Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq55 235 7e-57 seq104 129 7e-25 >seq55 Length=606834 Score = 235 bits (260), Expect = 7e-57 Identities = 593/897 (66%), Gaps = 6/897 (1%) Strand=Plus/Minus Query 33012 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 33071 ||| || ||||| || || || || || ||||| ||||| || |||| | || || Sbjct 250544 TTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAA 250485 Query 33072 TTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 33131 ||||| ||||||| ||||| ||||||||||| ||| | | || | ||| | Sbjct 250484 CTCCATCCAATCAAAAGGATTCTGAACATTATAAACTTTCCCACAACCAAGCTCACCCAA 250425 Query 33132 CAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT-AA 33190 ||| ||||| || ||||| || ||||| |||||| |||| |||||| || | || Sbjct 250424 CAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCCGACCAA 250365 Query 33191 GTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 33250 || ||||| || || || ||| || ||||| |||||||| | | || Sbjct 250364 CGCGCAC-GGAAGCGCGTCACAAACAAACTCCCTCTCAATCTCAACCGCATCACTCACAA 250306 Query 33251 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310 | | || || |||||| || || | || || | | | |||||| || | Sbjct 250305 TCTTCTTCACTCGCTCCTCACTCAGTTTATTCCTCAATAGTGAATAAAGCAAACAAGCAA 250246 Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370 |||| || || || || ||||| | ||| || ||||| ||||| || | || |||| Sbjct 250245 AATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAAACCAGGCA 250186 Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430 ||| ||||| |||||||||||||| || | | ||| ||||| || || || |||| Sbjct 250185 TTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACCAGAGAAAAAAATACCTT 250126 Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTC--ATGTATCCACTT 33488 | || |||||| |||| | ||| || || | || | | | || ||||| || Sbjct 250125 CAACGCAAGCAAAAGCAACGATTCTTTCAGCAAA--CGAATCCGACGAATCGATCCATTT 250068 Query 33489 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33548 ||||||||| || ||||| | |||||| ||||| || || |||| ||| | | Sbjct 250067 CAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATGAAACAAACG 250008 Query 33549 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 33608 || || ||| ||| | | ||| || || | | |||||||||||||| ||||| Sbjct 250007 ATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGGAGACTATACATTTCAGAATG 249948 Query 33609 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 33668 || || ||||| || || ||||| ||||| ||| | ||||| | || || ||||| Sbjct 249947 TATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCGCCTCTGAAACTTGAACTTC 249888 Query 33669 TGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 33728 | | |||| | | || | ||| || || || ||||| || || ||||| || Sbjct 249887 TTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGCGGCGAAAAATGC 249828 Query 33729 CAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATC 33788 | || || || ||| | | |||| | |||| || ||||||| | | ||| Sbjct 249827 AAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCCAATGTTGAAGATC 249768 Query 33789 TTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTT 33848 || |||| ||| |||||||| | ||||| ||||| || || || ||||| ||||| | Sbjct 249767 TTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACATTTC 249708 Query 33849 CCAGATGTCATAATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAG 33905 ||| || | | |||| |||||||| ||| ||| | | ||| ||||| ||||| Sbjct 249707 CCAAATTTTAGGGTATTCAATTGGGAACATACAAAAACGGTCTGGGTTTGGAGCAAG 249651 Score = 235 bits (260), Expect = 7e-57 Identities = 593/897 (66%), Gaps = 6/897 (1%) Strand=Plus/Minus Query 33012 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 33071 ||| || ||||| || || || || || ||||| ||||| || |||| | || || Sbjct 259227 TTTCTGATATTCCCCAACGCGCTTCTCAAAAAAGTTAGTCTTCCCTTGAAGAGAAATCAA 259168 Query 33072 TTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 33131 ||||| ||||||| ||||| ||||||||||| ||| | | || | ||| | Sbjct 259167 CTCCATCCAATCAAAAGGATTCTGAACATTATAAACTTTCCCACAACCAAGCTCACCCAA 259108 Query 33132 CAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT-AA 33190 ||| ||||| || ||||| || ||||| |||||| |||| |||||| || | || Sbjct 