Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2 109 5e-19 seq6 95.1 1e-14 seq4 82.4 7e-11 >seq2 Length=36634854 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | || || ||||| |||| || ||| | |||||| |||| | ||||| Sbjct 8273354 AAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACAATCACCCTCGAGGTTGAATCC 8273413 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 ||||| ||||| | |||||| || || ||||| |||||||| || || || Sbjct 8273414 TCTGACACAATCGACAACGTCAAAGCCAAAATCCAAGACAAGGAAGGGATTCCACCGGAC 8273473 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 |||||| ||||||| | || ||| |||||||||||||| | | | || |||||| Sbjct 8273474 CAACAACGACTCATCTTCGCCGGAAAACAACTCGAAGACGGCCGCACTCTCGCCGACTAC 8273533 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || ||||| ||| | || || || || Sbjct 8273534 AACATCCAGAAGGAATCAACTCTTCACCTTGTTCT 8273568 >seq6 Length=59463898 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || |||||||| || || ||| | |||||| | || | || | Sbjct 20997063 ATGCAAATCTTCGTGAAAACATTGACCGGCAAAACCATCACCCTTGAGGTGGAGAGTTCC 20997122 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | || ||| ||||| ||||| |||||||| || || |||||| Sbjct 20997123 GATACCATAGACAACGTGAAAGCTAAGATCCAAGACAAGGAAGGGATCCCACCAGATCAA 20997182 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||||| || | || ||| |||||| | ||||||| | | | | || || ||| Sbjct 20997183 CAAAGACTTATCTTCGCCGGTAAACAATTAGAAGATGGCCGTACCCTTGCTGATTACAAC 20997242 Query 26949 ATTCAAAAAGAATCTAC 26965 || ||||||||||| || Sbjct 20997243 ATCCAAAAAGAATCCAC 20997259 >seq4 Length=49191682 Score = 82.4 bits (90), Expect = 7e-11 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||||||| | || ||| ||||| ||||| ||||| || || || || || Sbjct 14093483 CGACACCATCGATAACGTTAAAGCCAAGATCCAAGACAAGGAAGGAATTCCCCCGGACCA 14093424 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || ||||| || | || ||| || ||||| || || | | | | | || |||||| || Sbjct 14093423 GCAGAGACTTATCTTCGCCGGAAAGCAACTTGAGGACGGTCGTACCCTCGCCGACTACAA 14093364 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || |||||||| | ||||| ||||| | ||| | ||||| Sbjct 14093363 TATCCAGAAGGAATCTACCCTTCATCTCGTCCTCCGTCTTCGTGGAGG 14093316 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| |||| || ||| | || || | ||| ||||||| | Sbjct 19846855 ATGCAGATCTTCGTCAAAACCCTAACCGGCAAAACCATAACGCTAGAAGTAGAATCCTCC 19846796 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || ||| || || ||||||||||| || || || ||||| Sbjct 19846795 GACACAATCGACAACGTGAAAGCCAAAATCCAAGACAAAGAAGGAATTCCACCGGATCAG 19846736 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-ACGT-CAGCGACTATA 26946 || | | || | || ||| ||||| | ||||| | |||| || | || || |||| Sbjct 19846735 CAGCGGTTGATCTTCGCCGGAAAACAGTTAGAAGACGGGAGAACACTTGCA--GATTATA 19846678 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 | ||||| ||||| ||||| | ||||| || || || || | || |||| Sbjct 19846677 ATATTCAGAAAGAGTCTACGCTTCATCTTGTTCTTAGGCTCCGTGGTGGAA 19846627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478619757163440