Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5 114 3e-20 seq6 113 1e-19 >seq5 Length=48169137 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| || ||| || ||||| || | ||| ||| | ||| | |||||| ||||| Sbjct 35185591 ATGAAAGATGATAGTATTGAGGGGATTTATGATACATTGAAGGAGTGTGCTATTATTAGT 35185650 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATT 363741 || |||||| ||||||||||| || || || || | ||||| || ||||||||| Sbjct 35185651 AAATCTGCAGGAGGAATTGGTGTTTCTATTCATAACATACGTGCCCATGGTAGTTACATT 35185710 Query 363742 CGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACT 363801 || || ||| || || ||||| | ||||| ||||| ||||||||| | | ||| Sbjct 35185711 CGTGGAACAAATGGGACGTCTAATGGTATTGTTCCAATGCTGCGTGTGTTTAATGACACT 35185770 Query 363802 GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839 || | || || || ||||||||||| ||| | ||||| Sbjct 35185771 GCCCGCTATGTTGATCAGGGTGGAGGCAAGAGGAAAGG 35185808 Score = 96.9 bits (106), Expect = 9e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 111702 CAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATT 111761 ||||| |||||| | ||| | | ||||| ||||||||||||||||||||||| || Sbjct 30757851 CAGTTCTATGTAGCAAATGGGGAGTTATCATGTCAAATGTATCAGCGATCTGCTGACATG 30757910 Query 111762 GGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCAT 111821 || || ||||| || |||||||||||| ||| || || || || ||| | || |||||| Sbjct 30757911 GGCCTGGGTGTGCCATTTAATATTGCATCTTATGCCCTCCTGACATGCATGATTGCTCAT 30757970 Query 111822 TTT 111824 || Sbjct 30757971 ATT 30757973 >seq6 Length=59463898 Score = 113 bits (124), Expect = 1e-19 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| || ||| || ||||| || | ||| || | ||| | |||||| ||||| Sbjct 7426726 ATGAAAGATGATAGTATTGAGGGGATTTATGATACTTTGAAGGAGTGTGCTGTTATTAGT 7426785 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATT 363741 || |||||| ||||||||||| || | || || | |||||||| ||||||||| Sbjct 7426786 AAATCTGCAGGAGGAATTGGTGTTTCTGTTCATAACATACGTGCACATGGTAGTTACATT 7426845 Query 363742 CGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 || || || | |||| | || ||||| | ||||| ||||| ||||||||| | | || Sbjct 7426846 CGAGGAACAAATGGGACA-TCTAATGGTATTGTTCCAATGCTCCGTGTGTTTAATGACAC 7426904 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839 ||| | || || || ||||||||||| ||| | ||||| Sbjct 7426905 TGCCCGCTATGTTGATCAGGGTGGAGGCAAGAGGAAAGG 7426943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303234584673314