Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq55 183 3e-41 seq104 114 1e-20 seq7 86.0 7e-12 >seq55 Length=606834 Score = 183 bits (202), Expect = 3e-41 Identities = 539/827 (65%), Gaps = 31/827 (4%) Strand=Plus/Minus Query 21184 TTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGA 21243 ||| ||||| || | ||| | || || ||||| || ||||| |||| | || || | Sbjct 250544 TTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAA 250485 Query 21244 TTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAA 21303 ||||| ||||||| ||||| | | ||| | | ||| |||||| || || || Sbjct 250484 CTCCATCCAATCAAAAGGATTCTGAACATTATAAACTTTCCCACAACCAAGCTCACCCAA 250425 Query 21304 TAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAA 21363 || ||||| || || || || ||||| || | ||| || |||| |||||| |||| ||| Sbjct 250424 CAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCCGACCAA 250365 Query 21364 TTTTACAGGAAGAGCTTTTGTCAAAAA-AGATT---TTTCTATAGAGACGGCTTCA---A 21416 ||||| || |||| ||| | | | | || || || || ||| | Sbjct 250364 CGCGCACGGAAGCGC----GTCACAAACAAACTCCCTCTCAATCTCAACCGCATCACTCA 250309 Query 21417 CAATTATATTTATTA--TCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAA 21474 |||| | || | | |||| ||| | || | ||| || | | | ||| Sbjct 250308 CAATCTTCTTCACTCGCTCCTC-----ACTCAGTTTATTCCTCAATAGTGAATAAAGCAA 250254 Query 21475 ACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAA 21534 ||| |||||||||||||| | ||||| || | || | || || ||||| ||||| Sbjct 250253 ACAAGCAAAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAA 250194 Query 21535 ACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCT-CCTGAAAAGA 21593 ||| |||||||| || | ||||| | |||||| |||| | || | || || || || | Sbjct 250193 ACCAGGCATTAAACCACGTTTTTTAAGCCAAAAAATTG-CACAGAAACTACCAGAGAAAA 250135 Query 21594 AAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCA 21653 |||| || |||||| |||||| ||||| | || |||| | | | | | | | Sbjct 250134 AAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAACGAA-----TCCGACGA 250080 Query 21654 AT--ATCCATTTTTCTGCCCATTTTGCCTTTTCTTT--AATACAATCAATTGTATCAATA 21709 || |||||||| ||||| | || |||||| ||||||| ||| || |||||| Sbjct 250079 ATCGATCCATTTCAAAGCCCAATCCGC--TTTCTTACGAATACAAGGAATCGTCTCAATA 250022 Query 21710 GCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTA 21769 || | || | | |||| || ||| | |||| |||| |||| Sbjct 250021 GCATGAAACAAACGATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGGAGACTA 249962 Query 21770 TACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCT 21829 |||||||||||||||||||| || ||||| || ||||| ||||||||| | |||||| Sbjct 249961 TACATTTCAGAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCGCCTCT 249902 Query 21830 GAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTG 21889 ||| |||||| || |||| | ||| | || || || || || || Sbjct 249901 GAAACTTGAACTTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGAT 249842 Query 21890 GCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTTC 21949 ||||| |||||||| | | | || ||| | ||||||| || ||||| || ||| Sbjct 249841 GCGGCGAAAAATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTC 249782 Query 21950 CAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996 |||| | | ||||| ||||||||| |||||||| | ||||| || Sbjct 249781 CAATGTTGAAGATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAA 249735 Score = 183 bits (202), Expect = 3e-41 Identities = 539/827 (65%), Gaps = 31/827 (4%) Strand=Plus/Minus Query 21184 TTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGA 21243 ||| ||||| || | ||| | || || ||||| || ||||| |||| | || || | Sbjct 259227 TTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAA 259168 Query 21244 TTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAA 21303 ||||| ||||||| ||||| | | ||| | | ||| |||||| || || || Sbjct 259167 CTCCATCCAATCAAAAGGATTCTGAACATTATAAACTTTCCCACAACCAAGCTCACCCAA 259108 Query 21304 TAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAA 21363 || ||||| || || || || ||||| || | ||| || |||| |||||| |||| ||| Sbjct 259107 CAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCCGACCAA 259048 Query 21364 TTTTACAGGAAGAGCTTTTGTCAAAAA-AGATT---TTTCTATAGAGACGGCTTCA---A 21416 ||||| || |||| ||| | | | | || || || || ||| | Sbjct 259047 CGCGCACGGAAGCGC----GTCACAAACAAACTCCCTCTCAATCTCAACCGCATCACTCA 258992 Query 21417 