259107 CAACCTATCGGCAACGAACTCAATATACTGGCTCATCAAATCACCATTCATCCCGACCAA 259048 Query 33191 GTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 33250 || ||||| || || || ||| || ||||| |||||||| | | || Sbjct 259047 CGCGCAC-GGAAGCGCGTCACAAACAAACTCCCTCTCAATCTCAACCGCATCACTCACAA 258989 Query 33251 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310 | | || || |||||| || || | || || | | | |||||| || | Sbjct 258988 TCTTCTTCACTCGCTCCTCACTCAGTTTATTCCTCAATAGTGAATAAAGCAAACAAGCAA 258929 Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370 |||| || || || || ||||| | ||| || ||||| ||||| || | || |||| Sbjct 258928 AATCACAATGAAGTCCTTCGTCACGCGAAATAAGCTCGTTTGAAAAAGTTAAACCAGGCA 258869 Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430 ||| ||||| |||||||||||||| || | | ||| ||||| || || || |||| Sbjct 258868 TTAAACCACGTTTTTTAAGCCAAAAAATTGCACAGAAACTACCAGAGAAAAAAATACCTT 258809 Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTC--ATGTATCCACTT 33488 | || |||||| |||| | ||| || || | || | | | || ||||| || Sbjct 258808 CAACGCAAGCAAAAGCAACGATTCTTTCAGCAAA--CGAATCCGACGAATCGATCCATTT 258751 Query 33489 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33548 ||||||||| || ||||| | |||||| ||||| || || |||| ||| | | Sbjct 258750 CAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCATGAAACAAACG 258691 Query 33549 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 33608 || || ||| ||| | | ||| || || | | |||||||||||||| ||||| Sbjct 258690 ATTCTTCTCAACCGAATCGCTTATATACGTTTCAAGAAGGAGACTATACATTTCAGAATG 258631 Query 33609 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 33668 || || ||||| || || ||||| ||||| ||| | ||||| | || || ||||| Sbjct 258630 TATATTCTCAATCGCGATTTGAAAACCGTAAAAAGCACGCGCCTCTGAAACTTGAACTTC 258571 Query 33669 TGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 33728 | | |||| | | || | ||| || || || ||||| || || ||||| || Sbjct 258570 TTTCATGAATCTTCCAGCAAGATTCTCTAAAACGATGCCGTCGGATGCGGCGAAAAATGC 258511 Query 33729 CAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATC 33788 | || || || ||| | | |||| | |||| || ||||||| | | ||| Sbjct 258510 AAGAACGTGGGATACAAAGTGTCGTTCGCCGTCAGTTAAATTGTTCCAATGTTGAAGATC 258451 Query 33789 TTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTT 33848 || |||| ||| |||||||| | ||||| ||||| || || || ||||| ||||| | Sbjct 258450 TTGTGATAAATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACATTTC 258391 Query 33849 CCAGATGTCATAATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAG 33905 ||| || | | |||| |||||||| ||| ||| | | ||| ||||| ||||| Sbjct 258390 CCAAATTTTAGGGTATTCAATTGGGAACATACAAAAACGGTCTGGGTTTGGAGCAAG 258334 >seq104 Length=244920 Score = 129 bits (142), Expect = 7e-25 Identities = 236/345 (68%), Gaps = 7/345 (2%) Strand=Plus/Plus Query 33301 AAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTG 33360 ||||| |||||||| || || || || ||||| | ||| || ||||| ||||| || Sbjct 172064 AAACAAGCGAAATCACAATGAAGTCCTTCGTCACACAAAATAAGCTCGTTTGAAAAAGTT 172123 Query 33361 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAG 33420 | || |||||| ||||| ||||||||||||||||| | | || | ||| || Sbjct 172124 AAACCATGCATTAAACCACGTTTTTTAAGCCAAAATATCGCACATAAACTACTAGAGAAA 172183 Query 33421 AAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCA---TAACCGGCGCTGTCA 33477 || || ||||| || |||||| |||| | ||| || || || || || | Sbjct 172184 AAAATACCTTCAACGCAAGCAAAAGCAACGATTCTTTCAACAATCAAATCGACG----AA 172239 Query 33478 TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCA 33537 | ||||| || ||||||||| || ||||| | |||||| ||||| || || ||| Sbjct 172240 TCGATCCATTTCAAAGCCCAATCCGCTTTCTTACGAATACAAGGAATCGTCTCAATAGCA 172299 Query 33538 TTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATAC 33597 | ||| | | | || || ||| ||| | | ||| || || | | ||||||||| Sbjct 172300 TGAAACAAACAATTCTTCTCAACCAAATCGCTTATATATGTTTCAAGAAGGAGACTATAC 172359 Query 33598 ATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 33642 ||||| ||||| || || ||||| || || || || | ||||||| Sbjct 172360 ATTTCAGAATGTATATTCTCAATCGCGATTTGGAACCTGTAGAAA 172404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622891703191320