Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq7 168 1e-37 seq1208 149 1e-31 seq1 134 2e-27 seq5 125 1e-24 seq191 104 4e-18 >seq7 Length=48961560 Score = 168 bits (186), Expect = 1e-37 Identities = 199/267 (75%), Gaps = 2/267 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 ||||| ||||| || | | ||| ||||||||||||||||||| || ||||| || || Sbjct 2248727 GCTAAACGTCACCGTAAAGTTCTGAGAGATAACATCCAAGGAATAACAAAGCCTGCGATT 2248668 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| || || |||||||| || || ||| || ||| || | ||||| |||| | Sbjct 2248667 CGTCGTCTCGCACGACGTGGTGGCGTGAAACGTATCAGTGGGTTAATTTATGAGGAGACT 2248608 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611 |||| |||| | |||||||| || ||| ||| || | ||||||| || || || ||||| Sbjct 2248607 CGTGGTGTTCTCAAGATCTTTCTTGAGAACGTGATTCGTGATGCTGTTACA-TACACCGA 2248549 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| ||| || ||||||||||| |||||||| | || || ||| | || | || || Sbjct 2248548 GCATGCTCGCCGCAAGACTGTCACTGCCATGGATGTTGTTTACGCACTCAAGAGACAGGG 2248489 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698 | | | |||| ||||| || |||| Sbjct 2248488 CAGGACTCTTTACGGTTTCGGCGGTTA 2248462 Score = 102 bits (112), Expect = 1e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| || ||||||||||| ||||| |||||||| || | | | || | | || Sbjct 41380538 TCTTCGGGACAACATCCAAGGTATCACGAAGCCAGCAATTAGGAGATTAGCGAGAAGAGG 41380479 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || || ||| | || || ||| |||||||||| | |||| || ||||||||||| Sbjct 41380478 AGGTGTGAAGAGAATCAGCGGTTTGATCTATGAAGAAACACGTGGAGTCTTGAAGATCTT 41380419 Query 16573 CCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGAGCACGCTAAACGTAAGACTG 16631 | | ||| ||| || | ||||||| || || || || |||||||| | | ||||||| Sbjct 41380418 CTTGGAGAACGTGATTCGTGATGCTGTTACA-TACACAGAGCACGCAAGGAGGAAGACTG 41380360 Query 16632 TCACCTCCATGGATATCGTCTATGC 16656 | || | |||||| | || ||||| Sbjct 41380359 TTACTGCTATGGATGTTGTTTATGC 41380335 >seq1208 Length=330777 Score = 149 bits (164), Expect = 1e-31 Identities = 193/267 (72%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||||||||||| | ||| |||||||||| |||||||| || || || || || Sbjct 125576 CGCAAAGCGTCATCGCAAAGTTCTGAGAGATAACATTCAAGGAATAACGAAACCTGCGAT 125517 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||||| || | |||||||| || |||||| | ||| ||| ||||||| || | Sbjct 125516 TCGTCGTCTTGCAAGGCGTGGTGGTGTGAAGCGTATAAGTGGTTTGATCTATGAGGAAAC 125457 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | |||| | ||||| ||||| | | |||||| | ||||||| || || || || Sbjct 125456 TCGCGGTGTTCTCAAGATATTCCTTGAAAACGTTATTCGTGATGCTGTCACTTACACAGA 125397 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || ||| ||||| || || || | |||||| | || |||||| | || | || || Sbjct 125396 ACATGCTCGCCGTAAAACAGTTACTGCTATGGATGTTGTTTATGCACTTAAGAGGCAGGG 125337 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698 | | | |||| ||||| || |||| Sbjct 125336 CAGAACTCTTTACGGTTTCGGTGGTTA 125310 >seq1 Length=48359943 Score = 134 bits (148), Expect = 2e-27 Identities = 175/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || |||||||| |||||||| || || || || || | ||| |||||||| | |||||| Sbjct 11692437 CGCGATAACATTCAAGGAATTACGAAACCTGCCATTAGGCGTTTGGCTCGTAGAGGTGGA 11692378 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || |||||| || ||||| |||||||||| | || | |||| | ||||||||| | Sbjct 11692377 GTGAAGCGTATCAGCGGATTAATCTATGAAGAAACCCGCGGTGTTCTAAAGATCTTCTTG 11692318 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| || | |||||| | || || |||||||| | ||||||||||| || Sbjct 11692317 