Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq6 104 2e-17 >seq6 Length=59463898 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| |||| | ||| ||||| || || ||||||||||| ||||||||||| | Sbjct 20997289 CCACCTCTCAACCGAAGCACTAAATGAAGGGTGGATTCTTTTTGGATGTTGTAATCAGCA 20997230 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || |||||| |||||||| || || | ||||| || |||||||| || Sbjct 20997229 AGGGTACGGCCATCTTCTAATTGTTTACCGGCGAAGATAAGTCTTTGTTGATCTGGTGGG 20997170 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| || || |||||| | | | | | |||| | ||| Sbjct 20997169 ATCCCTTCCTTGTCTTGGATCTTAGCTTTCACGTTGTCTATGGTATCGGAACTCTCCACC 20997110 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | ||| ||||||||||||||||| ||||| || || |||||||| Sbjct 20997109 TCAAGGGTGATGGTTTTGCCGGTCAATGTTTTCACGAAGATTTGCAT 20997063 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 |||||||| || || ||||| ||||| || |||||||| | | || | ||||||| Sbjct 20997727 ACCAAATGAAGGGTGGATTCCTTTTGGATATTGTAATCAGCTAGGGTGCGACCATCTTCC 20997668 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 ||||| || || || | ||||||||||| ||||| || | || |||||||| Sbjct 20997667 AATTGCTTACCGGCGAAGATAAGCCTCTGCTGATCAGGAGGGATACCCTCTTTGTCCTGG 20997608 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 || || ||| || | ||| | ||| || ||| || | ||||||||| || Sbjct 20997607 ATCTTGGCTTTGACATTATCAATCGTATCAGAAGATTCAACCTCGAGGGTAATGGTCTTC 20997548 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || ||||| || || |||||||||||||| Sbjct 20997547 CCTGTCAAAGTCTTAACAAAAATTTGCAT 20997519 Score = 91.5 bits (100), Expect = 1e-13 Identities = 109/147 (74%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 19970 TTTTATCATT-TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTAT 20028 ||| ||||| ||||||||| | |||||||||||| || ||||| ||||| |||||||| Sbjct 24381194 TTTAATCATGGTTCCTCCTCTGAGCCTCAACACCAAGTGAAGTGTTGATTCCTTTTGTAT 24381253 Query 20029 GTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTG 20088 ||| ||||| | | ||| | |||||||| || || || ||| |||| | |||||| Sbjct 24381254 GTTATAATCTGCAAGAGTGCGACCATCTTCCAGCTGCTTACCAGCAAAAATCAACCTCTG 24381313 Query 20089 TTGATCGACGGGCACGCCTTCTTTGTC 20115 || || || | ||||| ||||| Sbjct 24381314 CTGGTCAGGAGGGATACCTTCCTTGTC 24381340 Score = 89.7 bits (98), Expect = 4e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058 ||||||||| ||||| || || ||||| ||||||||||| ||| |||| |||||| Sbjct 17145868 CACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAATCTGCCAAAGTTCGGCCATCTTC 17145809 Query 20059 CAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115 | |||||||||||| | || ||||||||||| || || | |||||| ||||| Sbjct 17145808 AAGCTGTTTGCCCGCAAAGATGAGCCTCTGTTGGTCTGGTGGGATGCCTTCCTTGTC 17145752 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || ||||| || ||||| || || ||||| ||||| |||||| | | ||| | |||| Sbjct 20998186 AAAACCAAGTGAAGTGTGGACTCCTTTTGGATGTTATAATCGGCAAGAGTCCTTCCATCT 20998127 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || | ||||| || ||| | ||||||||||| ||||| || | || || || || Sbjct 20998126 TCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGGATACCCTCCTTATCT 20998067 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 ||| || |||||| | ||| || ||| | || |||| ||||| || Sbjct 20998066 TGAATCTTGGCTTTCACATTATCAATAGTATCTGAACTCTCTACCTCCAAAGTAATAGTC 20998007 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || || ||||| || || ||||||||||||||| Sbjct 20998006 TTTCCTGTCAAAGTCTTAACAAAAATTTGCATT 20997974 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || || | |||||| ||||| || | |||||||| || || || || ||||| || Sbjct 20998429 CCACCACGAAGCCTCAAAACCAAGTGCAAAGTAGATTCCTTCTGGATATTATAATCAGCC 20998370 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| ||| ||||| || ||||| ||| |||| |||||||| ||||| || Sbjct 20998369 AGAGTACGTCCATCCTCCAACTGCTTGCCGGCAAAAATTAGCCTCTGCTGATCTGGAGGA 20998310 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | || |||||||| |||||| ||||| | | | | ||| | ||| Sbjct 20998309 ATACCCTCTTTGTCCTGAATTTTCGCCTTCACATTATCTATTGTATCAGAACTTTCAACC 20998250 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| || || || || ||||| | || ||||||||||||||||| Sbjct 20998249 TCCAAAGTTATTGTCTTTCCGGTAAGGGTCTTGACAAAAATTTGCAT 20998203 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20006 TGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGT 20065 || || ||||||||||| || || |||||||| ||| ||| | ||| ||||| || Sbjct 20998633 TGCAGGGTAGATTCTTTCTGAATATTGTAATCTGCCAAAGTACGACCATCCTCCAACTGC 20998574 Query 20066 TTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTT 20125 ||||| ||| |||||||||| || ||||| ||| | || || || || ||| ||| Sbjct 20998573 TTGCCAGCAAAAATAAGCCTTTGCTGATCTGGGGGAATACCCTCCTTATCCTGAATCTTT 20998514 Query 20126 TGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTC 20185 |||||| | ||| | || |||| ||| | |||||| || || || || Sbjct 20998513 GCTTTCACATTATCAATTGTGTCAGAGCTTTCCACTTCTAAGGTAATAGTCTTCCCAGTA 20998454 Query 20186 AACGTTTTGACAAAAATTTGCAT 20208 | || || ||||| |||||||| Sbjct 20998453 AGTGTCTTCACAAATATTTGCAT 20998431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419550754524687