Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq55 176 4e-39 seq104 95.1 1e-14 seq7 84.2 2e-11 >seq55 Length=606834 Score = 176 bits (194), Expect = 4e-39 Identities = 559/856 (65%), Gaps = 17/856 (2%) Strand=Plus/Minus Query 12847 CATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTC 12906 ||||||||| ||| |||||||| | ||| | || ||||||||||| || || |||| Sbjct 250556 CATAACAGAAGCTTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTG 250497 Query 12907 TAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACAC-- 12964 | ||||| ||||| |||| |||||||| | ||||| || | ||| ||| Sbjct 250496 AAGAGAAATCAACTCCATCCAATCAAAAGGATTCT--GAACATTATAAACTTTCCCACAA 250439 Query 12965 CCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAG 13024 || | || ||||| || || ||||| ||||| || ||||| |||| ||||||| Sbjct 250438 CCAAGCTCACCCAACAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCA 250379 Query 13025 TTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACT 13084 ||||| || | || || | || || | ||| | | || || ||||| Sbjct 250378 TTCATCCCGACCAACGCGCACGGAAGCGCGTCACAAACAAACTCCCTCTCAATCTCAACC 250319 Query 13085 GCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGAT-TTGATAGATGCTTAA- 13142 || || | || || | |||| || || || | || | || | || | || Sbjct 250318 GCATCACTCACAATCT-TCTTCACTCGCTC-CTCACTCAGTTTATTCCTCAATAGTGAAT 250261 Query 13143 ACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAA 13202 | | || ||| ||||||||||| || | |||||| || | || ||||||||||||| Sbjct 250260 AAAGCAAACAAGCAAAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAA 250201 Query 13203 ATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCG 13262 | |||| ||| ||||| | || |||||||||| |||||| || ||| || ||| | Sbjct 250200 AAGTTAAACCAGGCATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACCAG 250141 Query 13263 aaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTT 13322 | ||||| || |||||||| ||||| || | | |||||| || ||| | | Sbjct 250140 AGAAAAAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAACGAA----TCC 250085 Query 13323 TACTC-TCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCT 13381 || || ||||| || ||||| | ||||| | || || || | || Sbjct 250084 GACGAATCGATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCA 250025 Query 13382 ATTGCGTTAAATAAATAAtttttttCCTTACTG--TCTAAAATATAAGTATCTATCAATA 13439 || || | ||| ||| ||| || || || | || ||||| || || | | | Sbjct 250024 ATAGCATGAAACAAACGATTCTTCTCA--ACCGAATCGCTTATATACGTTTCAAGAAGGA 249967 Query 13440 AGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAG 13499 ||||||||||| ||||| ||||| || ||||| ||||| ||||| |||||| | | Sbjct 249966 GACTATACATTTCAGAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCG 249907 Query 13500 CCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGT 13559 ||||||| || |||||||| |||||| | || | || || ||| || |||| Sbjct 249906 CCTCTGAAACTTGAACTTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGT 249847 Query 13560 CACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACT 13619 | || || ||||| ||||| | ||| | ||| | | |||| || | || | Sbjct 249846 CGGATGCGGCGAAAAATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAAT 249787 Query 13620 TTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAA 13679 | ||||| | ||| ||||| ||||||||| || || || ||||||| || || || Sbjct 249786 TGTTCCAATGTTGAAGATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTT 249727 Query 13680 CAGCCTTCTTATACAT 13695 | || || || ||||| Sbjct 249726 CGGCTTTTTTGTACAT 249711 Score = 176 bits (194), Expect = 4e-39 Identities = 559/856 (65%), Gaps = 17/856 (2%) Strand=Plus/Minus Query 12847 CATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTC 12906 ||||||||| ||| |||||||| | ||| | || ||||||||||| || || |||| Sbjct 259239 CATAACAGAAGCTTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTG 259180 Query 12907 TAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACAC-- 12964 | ||||| ||||| |||| |||||||| | ||||| || | ||| ||| Sbjct 259179 AAGAGAAATCAACTCCATCCAATCAAAAGGATTCT--GAACATTATAAACTTTCCCACAA 259122 Query 12965 CCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAG 13024 || | || ||||| || || ||||| ||||| || ||||| |||| ||||||| Sbjct 259121 CCAAGCTCACCCAACAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCA 259062 Query 13025 TTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACT 13084 ||||| || | || || | || || | ||| | | || || ||||| Sbjct 259061 