GAGAACGTGATTCGTGATGCCGTTACTTACACAGAGCACGCCAGGCGTAAGACTGTTACT 11692258 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 | |||||| | || ||||| || || | || || | | ||||||| ||||| || Sbjct 11692257 GCTATGGATGTTGTTTATGCTTTAAAGAGACAGGGAAGGACTCTTTATGGATTTGGGGGT 11692198 Query 16697 TA 16698 || Sbjct 11692197 TA 11692196 >seq5 Length=48169137 Score = 125 bits (138), Expect = 1e-24 Identities = 176/247 (71%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| ||||||||||| |||||||| ||||| ||||| ||| | |||| | | || Sbjct 24611049 TCTTCGCGATAACATCCAGGGAATCACAAAGCCCGCTATTCGTAGATTGGCGAGAAGAGG 24610990 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| || ||| | || ||| ||| |||||||||| | | | ||| ||||||||||| Sbjct 24610989 TGGTGTGAAGAGGATCAGTGGTTTGATCTATGAAGAAACCAGAGGTGTGTTGAAGATCTT 24610930 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 | | | |||||| | ||||||| | || || |||||||| | | |||||||| Sbjct 24610929 TTTGGAAAACGTTATTCGTGATGCTGTTACTTACACTGAGCACGCGAGGAGGAAGACTGT 24610870 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||| | |||||| | ||||| || | || | ||||| | | | ||||| || || Sbjct 24610869 CACTGCTATGGATGTTGTCTACGCTCTCAAGAGACAAGGAAGAACCCTCTATGGATTCGG 24610810 Query 16693 AAGTTAA 16699 | ||||| Sbjct 24610809 AGGTTAA 24610803 Score = 120 bits (132), Expect = 5e-23 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| ||||| |||||||||||||| ||||||||||| ||| | |||| | | || Sbjct 24623595 TCTTCGCGATAATATCCAAGGAATCACGAAGCCAGCTATTCGTAGATTGGCGAGAAGAGG 24623536 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| || ||| | || ||| ||| |||||||||| | | | ||| ||||||||||| Sbjct 24623535 TGGTGTGAAGAGAATCAGTGGTTTGATCTATGAAGAAACCAGAGGTGTGTTGAAGATCTT 24623476 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 | | | |||||| | ||||||| | || || |||||||| | | ||||| || Sbjct 24623475 TTTGGAAAACGTTATTCGTGATGCTGTTACTTACACTGAGCACGCGAGGAGAAAGACCGT 24623416 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || | |||||| | || ||||| | ||| | ||||| Sbjct 24623415 GACTGCTATGGATGTTGTTTATGCTCTTAAAAGACAAGG 24623377 Score = 111 bits (122), Expect = 2e-20 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| ||||| |||||||||||||| ||||||||||| ||| | || | | | || Sbjct 24629088 TCTTCGCGATAATATCCAAGGAATCACGAAGCCAGCTATTCGTAGATTGACGAGAAGAGG 24629029 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| || ||| | || ||| ||| |||||||||| | | | ||| ||||||||||| Sbjct 24629028 TGGTGTGAAGAGAATCAGTGGTTTGATCTATGAAGAAACCAGAGGTGTGTTGAAGATCTT 24628969 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 | | | ||||| | ||||||| | ||| || |||||||||| | || || || Sbjct 24628968 TTTGGAAAATGTTATTCGTGATGCTGTTACCTACACTGAGCACGCTAGGAGAAAAACCGT 24628909 Query 16633 CACCTCCATGGATATCGTCTATGC 16656 || | |||||| | || ||||| Sbjct 24628908 GACTGCTATGGATGTTGTTTATGC 24628885 >seq191 Length=372920 Score = 104 bits (114), Expect = 4e-18 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 ||||||||||||||||| || || || || || |||||||| || | ||||| || || Sbjct 159802 GATAACATCCAAGGAATAACAAAACCTGCAATTCGTCGTCTCGCAAGACGTGGCGGTGTG 159861 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| | || | | |||||||| | ||||| ||| | || |||||||| || Sbjct 159862 AAGCGTATAAGCGGTCTTATTTATGAAGAAACTCGTGGCGTTCTCAAAATCTTCCTTGAG 159921 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| || | |||||| | |||||| || || ||| || || ||||| || | Sbjct 159922 AACGTGATTCGCGATGCTGTTACCTATACTGAACATGCTCGCCGCAAAACTGTTACTGCT 159981 Query 16640 ATGGATATCGTCTATGC 16656 |||||| | || ||||| Sbjct 159982 ATGGATGTTGTTTATGC 159998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79068683734011