||||||||| || | | ||||| || || ||| | || || Sbjct 258739 GATTGGGCTTTGAAATGGATCGAT-TCGTC--GGATTCGTTTGCTGAAAGAATCGTTGCT 258795 Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495 || || ||| || || || || || || |||||||| || || |||||||| || Sbjct 258796 TTTGCTTGCGTTGAAGGTATTTTTTTCTCTGGTAGTTTCTGTGCAATTTTTTGGCTTAAA 258855 Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555 || || || | ||||| || | || |||||| |||| || || ||||| || Sbjct 258856 AAACGTGGTTTAATGCCTGGTTTAACTTTTTCAAACGAGCTTATTTCGCGTGACGAAGGA 258915 Query 125556 CTACACTGTGACTTTGC 125572 || || ||||| ||||| Sbjct 258916 CTTCATTGTGATTTTGC 258932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740993180888520