CAATTATATTTATTA--TCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAA 21474 |||| | || | | |||| ||| | || | ||| || | | | ||| Sbjct 258991 CAATCTTCTTCACTCGCTCCTC-----ACTCAGTTTATTCCTCAATAGTGAATAAAGCAA 258937 Query 21475 ACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAA 21534 ||| |||||||||||||| | ||||| || | || | || || ||||| ||||| Sbjct 258936 ACAAGCAAAATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAA 258877 Query 21535 ACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCT-CCTGAAAAGA 21593 ||| |||||||| || | ||||| | |||||| |||| | || | || || || || | Sbjct 258876 ACCAGGCATTAAACCACGTTTTTTAAGCCAAAAAATTG-CACAGAAACTACCAGAGAAAA 258818 Query 21594 AAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCA 21653 |||| || |||||| |||||| ||||| | || |||| | | | | | | | Sbjct 258817 AAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAGCAAACGAA-----TCCGACGA 258763 Query 21654 AT--ATCCATTTTTCTGCCCATTTTGCCTTTTCTTT--AATACAATCAATTGTATCAATA 21709 || |||||||| ||||| | || |||||| ||||||| ||| || |||||| Sbjct 258762 ATCGATCCATTTCAAAGCCCAATCCGC--TTTCTTACGAATACAAGGAATCGTCTCAATA 258705 Query 21710 GCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTA 21769 || | || | | |||| || ||| | |||| |||| |||| Sbjct 258704 GCATGAAACAAACGATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGGAGACTA 258645 Query 21770 TACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCT 21829 |||||||||||||||||||| || ||||| || ||||| ||||||||| | |||||| Sbjct 258644 TACATTTCAGAATGTATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCGCCTCT 258585 Query 21830 GAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTG 21889 ||| |||||| || |||| | ||| | || || || || || || Sbjct 258584 GAAACTTGAACTTCTTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGAT 258525 Query 21890 GCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTTC 21949 ||||| |||||||| | | | || ||| | ||||||| || ||||| || ||| Sbjct 258524 GCGGCGAAAAATGCAAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTC 258465 Query 21950 CAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996 |||| | | ||||| ||||||||| |||||||| | ||||| || Sbjct 258464 CAATGTTGAAGATCTTGTGATAAATCAACTTCTTCGGCGGTCCAGAA 258418 >seq104 Length=244920 Score = 114 bits (126), Expect = 1e-20 Identities = 254/377 (67%), Gaps = 16/377 (4%) Strand=Plus/Plus Query 21473 AAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAA-TTCATTAGAAAATGT 21531 ||||| || ||||||||||| | ||||| || | || | ||| || || ||||| || Sbjct 172064 AAACAAGCGAAATCACAATGAAGTCCTTCGTCAC-ACAAAATAAGCTCGTTTGAAAAAGT 172122 Query 21532 TAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCT-GAAA 21590 |||||| ||||||| || | ||||| | ||||||||| | | || | || || || | Sbjct 172123 TAAACCATGCATTAAACCACGTTTTTTAAGCCAAAATATCG-CACATAAACTACTAGAGA 172181 Query 21591 AGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTAT 21650 | ||||| || |||||| |||||| ||||| | || |||| | || | | Sbjct 172182 AAAAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAAC-AATCAA-----ATCGA 172235 Query 21651 CCAAT--ATCCATTTTTCTGCCCATTTTGCCTTTTCTT--TAATACAATCAATTGTATCA 21706 | ||| |||||||| ||||| | || |||||| ||||||| ||| || ||| Sbjct 172236 CGAATCGATCCATTTCAAAGCCCAATCCGC--TTTCTTACGAATACAAGGAATCGTCTCA 172293 Query 21707 ATAGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNA 21766 ||||| | || | | ||| || ||| | | |||| |||| | Sbjct 172294 ATAGCATGAAACAAACAATTCTTCTCAACCAAATCGCTTATATATGTTTCAAGAAGGAGA 172353 Query 21767 CTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCC 21826 ||||||||||||||||||||||| || ||||| || || || | ||| ||| | || Sbjct 172354 CTATACATTTCAGAATGTATATTCTCAATCGCGATTTGGAACCTGTAGAAAGCACGCGCT 172413 Query 21827 TCTGAACATTGAACCTC 21843 |||||| |||||| || Sbjct 172414 TCTGAAACTTGAACTTC 172430 >seq7 Length=48961560 Score = 86.0 bits (94), Expect = 7e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 21476 CATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAA 21535 || ||||||||||| || | ||||||||| ||| || | ||||| || ||||| ||| Sbjct 5781756 CAAGCAAAATCACAGTGAAGACCTTCATCTCTAGAGATGAGCTCATTTGAGAATGTCAAA 5781697 Query 21536 CCGGGCATTAATCCTCTCTTTTTTAACCAAAATAT 21570 || ||||| |||||||||||||| | ||| ||||| Sbjct 5781696 CCTGGCATCAATCCTCTCTTTTTAAGCCAGAATAT 5781662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531853414287480