TTCATCCCGACCAACGCGCACGGAAGCGCGTCACAAACAAACTCCCTCTCAATCTCAACC 259002 Query 13085 GCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGAT-TTGATAGATGCTTAA- 13142 || || | || || | |||| || || || | || | || | || | || Sbjct 259001 GCATCACTCACAATCT-TCTTCACTCGCTC-CTCACTCAGTTTATTCCTCAATAGTGAAT 258944 Query 13143 ACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAA 13202 | | || ||| ||||||||||| || | |||||| || | || ||||||||||||| Sbjct 258943 AAAGCAAACAAGCAAAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAA 258884 Query 13203 ATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCG 13262 | |||| ||| ||||| | || |||||||||| |||||| || ||| || ||| | Sbjct 258883 AAGTTAAACCAGGCATTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACCAG 258824 Query 13263 aaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTT 13322 | ||||| || |||||||| ||||| || | | |||||| || ||| | | Sbjct 258823 AGAAAAAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAACGAA----TCC 258768 Query 13323 TACTC-TCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCT 13381 || || ||||| || ||||| | ||||| | || || || | || Sbjct 258767 GACGAATCGATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCA 258708 Query 13382 ATTGCGTTAAATAAATAAtttttttCCTTACTG--TCTAAAATATAAGTATCTATCAATA 13439 || || | ||| ||| ||| || || || | || ||||| || || | | | Sbjct 258707 ATAGCATGAAACAAACGATTCTTCTCA--ACCGAATCGCTTATATACGTTTCAAGAAGGA 258650 Query 13440 AGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAG 13499 ||||||||||| ||||| ||||| || ||||| ||||| ||||| |||||| | | Sbjct 258649 GACTATACATTTCAGAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCG 258590 Query 13500 CCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGT 13559 ||||||| || |||||||| |||||| | || | || || ||| || |||| Sbjct 258589 CCTCTGAAACTTGAACTTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGT 258530 Query 13560 CACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACT 13619 | || || ||||| ||||| | ||| | ||| | | |||| || | || | Sbjct 258529 CGGATGCGGCGAAAAATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAAT 258470 Query 13620 TTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAA 13679 | ||||| | ||| ||||| ||||||||| || || || ||||||| || || || Sbjct 258469 TGTTCCAATGTTGAAGATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTT 258410 Query 13680 CAGCCTTCTTATACAT 13695 | || || || ||||| Sbjct 258409 CGGCTTTTTTGTACAT 258394 >seq104 Length=244920 Score = 95.1 bits (104), Expect = 1e-14 Identities = 249/376 (66%), Gaps = 18/376 (5%) Strand=Plus/Plus Query 13150 ACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAG 13209 ||| || |||||||| || | |||||| || | || |||||||||||||| |||| Sbjct 172066 ACAAGCGAAATCACAATGAAGTCCTTCGTCACACAAAATAAGCTCGTTTGAAAAAGTTAA 172125 Query 13210 ACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaa 13269 ||| |||| | || |||||||||| ||||||||| ||| || || || ||||| Sbjct 172126 ACCATGCATTAAACCACGTTTTTTAAGCCAAAATATCGCACATAAACTACTAGAGAAAAA 172185 Query 13270 TATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTAC-TCT 13328 || |||||||| ||||| || | | |||||| || | | | || | Sbjct 172186 AATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAACA-----ATCAAATCGACGAAT 172240 Query 13329 CTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGT 13388 | ||||| || ||||| | ||||| | || || || | || || || | Sbjct 172241 CGATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCAT 172300 Query 13389 TAAATAAATAAtttttttC--CTTACTGTCTAAAATATAAGTATCTATCAATAAG----C 13442 ||| ||| |||| || || | | | || |||| ||| | |||| ||| | Sbjct 172301 GAAACAAACAATTCTTCTCAACCAAATCGCT----TATA--TATGTTTCAAGAAGGAGAC 172354 Query 13443 TATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCT 13502 |||||||||| ||||| ||||| || ||||| |||||||| | || ||| | || | Sbjct 172355 TATACATTTCAGAATGTATATTCTCAATCGCGATTTGGAACCTGTAGAAAGCACGCGCTT 172414 Query 13503 CTGATACCTGAACTTC 13518 |||| || |||||||| Sbjct 172415 CTGAAACTTGAACTTC 172430 >seq7 Length=48961560 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210 || |||||||||||||| | |||||||||||| || ||||| ||||| ||||| | | Sbjct 5781756 CAAGCAAAATCACAGTGAAGACCTTCATCTCTAGAGATGAGCTCATTTGAGAATGTCAAA 5781697 Query 13211 CCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCA 13249 || ||||| | |||| ||||||| ||| ||||| ||| Sbjct 5781696 CCTGGCATCAATCCTCTCTTTTTAAGCCAGAATATGGCA 5781658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430944964734054